BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019025
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   247   1e-63
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   244   9e-63
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   239   2e-61
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   235   3e-60
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   234   5e-60

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  247 bits (630), Expect = 1e-63
 Identities = 118/183 (64%), Positives = 145/183 (79%)
 Frame = +2

Query: 2   LKEMDPPSTLTCVLHPYQKQALYWMSESEKGVHVEQAAKTLHPCWAAYRLTDKKASSVYV 181
           L EM+PP TLTC L PYQKQAL+WMSE EKG+ VE+AA+TLHPCW+AYR+ D++A+S+YV
Sbjct: 442 LDEMEPPPTLTCDLRPYQKQALFWMSELEKGIDVEKAAQTLHPCWSAYRICDERATSIYV 501

Query: 182 NIFSGEATTRFPSATKMAKGGILADAMGLGKTVMTIALILTRSGKGVPDNEVVANNSKDA 361
           NIFSGE+TT+FP+AT+MA+GGILADAMGLGKTVMTIALIL R GKG PDN+    N K  
Sbjct: 502 NIFSGESTTKFPTATQMARGGILADAMGLGKTVMTIALILARMGKGCPDNQKSTVNKKVT 561

Query: 362 DREEGKHNKKQLQTKSTQTVKGGTLIVCPMALLGQWKDELDTHSRPGSLQVFVQYGVDRS 541
             ++ +        KST   +GGTLIVCPMALLGQWK+EL+ HS P S+ +FV YG DR+
Sbjct: 562 TEKKSQ--------KSTTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRT 613

Query: 542 GDP 550
            +P
Sbjct: 614 NNP 616


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  244 bits (622), Expect = 9e-63
 Identities = 120/188 (63%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
 Frame = +2

Query: 2    LKEMDPPSTLTCVLHPYQKQALYWMSESEKGVHVEQAAKTLHPCWAAYRLTDKKASSVYV 181
            L+EM+ PSTLTC L PYQKQALYWMSESEKG+ VE+AA+TLHPCW AYR+ D++A S+Y+
Sbjct: 603  LEEMEAPSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYL 662

Query: 182  NIFSGEATTRFPSATKMAKGGILADAMGLGKTVMTIALILTRSGKGVPDNEVVANNSKDA 361
            NIFSGEAT +FP+AT+MA+GGILADAMGLGKTVMTIALIL R G+G P+NE V     +A
Sbjct: 663  NIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNA 722

Query: 362  DREEGKHNKKQL-QTKSTQTVKGGTLIVCPMALLGQWKDELDTHSRPGSLQVFVQYGVDR 538
            D    K N+K++    +T   KGGTLI+CPMALL QWKDEL+THS+P ++ V V YG DR
Sbjct: 723  D----KRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDR 778

Query: 539  SGDPVSLS 562
            + D  +++
Sbjct: 779  THDAKAIA 786


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  239 bits (610), Expect = 2e-61
 Identities = 119/188 (63%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
 Frame = +2

Query: 2    LKEMDPPSTLTCVLHPYQKQALYWMSESEKGVHVEQAAKTLHPCWAAYRLTDKKASSVYV 181
            L+EM+ PSTLTC L PYQKQALYWMSESEKG+ VE+AA+TLHPCW AYR+ D++A S+Y+
Sbjct: 631  LEEMEAPSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYL 690

Query: 182  NIFSGEATTRFPSATKMAKGGILADAMGLGKTVMTIALILTRSGKGVPDNEVVANNSKDA 361
            NIFSGEAT +FP+AT+MA+GGILADAMGLGKTVMTIALIL R G+G P NE    +   A
Sbjct: 691  NIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPGNE----DGLAA 746

Query: 362  DREEGKHNKKQLQTKST-QTVKGGTLIVCPMALLGQWKDELDTHSRPGSLQVFVQYGVDR 538
            D    K  +K+  T  T    KGGTLI+CPMALL QWKDEL+THS+P ++ V V YG DR
Sbjct: 747  DVNADKRKRKESHTALTIVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDR 806

Query: 539  SGDPVSLS 562
            + D  +++
Sbjct: 807  THDAKAIA 814


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  235 bits (600), Expect = 3e-60
 Identities = 118/187 (63%), Positives = 141/187 (75%)
 Frame = +2

Query: 2    LKEMDPPSTLTCVLHPYQKQALYWMSESEKGVHVEQAAKTLHPCWAAYRLTDKKASSVYV 181
            L+EM+ PSTL C L PYQKQALYWMSE EKG   EQA KTLHPCWAAY++ D++AS++YV
Sbjct: 547  LEEMESPSTLMCDLRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDERASAIYV 606

Query: 182  NIFSGEATTRFPSATKMAKGGILADAMGLGKTVMTIALILTRSGKGVPDNEVVANNSKDA 361
            NIFSGEATT+ P+A  MA+GGILADAMGLGKTVMTIALIL R G+       +   + D 
Sbjct: 607  NIFSGEATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSGVHKLLTEAAD- 665

Query: 362  DREEGKHNKKQLQTKSTQTVKGGTLIVCPMALLGQWKDELDTHSRPGSLQVFVQYGVDRS 541
            D EE + N     TK+   VKGGTLIVCPMALL QWKDEL+THS+P S+ +F+ YG DR+
Sbjct: 666  DTEEAEKNTDS-HTKAPLNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRT 724

Query: 542  GDPVSLS 562
             DP  +S
Sbjct: 725  NDPKVIS 731


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score =  234 bits (598), Expect = 5e-60
 Identities = 117/187 (62%), Positives = 141/187 (75%)
 Frame = +2

Query: 2   LKEMDPPSTLTCVLHPYQKQALYWMSESEKGVHVEQAAKTLHPCWAAYRLTDKKASSVYV 181
           L+EM+PP TL C L  YQKQALYWMSE EKG+ VE+AAKTLHPCWAAYR+ D +ASS+Y+
Sbjct: 393 LEEMEPPHTLMCSLRSYQKQALYWMSECEKGIDVEKAAKTLHPCWAAYRICDARASSIYL 452

Query: 182 NIFSGEATTRFPSATKMAKGGILADAMGLGKTVMTIALILTRSGKGVPDNEVVANNSKDA 361
           NIFSGEATT+FP+AT+MA+GGILADAMGLGKTVMTI+LIL R GKG  D++         
Sbjct: 453 NIFSGEATTQFPTATQMARGGILADAMGLGKTVMTISLILARPGKGSIDSQ--------- 503

Query: 362 DREEGKHNKKQLQTKSTQTVKGGTLIVCPMALLGQWKDELDTHSRPGSLQVFVQYGVDRS 541
                       ++ +T+  KGGTLIVCPMALLGQWKDEL+THS  GS+ +FV YG  R+
Sbjct: 504 ------------ESTNTKKAKGGTLIVCPMALLGQWKDELETHSELGSISIFVHYGGFRT 551

Query: 542 GDPVSLS 562
            DP  +S
Sbjct: 552 TDPRVIS 558