BLASTX nr result

ID: Cimicifuga21_contig00019022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019022
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...    82   1e-13
emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]    82   1e-13
ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, ch...    81   1e-13
emb|CBI18834.3| unnamed protein product [Vitis vinifera]               81   1e-13
emb|CBI25886.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 555

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 61/178 (34%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
 Frame = -1

Query: 612 DLRDEQIDANESLNEAEDEEDGFTXXXXXXXXXXXXXXXXXXXXXXENQENVDGEESDSA 433
           DL++E++ A++ L+  ED+                           ++ EN    E  S 
Sbjct: 385 DLQEEEMGADKYLDNGEDD----VVDSLSGAEDDDMPSELPAEPVDDDDENDIVSELSSG 440

Query: 432 EEWKLVDD-QPDYSKGWKGLNDQLNDD-----------DPQGEKEFSDDVMINAESLGRD 289
           +  + +DD + DYS GW     + ++D           D Q  + F D  M   +S  + 
Sbjct: 441 DVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSRWKTMDDQQSESFKDRRMTEKDSCSQP 500

Query: 288 --VQTVETSAVMGVGLQELLSLIDEKLNNQNVVERRSSDTFSRKWRPPCKTDSGIAVE 121
             +  V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP   D G+AVE
Sbjct: 501 QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPPHTEDVGVAVE 555


>emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
          Length = 743

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 61/178 (34%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
 Frame = -1

Query: 612  DLRDEQIDANESLNEAEDEEDGFTXXXXXXXXXXXXXXXXXXXXXXENQENVDGEESDSA 433
            DL++E++ A++ L+  ED+                           ++ EN    E  S 
Sbjct: 573  DLQEEEMGADKYLDNGEDD----VVDSLSGAEDDDMPSELPAEPVDDDDENDIVSELSSG 628

Query: 432  EEWKLVDD-QPDYSKGWKGLNDQLNDD-----------DPQGEKEFSDDVMINAESLGRD 289
            +  + +DD + DYS GW     + ++D           D Q  + F D  M   +S  + 
Sbjct: 629  DVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSRWKTMDDQQSESFKDRRMTEKDSCSQP 688

Query: 288  --VQTVETSAVMGVGLQELLSLIDEKLNNQNVVERRSSDTFSRKWRPPCKTDSGIAVE 121
              +  V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP   D G+AVE
Sbjct: 689  QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPPHTEDVGVAVE 743


>ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
           [Glycine max]
          Length = 594

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 16/181 (8%)
 Frame = -1

Query: 612 DLRDEQIDANESLNEAEDEEDGFTXXXXXXXXXXXXXXXXXXXXXXENQENVDGEESDSA 433
           D+ +E +D +E L++  +++DG                        +   ++ G E++  
Sbjct: 419 DMEEECMDVDEYLDD--EDKDGDADENSSFSGEDDVKSEVLPEREKDRAGSISGAENEGI 476

Query: 432 EEWKL--VDDQPDYSKGWKGLNDQLNDD---------DPQGEKEFSDDVMINAESLGRDV 286
           +E     ++++ DYS GW   +D +++D         D Q E    D+ ++   S+G+  
Sbjct: 477 KEVDCEGMEEKEDYSDGWLYDDDLVDEDEFCSPSTVADQQNESYKKDNSVVKDGSIGQSG 536

Query: 285 QTVETSAVMGVGLQELLSLIDEKLNNQN-----VVERRSSDTFSRKWRPPCKTDSGIAVE 121
             V+TSAV GVGLQELL LID+KL+ QN     VVER     + RKWRP    +SGIAVE
Sbjct: 537 PHVKTSAVTGVGLQELLELIDKKLSVQNKKGARVVER---SIYDRKWRPSHNQESGIAVE 593

Query: 120 Q 118
           Q
Sbjct: 594 Q 594


>emb|CBI18834.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 63/178 (35%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
 Frame = -1

Query: 612 DLRDEQIDANESLNEAEDEEDGFTXXXXXXXXXXXXXXXXXXXXXXENQENVDGEESDSA 433
           DL++E++ A++ L+  ED+                           ++ EN    E  S 
Sbjct: 42  DLQEEEMGADKYLDNGEDD----VVDSLSRAEGGDMPSELSAEPVDDDDENDIVSELSSG 97

Query: 432 EEWKLVDDQP-DYSKGW-KGLNDQLNDD----------DPQGEKEFSDDVMINAESLGRD 289
           +  + +DD+  DYS GW  G  +   DD          D Q  + F D  M   +S  + 
Sbjct: 98  DVQETMDDREGDYSDGWLSGGGEGSEDDQGSPPRWKTMDDQQSESFKDRRMTEKDSCSQP 157

Query: 288 --VQTVETSAVMGVGLQELLSLIDEKLNNQNVVERRSSDTFSRKWRPPCKTDSGIAVE 121
             +  V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP   D G+AVE
Sbjct: 158 QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPPHTEDVGVAVE 212


>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 46/98 (46%), Positives = 57/98 (58%)
 Frame = -1

Query: 414 DDQPDYSKGWKGLNDQLNDDDPQGEKEFSDDVMINAESLGRDVQTVETSAVMGVGLQELL 235
           DD+ D        + Q   DD +G+  +SDD     + +      V+TSAVMGVGLQELL
Sbjct: 492 DDENDIVSELSSGDVQETMDDHEGD--YSDDSCSQPQCIPH----VKTSAVMGVGLQELL 545

Query: 234 SLIDEKLNNQNVVERRSSDTFSRKWRPPCKTDSGIAVE 121
           +LIDEKL  Q V ER   + F RKWRPP   D G+AVE
Sbjct: 546 ALIDEKLETQKVPER---NYFDRKWRPPHTEDVGVAVE 580


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