BLASTX nr result

ID: Cimicifuga21_contig00019075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019075
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                199   7e-52
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]   116   3e-42
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]   167   2e-39
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   164   3e-39
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]   159   4e-38

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  199 bits (505), Expect(2) = 7e-52
 Identities = 119/354 (33%), Positives = 183/354 (51%), Gaps = 7/354 (1%)
 Frame = +1

Query: 79   YDLVGFVDGSNPCPPKYTRDNTGAFTTTVNPKFVEWTKKDQNLLVWLNTSIFESLLPYVV 258
            + L+G V+G + CPP + RD +G  T   N  F  W ++DQ L++W+N+++ + LLP  +
Sbjct: 297  FKLIGLVNGEDLCPPPFVRDPSG--TCVPNASFETWCERDQILMIWINSTLSKDLLPLTI 354

Query: 259  GVSTSRDLWNCLEKRFSSISRSHIIQLKTKLQGIKKGNSSMVDYLQSFKEVSNTFAAAGS 438
            G+  SR LW  LE+RFS  SR+H+  L++K+Q I KG+SSM D+L S KE+SN  AAAG 
Sbjct: 355  GMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGE 414

Query: 439  PVEDNYLLMYILNGLPAEYDPFATSIRIQADLITIDVXXXXXXXXXXXXXXRQQSLLHTA 618
            P+ ++ L+ YIL+GLP EY+ F  SI  + + +T D               R+     ++
Sbjct: 415  PLSESDLVAYILSGLPDEYESFVDSIETRNESVTADELHGLLLSKEISLQKRKTRASSSS 474

Query: 619  NSSQAFTANRSTDSFSSHYRGSNRGILSNKGRXXXXXXXXXXXXXXXXXXXXXXXXXNQM 798
            N+     A +S+       +G++RG   N+ R                            
Sbjct: 475  NAPFHAYAAQSSTHVGHFNKGNSRGRFHNRNRYTQNRNFGGNKPHNWHANNSGGILGAGP 534

Query: 799  FR-------PSGNKPQCQICDRLGYLAIDCYDRMNYAYQGKIPPQKLQAMVDDRXXXXXX 957
             R        SG   QCQ+C + G+ A  C +R++   Q +  P  + AM          
Sbjct: 535  SRQPAGPSSSSGCSVQCQLCLQYGHWAPMC-NRLSQFAQSQ-SPTAMSAMTSS------- 585

Query: 958  XXXXXXXHWITDSGASNHMTANLNNIHLYDSYSGSDQVHVGDGQALNISHTGHA 1119
                   +W+TDSGAS+H+T + + ++    YSG+DQ+ VGDG+ L ISHTG A
Sbjct: 586  ---ASPSYWLTDSGASHHVTPDPSALNSAIPYSGNDQLFVGDGKGLCISHTGSA 636



 Score = 33.1 bits (74), Expect(2) = 7e-52
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +2

Query: 2   SNLVPIKLSKDNYVLWKLIFMPIL 73
           + +VP KL++ NY+ W+ +F+P+L
Sbjct: 271 AGMVPTKLNRQNYITWRSLFIPVL 294



 Score =  100 bits (248), Expect = 1e-18
 Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 9/125 (7%)
 Frame = +2

Query: 1109 QDMQTGRIFFQGPHKHGLYYFFSNISSSLSTFLGEKTSTTV-------WHQRIGHPTASI 1267
            +D+ TG++ FQGP + GLY F+ N S+ +S      T+  +       WH+R+GHP+   
Sbjct: 684  KDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGT 743

Query: 1268 FHKVLKQ--VPVTPGDTTTKFCSYCQFGKSKKLPFTTSESKTTAPLQIIHTDFWGPSPVS 1441
             H V+ +  +PV         C+ CQ GKS +L F+T    ++ PLQ++HTD WGPSP S
Sbjct: 744  LHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPTS 803

Query: 1442 SISGF 1456
            S +G+
Sbjct: 804  SCTGY 808


>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
          Length = 1207

 Score =  116 bits (291), Expect(3) = 3e-42
 Identities = 101/355 (28%), Positives = 159/355 (44%), Gaps = 11/355 (3%)
 Frame = +1

