BLASTX nr result

ID: Cimicifuga21_contig00019009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019009
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO53698.1| fruit ripening and abscission polygalacturonase [...   169   3e-40
ref|XP_003556683.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur...   162   2e-38
gb|AAC70951.1| polygalacturonase 7 [Solanum lycopersicum]             162   3e-38
ref|XP_002309718.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003528555.1| PREDICTED: polygalacturonase-like [Glycine max]   162   3e-38

>gb|AFO53698.1| fruit ripening and abscission polygalacturonase [Elaeis guineensis]
           gi|448872674|gb|AGE46022.1| polygalacturonase [Elaeis
           guineensis]
          Length = 391

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/120 (65%), Positives = 89/120 (74%)
 Frame = +2

Query: 2   TAPGNSPNTDGIHVQRSSDVTIMSSGIKTGDDCISIGPGTRNLWVEHISCGPGHGISIGS 181
           TAPGNSPNTDGIHVQ S+DVTI  +GIKTGDDCISIGPGT NLW+E ++CGPGHGISIGS
Sbjct: 188 TAPGNSPNTDGIHVQSSTDVTITGAGIKTGDDCISIGPGTTNLWIEKVTCGPGHGISIGS 247

Query: 182 LGKELVEXXXXXXXXXXXXXXXXXXXMRIKAWGRPSNGFVKGVLFQHAIMNNVENPLVID 361
           LG E  E                   +RIK WGRPS GFVKGV+F+HA+M NV NP++ID
Sbjct: 248 LGNEYEEKGVENVTVKTAVFTGTENGLRIKTWGRPSEGFVKGVVFEHAMMQNVRNPIIID 307


>ref|XP_003556683.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
           max]
          Length = 399

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/119 (64%), Positives = 90/119 (75%)
 Frame = +2

Query: 5   APGNSPNTDGIHVQRSSDVTIMSSGIKTGDDCISIGPGTRNLWVEHISCGPGHGISIGSL 184
           A GNSPNTDGIHVQ SS +TI++S I+TGDDCIS+GPGT NLW+E+I+CGPGHGISIGSL
Sbjct: 196 ADGNSPNTDGIHVQMSSHITILNSKIRTGDDCISVGPGTTNLWIENIACGPGHGISIGSL 255

Query: 185 GKELVEXXXXXXXXXXXXXXXXXXXMRIKAWGRPSNGFVKGVLFQHAIMNNVENPLVID 361
           GK+L E                   +RIK WGRPSNGFV+ VLFQ AIM NVENP++ID
Sbjct: 256 GKDLKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDAIMVNVENPVIID 314


>gb|AAC70951.1| polygalacturonase 7 [Solanum lycopersicum]
          Length = 397

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/120 (62%), Positives = 89/120 (74%)
 Frame = +2

Query: 2   TAPGNSPNTDGIHVQRSSDVTIMSSGIKTGDDCISIGPGTRNLWVEHISCGPGHGISIGS 181
           +APGNSPNTDGIH+Q SSDVTI++S I TGDDCISIGPG  NLW E+I+CGPGHGISIGS
Sbjct: 191 SAPGNSPNTDGIHLQSSSDVTILNSQIGTGDDCISIGPGNSNLWFENIACGPGHGISIGS 250

Query: 182 LGKELVEXXXXXXXXXXXXXXXXXXXMRIKAWGRPSNGFVKGVLFQHAIMNNVENPLVID 361
           LG E+ E                   +R+K W RPSNGFV+ VLFQH +MNNV+NP++ID
Sbjct: 251 LGWEMQEAGVQNVTVKTSSFTGTENGVRVKTWARPSNGFVRNVLFQHVVMNNVQNPIIID 310


>ref|XP_002309718.1| predicted protein [Populus trichocarpa] gi|222852621|gb|EEE90168.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/120 (63%), Positives = 89/120 (74%)
 Frame = +2

Query: 2   TAPGNSPNTDGIHVQRSSDVTIMSSGIKTGDDCISIGPGTRNLWVEHISCGPGHGISIGS 181
           TA GNSPNTDGIHVQ SS VTI++S I TGDDC+S+G GT NLW+E++ CGPGHGISIGS
Sbjct: 188 TASGNSPNTDGIHVQLSSGVTILNSKIGTGDDCVSVGAGTTNLWIENVVCGPGHGISIGS 247

Query: 182 LGKELVEXXXXXXXXXXXXXXXXXXXMRIKAWGRPSNGFVKGVLFQHAIMNNVENPLVID 361
           LGK+LVE                   +RIK WGRPSNGFV+ VLFQHA+M  V+NP+VID
Sbjct: 248 LGKDLVEPGVQNVTVKTVTFIGTQNGLRIKTWGRPSNGFVRNVLFQHAVMTKVQNPIVID 307


>ref|XP_003528555.1| PREDICTED: polygalacturonase-like [Glycine max]
          Length = 398

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/119 (64%), Positives = 89/119 (74%)
 Frame = +2

Query: 5   APGNSPNTDGIHVQRSSDVTIMSSGIKTGDDCISIGPGTRNLWVEHISCGPGHGISIGSL 184
           A GNSPNTDGIH+Q SS V I++S I+TGDDCISIGPGT NLW+E+I+CGPGHGISIGSL
Sbjct: 195 ADGNSPNTDGIHIQMSSHVAIINSKIRTGDDCISIGPGTTNLWIENIACGPGHGISIGSL 254

Query: 185 GKELVEXXXXXXXXXXXXXXXXXXXMRIKAWGRPSNGFVKGVLFQHAIMNNVENPLVID 361
           GK+L E                   +RIK WGRPSNGFV+ VLFQ AIM NVENP++ID
Sbjct: 255 GKDLKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDAIMENVENPVIID 313


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