BLASTX nr result
ID: Cimicifuga21_contig00019041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00019041
(864 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309467.1| f-box family protein [Populus trichocarpa] g... 357 1e-96
ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ... 349 5e-94
emb|CBI20722.3| unnamed protein product [Vitis vinifera] 349 5e-94
ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm... 339 4e-91
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2... 332 7e-89
>ref|XP_002309467.1| f-box family protein [Populus trichocarpa]
gi|222855443|gb|EEE92990.1| f-box family protein [Populus
trichocarpa]
Length = 895
Score = 357 bits (917), Expect = 1e-96
Identities = 182/288 (63%), Positives = 221/288 (76%)
Frame = +1
Query: 1 DLEVRMDLPDDLWHRVLSLLDTIGLCRAAAVCPRWRTASSNEELWRHLNFEGQNITEAQF 180
DLEVRMDL DDL H V S LD I LCRAA VC +WR AS++E+ WR LNFE +NI+ QF
Sbjct: 160 DLEVRMDLTDDLLHMVFSFLDPINLCRAAMVCRQWRAASAHEDFWRCLNFENRNISVEQF 219
Query: 181 ADIGHRYPNATEVNLFGAPVTHLLVVKTLYSLRNLETLTVGKGNLDTAFLGALGDHAALK 360
D+ RYPNATEVN++GAP HLLV+K L+SLRNLETLTVGKG L F GALGD LK
Sbjct: 220 EDMSRRYPNATEVNIYGAPAIHLLVMKALFSLRNLETLTVGKGQLGDPFFGALGDCIMLK 279
Query: 361 SLSIMKATLVNVSMYQQVPVYHDSLRIFKIINCRLPRLSMRCPQLQVLSMKGSNMKSAHL 540
SL++ ATL S Q++P+ HD L ++ CR+ R+S+RCPQL+ LS+K SNM A L
Sbjct: 280 SLNVNDATLG--SGIQEIPINHDRLCHLQLTKCRVMRISVRCPQLETLSLKRSNMAQAVL 337
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+CP L LD+GSCH L+ +IR AA SCP L+SLD SNCS V+++++REIALTC +L L
Sbjct: 338 NCPLLRLLDIGSCHKLTDAAIRSAAISCPQLESLDMSNCSCVSDETLREIALTCANLHIL 397
Query: 721 NVSYCPKISLESVRMPMVTVLKLNNCERITSASMVAISHSYMLEVLEL 864
N SYCP ISLESVRMPM+TVLKL++CE ITSASM AI++SYMLEVLEL
Sbjct: 398 NASYCPNISLESVRMPMLTVLKLHSCEGITSASMSAIAYSYMLEVLEL 445
Score = 57.8 bits (138), Expect = 3e-06
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Frame = +1
Query: 355 LKSLSIMKATLVNVSMYQQVPVYHDSLRIFKIINCR-LPRLSMRCPQLQVLSMKGSNMKS 531
LKSL L N V + SL ++ CR + L + CP L+++ + G +
Sbjct: 552 LKSL-----VLDNCEALTAVRFHSTSLVSLSLVGCRAITALDLACPSLELVCLDGCDHLE 606
Query: 532 AHLDCPQLLE-LDVGSCHHLSSTSIRI----------------AATSCPLLKSLDASNCS 660
CP L L++G C L SI A+ +CPLL SLDAS CS
Sbjct: 607 EASFCPVALRSLNLGICPKLKILSIEAPCMVSLELKGCGVLSEASINCPLLTSLDASFCS 666
Query: 661 QVTEKSIREIALTCGHLRALNVSYCPKISLESV----RMPMVTVLKLN 792