Query: 82   DLVGFVDGSNPCPPKYTRDNTGAFTTTVNPKFVEWTKKDQNLLVWLNTSIFESLLPYVVG 261
            DL+G+VDG+    P++        +T ++ K++ W   DQ LL  L +S+ E  +  VVG
Sbjct: 42   DLLGYVDGTLVPLPRFEP----VTSTILSTKYLAWKAADQRLLCLLLSSLTEEAIATVVG 97

Query: 262  VSTSRDLWNCLEKRFSSISRSHIIQLKTKLQGIKKGNSSMVDYLQSFKEVSNTFAAAGSP 441
            +ST+R++W  LE  FS  S++  ++LK  LQ +K+    + ++ ++FK + +   A G P
Sbjct: 98   LSTAREVWLALENTFSHHSKARELRLKDDLQLMKRSTKPVAEHARTFKTLCDQLHAIGRP 157

Query: 442  VEDNYLLMYILNGLPAEYDPFATSIRIQADLITIDVXXXXXXXXXXXXXXRQQSLLHTAN 621
            VED   + + L GL  ++  F+T+       +T+                 Q+SL  +  
Sbjct: 158  VEDTDKVHWFLRGLGTDFSSFSTA----QMALTLLPYFADLVSKAESFELFQRSLESSEP 213

Query: 622  SSQAFTA-NRSTD-------SFSSHYRG---SNRGILSNKGRXXXXXXXXXXXXXXXXXX 768
            ++ AFTA NRS         +F S+ RG   S+    SN+GR                  
Sbjct: 214  TTTAFTATNRSRTTSHGTPFAFRSNQRGRSHSHNNNSSNRGRTYSGHGR----------- 262

Query: 769  XXXXXXXNQMFRPSGNKPQCQICDRLGYLAIDCYDRMNYAYQGKIPPQKLQAMVDDRXXX 948
                       RP    P+CQIC   G+ A    DR N  Y          A + +    
Sbjct: 263  -----------RP----PRCQICRIEGHYA----DRCNQQY----ARTDSSAHLAEAFNT 299

Query: 949  XXXXXXXXXXHWITDSGASNHMTANLNNIHLYDSYSGSDQVHVGDGQALNISHTG 1113
                       W  D+GAS HMT + + +    +Y G D V VG+G +L I+HTG
Sbjct: 300  SCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGASLPITHTG 354



 Score = 75.5 bits (184), Expect(3) = 3e-42
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
 Frame = +2

Query: 1121 TGRIFFQGPHKHGLYYFFSNISSSLSTFLGE--KTSTTVWHQRIGHPTASIFHKVLK--Q 1288
            TGR+   G    GLY    + S+ +S    +  + S  +WH R+GH   S+   + K  Q
Sbjct: 353  TGRVVATGKRDGGLYVLERDNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKXQ 412

Query: 1289 VPVTPGDTTTKFCSYCQFGKSKKLPFTTSESKTTAPLQIIHTDFWGPSPVSSISGF 1456
            + +T    +   CS CQF K+ +LP++ +E +++  L +IH D WGPSP+ S S F
Sbjct: 413  LSLTSLLPSPSLCSTCQFAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSSF 468



 Score = 28.5 bits (62), Expect(3) = 3e-42
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 5  NLVPIKLSKDNYVLWKLIFMPIL 73
          +++ I+LS  NY+LWK   +P+L
Sbjct: 16 HMITIELSSSNYLLWKSQLLPLL 38


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score =  167 bits (423), Expect(2) = 2e-39
 Identities = 105/350 (30%), Positives = 167/350 (47%), Gaps = 10/350 (2%)
 Frame = +1

Query: 94   FVDGSNPCPPKYTRDNTGAFTTTVNPKFVEWTKKDQNLLVWLNTSIFESLLPYVVGVSTS 273
            F+DG + CP K            +NP FV W ++D+ +L WL +S+  +++  ++G ++S
Sbjct: 906  FIDGFSICPDKELSSGL------INPAFVAWRRQDRTILSWLYSSLTPAIMAQIIGHNSS 959

Query: 274  RDLWNCLEKRFSSISRSHIIQLKTKLQGIKKGNSSMVDYLQSFKEVSNTFAAAGSPVEDN 453
               WN LEK FSS SR+ I+QL+ +LQ  KKG+ SM+DY+   K  +++ AA G PV + 
Sbjct: 960  HSAWNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIGEPVSEQ 1019

