BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019019
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61823.1| hypothetical protein VITISV_008493 [Vitis vinifera]    86   4e-15
emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]    86   4e-15
emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]    84   9e-15
emb|CCH50966.1| T4.5 [Malus x robusta]                                 82   4e-14
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    82   4e-14

>emb|CAN61823.1| hypothetical protein VITISV_008493 [Vitis vinifera]
          Length = 414

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = +2

Query: 17  ALMDSLLQMGFVLSHADNSLFIQKLQTTLTYVLIYVDDILITSNSNSHCFTIIEHLSDSF 196
           AL D+LL+ GF+ S  DNSLFI K    L Y L+YVDDI++TSN+ S    II  L  +F
Sbjct: 45  ALRDALLRFGFIHSATDNSLFIYKSHDILCYCLVYVDDIIVTSNTLSFVNNIINKLGSTF 104

Query: 197 AMKDLGLLHYFLGLEV 244
           ++KD+G LHYFLG+EV
Sbjct: 105 SVKDMGSLHYFLGIEV 120


>emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]
          Length = 1352

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = +2

Query: 17  ALMDSLLQMGFVLSHADNSLFIQKLQTTLTYVLIYVDDILITSNSNSHCFTIIEHLSDSF 196
           AL D+LL+ GF+ S  DNSLFI K    L Y L+YVDDI++TSN+ S    II  L  +F
Sbjct: 61  ALRDALLRFGFIHSATDNSLFIYKSHDILCYCLVYVDDIIVTSNTLSFVNNIINKLGSTF 120

Query: 197 AMKDLGLLHYFLGLEV 244
           ++KD+G LHYFLG+EV
Sbjct: 121 SVKDMGSLHYFLGIEV 136


>emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]
          Length = 1429

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = +2

Query: 17   ALMDSLLQMGFVLSHADNSLFIQKLQTTLTYVLIYVDDILITSNSNSHCFTIIEHLSDSF 196
            AL D+LL  GF+ S  DNSLFI K    L Y L+YVDDI++TSN+ S    II  L  +F
Sbjct: 785  ALRDALLSFGFIHSATDNSLFIYKSHDILCYCLVYVDDIIVTSNTLSFVNNIINKLGSTF 844

Query: 197  AMKDLGLLHYFLGLEV 244
             +KD+G LHYFLG+EV
Sbjct: 845  LVKDMGSLHYFLGIEV 860


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/82 (48%), Positives = 59/82 (71%)
 Frame = +2

Query: 2    RAVDAALMDSLLQMGFVLSHADNSLFIQKLQTTLTYVLIYVDDILITSNSNSHCFTIIEH 181
            RA   A   ++L +GF  SH+D SLFI++  T++T++L+YVDDI+IT +S + C +II  
Sbjct: 1303 RAWYEAFYTAILSLGFSSSHSDTSLFIKR-DTSITFILVYVDDIIITGSSVTECQSIISQ 1361

Query: 182  LSDSFAMKDLGLLHYFLGLEVH 247
            L   F +KDLG ++YFLG+EVH
Sbjct: 1362 LQTMFPVKDLGDINYFLGIEVH 1383


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 42/82 (51%), Positives = 54/82 (65%)
 Frame = +2

Query: 2    RAVDAALMDSLLQMGFVLSHADNSLFIQKLQTTLTYVLIYVDDILITSNSNSHCFTIIEH 181
            RA  + L + L  +GFV S AD SLFI    +T  Y+L+YVDDI+IT +S      ++  
Sbjct: 1079 RAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAK 1138

Query: 182  LSDSFAMKDLGLLHYFLGLEVH 247
            L D FA+KDLG LHYFLG+EVH
Sbjct: 1139 LKDDFAIKDLGDLHYFLGIEVH 1160