Q+ + + +C + +L + CP + + + R+P ++VL L+
Sbjct: 667 QLKDDCLSATTASCPLIGSLILMSCPSVGSDGLLSLQRLPHLSVLDLS 714
>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
Length = 922
Score = 349 bits (895), Expect = 5e-94
Identities = 179/288 (62%), Positives = 216/288 (75%)
Frame = +1
Query: 1 DLEVRMDLPDDLWHRVLSLLDTIGLCRAAAVCPRWRTASSNEELWRHLNFEGQNITEAQF 180
DLEVRMDL DDL H V S LD I LCRAA VC +WR SS+E+ WR LNFE +NI+E QF
Sbjct: 190 DLEVRMDLTDDLLHMVFSFLDHINLCRAAIVCKQWRAGSSHEDFWRCLNFENRNISEEQF 249
Query: 181 ADIGHRYPNATEVNLFGAPVTHLLVVKTLYSLRNLETLTVGKGNLDTAFLGALGDHAALK 360
D+ RYPNATEVN+FGAP H LV+ + SLRNLETLT+GKG L F AL D LK
Sbjct: 250 EDMCRRYPNATEVNIFGAPSIHSLVMTAMSSLRNLETLTLGKGTLGDTFFQALADCYMLK 309
Query: 361 SLSIMKATLVNVSMYQQVPVYHDSLRIFKIINCRLPRLSMRCPQLQVLSMKGSNMKSAHL 540
L + ATL N Q++P+YHD L +I CR+ R+S+RCPQL+ LS+K S+M A L
Sbjct: 310 RLLVNDATLGNG--IQEIPIYHDRLHHLQITKCRVLRISVRCPQLETLSLKRSSMAHAVL 367
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+CP L +LD+GSCH L+ +IR AATSCPLL+SLD SNCS V++ ++REIALTC +L L
Sbjct: 368 NCPLLHDLDIGSCHKLTDAAIRSAATSCPLLESLDMSNCSCVSDDTLREIALTCANLHIL 427
Query: 721 NVSYCPKISLESVRMPMVTVLKLNNCERITSASMVAISHSYMLEVLEL 864
+ SYCP ISLESVR+ M+TVLKL++CE ITSASM AISHSYMLEVLEL
Sbjct: 428 DASYCPNISLESVRLSMLTVLKLHSCEGITSASMAAISHSYMLEVLEL 475
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 27/148 (18%)
Frame = +1
Query: 430 SLRIFKIINCR-LPRLSMRCPQLQVLSMKGSN----------------------MKSAHL 540
SL ++ CR + L + CP L+ + + G + + + H+
Sbjct: 602 SLVSLSLVGCRAITSLELVCPYLEQVHLDGCDHLERASFRPVGLRSLNLGICPKLSALHI 661
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+ P +++L++ C LS SI +CP+L SLDAS CS++ + + A +C + +L
Sbjct: 662 EAPSMVQLELKGCGGLSEASI-----NCPMLTSLDASFCSKLKDDCLSATAASCPFIESL 716
Query: 721 NVSYCPKISLESVR----MPMVTVLKLN 792
+ CP + E + +P +T+L L+
Sbjct: 717 ILMSCPSVGYEGLSSLRLLPHLTLLDLS 744
>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
Length = 957
Score = 349 bits (895), Expect = 5e-94
Identities = 179/288 (62%), Positives = 216/288 (75%)
Frame = +1
Query: 1 DLEVRMDLPDDLWHRVLSLLDTIGLCRAAAVCPRWRTASSNEELWRHLNFEGQNITEAQF 180
DLEVRMDL DDL H V S LD I LCRAA VC +WR SS+E+ WR LNFE +NI+E QF
Sbjct: 156 DLEVRMDLTDDLLHMVFSFLDHINLCRAAIVCKQWRAGSSHEDFWRCLNFENRNISEEQF 215
Query: 181 ADIGHRYPNATEVNLFGAPVTHLLVVKTLYSLRNLETLTVGKGNLDTAFLGALGDHAALK 360