Query: 454  YLLMYILNGLPAEYDPFATSIRIQADLITIDVXXXXXXXXXXXXXXRQQSLLHTANSSQA 633
              +M +L GL ++Y+   T+I I+ D I+I+                 +  L   +S + 
Sbjct: 1020 DQVMNLLGGLGSDYNAVVTAINIRDDKISIEAVHSMLLAF--------EHRLEQQSSIKQ 1071

Query: 634  FTANRSTDSFSSHYRGSNRGILSNKGRXXXXXXXXXXXXXXXXXXXXXXXXXNQMFRPSG 813
            F+   +  + SS+ RG  R    N GR                          +    S 
Sbjct: 1072 FSPISANYASSSNNRGGGRRY--NGGRGQNHTPNISNYTYRGCGRGGRYGQNGRHNSNSS 1129

Query: 814  NKPQCQICDRLGYLAIDCYDRMNYAYQGKIP----------PQKLQAMVDDRXXXXXXXX 963
             KPQCQ+C + G+    CY R + +YQ              P  + AMV           
Sbjct: 1130 EKPQCQLCGKFGHTVQICYHRFDISYQSSQSSNTSPSNAGNPNSIPAMVASSNNLADDT- 1188

Query: 964  XXXXXHWITDSGASNHMTANLNNIHLYDSYSGSDQVHVGDGQALNISHTG 1113
                  W  DSGAS+H+T ++ N+     Y+G D+V +G+G+ L+IS+TG
Sbjct: 1189 ------WYLDSGASHHLTQSVGNLTSSSPYTGIDKVTIGNGKHLSISNTG 1232



 Score = 23.5 bits (49), Expect(2) = 2e-39
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 17  IKLSKDNYVLWK 52
           +KL + NY+LWK
Sbjct: 880 VKLDRTNYILWK 891


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  164 bits (415), Expect(2) = 3e-39
 Identities = 104/350 (29%), Positives = 166/350 (47%), Gaps = 10/350 (2%)
 Frame = +1

Query: 94   FVDGSNPCPPKYTRDNTGAFTTTVNPKFVEWTKKDQNLLVWLNTSIFESLLPYVVGVSTS 273
            F+DG++ CP K            +NP FV W ++D+ +L W+ +S+   ++  ++G +TS
Sbjct: 64   FIDGTSICPEKDLSPGV------MNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTS 117

Query: 274  RDLWNCLEKRFSSISRSHIIQLKTKLQGIKKGNSSMVDYLQSFKEVSNTFAAAGSPVEDN 453
               WN LE  FSS SR+ I+QL+ +LQ  KKG+ SM+DY+   K  ++  AA G PV + 
Sbjct: 118  HSAWNALESIFSSSSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQ 177

Query: 454  YLLMYILNGLPAEYDPFATSIRIQADLITIDVXXXXXXXXXXXXXXRQQSLLHTANSSQA 633
              +M +L GL ++Y+   T+I I+ D I+++                 +  L   +S + 
Sbjct: 178  DQVMNLLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLAF--------EHRLEQQSSIEQ 229

Query: 634  FTANRSTDSFSSHYRGSNRGILSNKGRXXXXXXXXXXXXXXXXXXXXXXXXXNQMFRPSG 813
             +AN ++   SS+ RG  R    N GR                          +      
Sbjct: 230  MSANYAS---SSNNRGGGRKF--NGGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPS 284

Query: 814  NKPQCQICDRLGYLAIDCYDRMNYAYQGKIPP----------QKLQAMVDDRXXXXXXXX 963
             KPQCQ+C + G+ A  CY R + ++QG                + AMV           
Sbjct: 285  EKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADES 344

Query: 964  XXXXXHWITDSGASNHMTANLNNIHLYDSYSGSDQVHVGDGQALNISHTG 1113
                  W  DSGAS+H+T NL N+     Y+G+D+V +G+G+ L+IS+ G
Sbjct: 345  ------WYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNIG 388



 Score = 25.8 bits (55), Expect(2) = 3e-39
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 2  SNLVPIKLSKDNYVLWK 52
          ++ +P+KL + NY+LW+
Sbjct: 33 NHTLPVKLDRTNYILWR 49



