BLASTX nr result

ID: Cimicifuga21_contig00019039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019039
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containin...    99   2e-18
ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216...    99   2e-18
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...    99   2e-18
emb|CBI29641.3| unnamed protein product [Vitis vinifera]               93   6e-17
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...    90   7e-16

>ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Cucumis sativus]
          Length = 838

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 560 KVLEEESRRNQIENGNKLEEDDDWEYVEEGPAEIIWQGNEIIXXXXXXXXXXXSADQQAS 739
           + LEEES   + EN N+  E+D WEY+E GPAEIIW+G EII           S + + S
Sbjct: 111 RALEEESTPREAENENEFNEEDGWEYIE-GPAEIIWKGEEIILKKKLIKVPKKSVEPEKS 169

Query: 740 IEDVNRPTSNPLPPQSEAYASYRNTFVSNQQ 832
            ED +RPTSNPLPPQSEA+  Y+NT +S +Q
Sbjct: 170 FEDAHRPTSNPLPPQSEAFTDYKNTPISTKQ 200


>ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
          Length = 867

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 560 KVLEEESRRNQIENGNKLEEDDDWEYVEEGPAEIIWQGNEIIXXXXXXXXXXXSADQQAS 739
           + LEEES   + EN N+  E+D WEY+E GPAEIIW+G EII           S + + S
Sbjct: 111 RALEEESTPREAENENEFNEEDGWEYIE-GPAEIIWKGEEIILKKKLIKVPKKSVEPEKS 169

Query: 740 IEDVNRPTSNPLPPQSEAYASYRNTFVSNQQ 832
            ED +RPTSNPLPPQSEA+  Y+NT +S +Q
Sbjct: 170 FEDAHRPTSNPLPPQSEAFTDYKNTPISTKQ 200


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 857

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
 Frame = +2

Query: 560 KVLEEE--SRRNQIENGNKLEEDDDWEYVEEGPAEIIWQGNEIIXXXXXXXXXXXSADQQ 733
           KVLE+E  +++ Q+E  N+  +DDDWEYVEEGPAEIIWQGNEII           SADQQ
Sbjct: 109 KVLEDEQDAKKFQVEKENEFNDDDDWEYVEEGPAEIIWQGNEII-VRKKKIPKKKSADQQ 167

Query: 734 ASIEDVNRPTSNPLPPQSEAYASYR 808
           +  ED +RPTSNPLPPQSEA+A Y+
Sbjct: 168 SRNED-DRPTSNPLPPQSEAFAEYQ 191


>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = +2

Query: 560 KVLEEESRRNQIENGNKLEEDDDWEYVEEGPAEIIWQGNEIIXXXXXXXXXXXSADQQA- 736
           K+LEE  ++ ++E  N+L EDDDWEY E GPAEIIWQGNEII             DQ + 
Sbjct: 93  KILEELEKK-EVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSR 150

Query: 737 SIEDVNRPTSNPLPPQSEAYASYRNTFVSNQQ 832
             ED  RPTSNPLPPQSEA++ +  + +S+QQ
Sbjct: 151 KEEDTERPTSNPLPPQSEAFSDHNASIISSQQ 182


>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
 Frame = +2

Query: 560 KVLEEESRRNQIENGNKLEEDDDWEYVEEGPAEIIWQGNEIIXXXXXXXXXXXSADQQAS 739
           K+LEE  ++ ++E  N+L EDDDWEY E GPAEIIWQGNEII             DQ + 
Sbjct: 88  KILEELEKK-EVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSR 145

Query: 740 IE---------DVNRPTSNPLPPQSEAYASYRNTFVSNQQ 832
            E         D  RPTSNPLPPQSEA++ +  + +S+QQ
Sbjct: 146 KEVLLRLFQLYDTERPTSNPLPPQSEAFSDHNASIISSQQ 185


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