D+ RYPNATEVN+FGAP H LV+ + SLRNLETLT+GKG L F AL D LK
Sbjct: 216 EDMCRRYPNATEVNIFGAPSIHSLVMTAMSSLRNLETLTLGKGTLGDTFFQALADCYMLK 275
Query: 361 SLSIMKATLVNVSMYQQVPVYHDSLRIFKIINCRLPRLSMRCPQLQVLSMKGSNMKSAHL 540
L + ATL N Q++P+YHD L +I CR+ R+S+RCPQL+ LS+K S+M A L
Sbjct: 276 RLLVNDATLGNG--IQEIPIYHDRLHHLQITKCRVLRISVRCPQLETLSLKRSSMAHAVL 333
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+CP L +LD+GSCH L+ +IR AATSCPLL+SLD SNCS V++ ++REIALTC +L L
Sbjct: 334 NCPLLHDLDIGSCHKLTDAAIRSAATSCPLLESLDMSNCSCVSDDTLREIALTCANLHIL 393
Query: 721 NVSYCPKISLESVRMPMVTVLKLNNCERITSASMVAISHSYMLEVLEL 864
+ SYCP ISLESVR+ M+TVLKL++CE ITSASM AISHSYMLEVLEL
Sbjct: 394 DASYCPNISLESVRLSMLTVLKLHSCEGITSASMAAISHSYMLEVLEL 441
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 27/148 (18%)
Frame = +1
Query: 430 SLRIFKIINCR-LPRLSMRCPQLQVLSMKGSN----------------------MKSAHL 540
SL ++ CR + L + CP L+ + + G + + + H+
Sbjct: 568 SLVSLSLVGCRAITSLELVCPYLEQVHLDGCDHLERASFRPVGLRSLNLGICPKLSALHI 627
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+ P +++L++ C LS SI +CP+L SLDAS CS++ + + A +C + +L
Sbjct: 628 EAPSMVQLELKGCGGLSEASI-----NCPMLTSLDASFCSKLKDDCLSATAASCPFIESL 682
Query: 721 NVSYCPKISLESVR----MPMVTVLKLN 792
+ CP + E + +P +T+L L+
Sbjct: 683 ILMSCPSVGYEGLSSLRLLPHLTLLDLS 710
>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
gi|223544620|gb|EEF46136.1| conserved hypothetical
protein [Ricinus communis]
Length = 997
Score = 339 bits (870), Expect = 4e-91
Identities = 175/288 (60%), Positives = 215/288 (74%)
Frame = +1
Query: 1 DLEVRMDLPDDLWHRVLSLLDTIGLCRAAAVCPRWRTASSNEELWRHLNFEGQNITEAQF 180
DLEVRMDL DDL H V S LD + LCRAA VC +WR AS++E+ WR LNFE +NI+ QF
Sbjct: 193 DLEVRMDLTDDLLHMVFSFLDHLNLCRAAMVCRQWRAASAHEDFWRCLNFENRNISIEQF 252
Query: 181 ADIGHRYPNATEVNLFGAPVTHLLVVKTLYSLRNLETLTVGKGNLDTAFLGALGDHAALK 360
D+ RYPNATEVN++ AP HLLV+K L SLRNLE LT+G+G L F AL D + LK
Sbjct: 253 DDMCRRYPNATEVNIYSAPNIHLLVMKALSSLRNLEVLTLGRGQLGDPFFHALADCSMLK 312
Query: 361 SLSIMKATLVNVSMYQQVPVYHDSLRIFKIINCRLPRLSMRCPQLQVLSMKGSNMKSAHL 540
SL + ATL N ++P+ HD LR ++I CR+ R+S+RCPQL+ LS+K SNM A L
Sbjct: 313 SLYVNDATLGNG--VHEIPINHDRLRHLQLIKCRVVRISVRCPQLETLSLKRSNMAQAVL 370
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+CP L LD+GSCH LS +IR AA SCP L+SLD SNCS V+++++REIA TC +L L