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
 Frame = +2

Query: 1109 QDMQTGRIFFQGPHKHGLYYF--FSNIS-----SSLSTFLGEKTSTT-----VWHQRIGH 1252
            +D+ T  +  QG  ++GLY F  FSN+      ++ S F  + +ST      +WH R+GH
Sbjct: 438  KDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHSQFSSTVENKAELWHNRLGH 497

Query: 1253 PTASIFHKVLKQVPVTPGDTTTKFCSYCQFGKSKKLPFTTSESKTTAPLQIIHTDFWGPS 1432
             +  I  KV+    V  G   +  CS CQ  KS +LP   S    + PL++++TD WGP+
Sbjct: 498  ASFDIVSKVMNTCNVASGKYKSFVCSDCQLAKSHRLPTQLSNFHASKPLELVYTDIWGPA 557

Query: 1433 PVSSISG 1453
             + S SG
Sbjct: 558  SIKSTSG 564


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score =  159 bits (402), Expect(2) = 4e-38
 Identities = 100/340 (29%), Positives = 159/340 (46%), Gaps = 10/340 (2%)
 Frame = +1

Query: 94   FVDGSNPCPPKYTRDNTGAFTTTVNPKFVEWTKKDQNLLVWLNTSIFESLLPYVVGVSTS 273
            F+DGS+ CP K            +NP FV W ++D+ +L WL +S+  + +  ++G ++ 
Sbjct: 61   FIDGSSICPDKELXSGL------INPAFVAWRRQDRTILSWLYSSLTPAXMAQIIGHNSX 114

Query: 274  RDLWNCLEKRFSSISRSHIIQLKTKLQGIKKGNSSMVDYLQSFKEVSNTFAAAGSPVEDN 453
               WN LEK FSS SR+ I+QL+ +LQ  KKG+ SM+DY+   K  +++ AA G PV + 
Sbjct: 115  HSAWNALEKTFSSSSRARIMQLRLELQSTKKGSXSMIDYIMKVKGAADSLAAIGEPVSEQ 174

Query: 454  YLLMYILNGLPAEYDPFATSIRIQADLITIDVXXXXXXXXXXXXXXRQQSLLHTANSSQA 633
              +M +L+GL ++Y+   T+I I+ D I+I+                 +  L   +S + 
Sbjct: 175  DQVMNLLDGLGSDYNAVVTAINIRDDKISIEAVHSMLLVF--------EHRLEQQSSIEQ 226

Query: 634  FTANRSTDSFSSHYRGSNRGILSNKGRXXXXXXXXXXXXXXXXXXXXXXXXXNQMFRPSG 813
            F+   +  + SS+ RG  R    N GR                          +    S 
Sbjct: 227  FSPISANYASSSNSRGGGRRY--NGGRGQNHTPNTSNYTYRGSGRGGRYGQNERHNSNSS 284

Query: 814  NKPQCQICDRLGYLAIDCYDRMNYAYQGK----------IPPQKLQAMVDDRXXXXXXXX 963
             KPQCQ+C + GY    CY R + +YQ              P  + AMV           
Sbjct: 285  EKPQCQLCGKFGYTVQICYHRFDISYQSSQSSNTSPSNASNPNSIPAMVASSNYLADDT- 343

Query: 964  XXXXXHWITDSGASNHMTANLNNIHLYDSYSGSDQVHVGD 1083
                  W  DSGAS+H+T ++ N+     Y+G+D+V +G+
Sbjct: 344  ------WYLDSGASHHLTQSVGNLTSSSPYTGTDKVTIGN 377



 Score = 26.9 bits (58), Expect(2) = 4e-38
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 2  SNLVPIKLSKDNYVLWK 52
          ++ +P+KL + NY+LWK
Sbjct: 30 NHTLPVKLDRTNYILWK 46



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +2

Query: 1238 QRIGHPTASIFHKVLKQVPVT----PGDTTTKFCSYCQFGKSKKLPFTTSESKTTAPLQI 1405
            +R+GH +  I  ++++   V+         +  CS CQ  KS +LP   S S  + PL++
Sbjct: 406  ERLGHASTDIVTQIMQSCNVSFEKNKNTVCSTVCSSCQLAKSHRLPTHLSLSCASKPLEL 465

Query: 1406 IHTDFWGPSPVSSISG 1453
            +H D WGP+PV S SG
Sbjct: 466  VHXDLWGPAPVKSTSG 481


Top