Sbjct: 371 NCPLLRLLDIGSCHKLSDAAIRSAAISCPQLESLDMSNCSCVSDETLREIAATCVNLHIL 430
Query: 721 NVSYCPKISLESVRMPMVTVLKLNNCERITSASMVAISHSYMLEVLEL 864
N SYCP ISLESVR+PM+TVLKL++CE ITSASM AI+HS MLEVLEL
Sbjct: 431 NASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSSMLEVLEL 478
Score = 58.5 bits (140), Expect = 2e-06
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 41/193 (21%)
Frame = +1
Query: 367 SIMKATLVNVSMYQQVPVYHDSLRIFKIINC-RLPRLSMRCPQLQVLSM-KGSNMKSAHL 540
S+ LV+ + + + L + NC L R+++ LQ L++ K N+ + L
Sbjct: 493 SLQNIRLVHCRKFADLNLRSTKLSSIMVSNCPALHRINIMSNSLQKLALQKQENLTALAL 552
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATS--CPLLKSLDASNCSQVTE-------------- 672
C L E+D+ C L+++ + + CP+LKSL NC +T
Sbjct: 553 QCQFLQEVDLTDCESLTNSICEVFSDGGGCPMLKSLVLDNCESLTAVQFCSTSLVSLSLV 612
Query: 673 --KSIREIALTCG---------------------HLRALNVSYCPKISLESVRMPMVTVL 783
++I + LTC LR+LN+ CPK+++ ++ P + +L
Sbjct: 613 GCRAITALELTCPCLEKVCLDGCDHLERASFSPVALRSLNLGICPKLNILNIEAPYMLLL 672
Query: 784 KLNNCERITSASM 822
+L C ++ AS+
Sbjct: 673 ELKGCGVLSEASI 685
>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
predicted protein [Populus trichocarpa]
Length = 957
Score = 332 bits (851), Expect = 7e-89
Identities = 168/288 (58%), Positives = 216/288 (75%)
Frame = +1
Query: 1 DLEVRMDLPDDLWHRVLSLLDTIGLCRAAAVCPRWRTASSNEELWRHLNFEGQNITEAQF 180
DL+VRMDL DDL H V S LD I LCRAA VC +W+ AS++E+ WR L+FE +NI+ QF
Sbjct: 156 DLDVRMDLTDDLLHMVFSFLDHINLCRAAMVCRQWQAASAHEDFWRCLDFENRNISVEQF 215
Query: 181 ADIGHRYPNATEVNLFGAPVTHLLVVKTLYSLRNLETLTVGKGNLDTAFLGALGDHAALK 360
D+ RYPNATEVN++GAP LLV+K + SLRNLE+LT+GKG L F ALGD + LK
Sbjct: 216 EDMSRRYPNATEVNIYGAPSIQLLVMKAVSSLRNLESLTLGKGQLGDPFFHALGDCSMLK 275
Query: 361 SLSIMKATLVNVSMYQQVPVYHDSLRIFKIINCRLPRLSMRCPQLQVLSMKGSNMKSAHL 540
+L++ ATL N Q++P+ HD L ++ CR+ R+S+RCPQL+ LS+K SNM A L
Sbjct: 276 NLNVNDATLGNG--IQEIPINHDRLCHLQLTKCRVMRISVRCPQLETLSLKRSNMAQAVL 333
Query: 541 DCPQLLELDVGSCHHLSSTSIRIAATSCPLLKSLDASNCSQVTEKSIREIALTCGHLRAL 720
+CP L LD+GSCH L+ +IR AA SCP L SLD SNCS V+++++REI+ TC +L L
Sbjct: 334 NCPLLRLLDIGSCHKLTDAAIRSAAISCPQLASLDMSNCSCVSDETLREISHTCANLHTL 393
Query: 721 NVSYCPKISLESVRMPMVTVLKLNNCERITSASMVAISHSYMLEVLEL 864
N SYCP ISLESVR+PM+T+LKL++CE ITSASM AI+HS +LEVLEL
Sbjct: 394 NASYCPNISLESVRLPMLTILKLHSCEGITSASMSAIAHSSLLEVLEL 441