BLASTX nr result

ID: Cimicifuga21_contig00018992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018992
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   607   e-171
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   560   e-157
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   560   e-157
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      560   e-157
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   557   e-156

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
            gi|296089917|emb|CBI39736.3| unnamed protein product
            [Vitis vinifera]
          Length = 522

 Score =  607 bits (1565), Expect = e-171
 Identities = 287/365 (78%), Positives = 325/365 (89%), Gaps = 4/365 (1%)
 Frame = +3

Query: 3    GLKLHVALSFHSSVQSSNG-KGGVSLPLWILEIGRLNSNIYYRDQNGFSNDDYLTLGVDQ 179
            GLKLHVALSFHS++ SS+  KGGVSLPLWI+EIG LN +IYYRDQNGFSNDDYLTLGVD+
Sbjct: 157  GLKLHVALSFHSNMHSSSRVKGGVSLPLWIVEIGDLNKDIYYRDQNGFSNDDYLTLGVDE 216

Query: 180  IPLFYGRTALQCYEDFMFSFMNKFDTLMGNVIEEVSIGLGPSGELRYPAHPSNDGRWKFP 359
            +PLF GRTALQCYEDFMFSF+NKF++ +G+VIEE+S+GLGPSGELRYPAHP  DGRW+FP
Sbjct: 217  LPLFCGRTALQCYEDFMFSFINKFESFIGSVIEEISVGLGPSGELRYPAHPFGDGRWRFP 276

Query: 360  GIGEFQCYDKYMMEDLQRAACQEGQPEWGDKGPQNAGCYNSFPSGIPFFENGGESFLSEY 539
            GIGEFQCYDKYMM DL+ AACQEG+P+WGDKGPQNAG YNS PSG+PFFE G ESFLS+Y
Sbjct: 277  GIGEFQCYDKYMMRDLKIAACQEGKPQWGDKGPQNAGYYNSLPSGVPFFEEGQESFLSDY 336

Query: 540  GQFFLEWYSGRLICHADAILAKAANLFKKYQDNGSDTVLLVAKIGGIYWWYQTDSHPAEL 719
            G+FFLEWYSGRLI HADAIL KAAN+ KKYQ++   +VLLVAKIGGIYWWY T SHPAEL
Sbjct: 337  GRFFLEWYSGRLIRHADAILTKAANMLKKYQESKKSSVLLVAKIGGIYWWYHTLSHPAEL 396

Query: 720  TAGYFNTAMRDGYDPLASVLSRHGAALHISCLEMIDSETPSNYQCSPEGLLQQIRTVTKK 899
            TAGY+NTA+RDGYDP+AS+LSRHGAALHISCLEM+D+ETP  Y CSPE LLQQI TV+KK
Sbjct: 397  TAGYYNTALRDGYDPVASMLSRHGAALHISCLEMMDNETPPTYLCSPERLLQQIWTVSKK 456

Query: 900  RKIHLTGRNAIERFDKAGLWQITTKCY--QAE-TGSFTYFRMNDKIFRVENWSNFVPFVR 1070
            R +HLTGRN  ERFDKAGLWQI   CY  QAE   SFTYFRMN+KIFR ENW+NFVPFVR
Sbjct: 457  RIVHLTGRNTNERFDKAGLWQIHANCYHPQAEAVRSFTYFRMNEKIFRAENWNNFVPFVR 516

Query: 1071 RMNSD 1085
            +M++D
Sbjct: 517  KMSTD 521


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
            gi|25054836|gb|AAN71908.1| putative beta-amylase
            [Arabidopsis thaliana]
          Length = 484

 Score =  560 bits (1443), Expect = e-157
 Identities = 258/364 (70%), Positives = 305/364 (83%), Gaps = 3/364 (0%)
 Frame = +3

Query: 3    GLKLHVALSFHSSVQSSNGKGGVSLPLWILEIGRLNSNIYYRDQNGFSNDDYLTLGVDQI 182
            GLKLHVAL FHS++    GKGG+SLPLWI EIG +N +IYYRD++GFSN+DYLTLGVDQ+
Sbjct: 120  GLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQL 179

Query: 183  PLFYGRTALQCYEDFMFSFMNKFDTLMGNVIEEVSIGLGPSGELRYPAHPSNDGRWKFPG 362
            PLF GRTA+QCYEDFM SF  KF+  +GNVIEE+SIGLGPSGELRYPAHPS DGRWKFPG
Sbjct: 180  PLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPG 239

Query: 363  IGEFQCYDKYMMEDLQRAACQEGQPEWGDKGPQNAGCYNSFPSGIPFFENGGESFLSEYG 542
            IGEFQC+DKYMMEDL   A QEG+P+WG + P N GCYNSFPSG+PFFE G +SFLS+YG
Sbjct: 240  IGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYG 299

Query: 543  QFFLEWYSGRLICHADAILAKAANLFKKYQDNGSDTVLLVAKIGGIYWWYQTDSHPAELT 722
            +FFLEWYSG+LICHADAILAKAA++ ++ Q+    +V+LVAKIGGIYWWY+T SHPAELT
Sbjct: 300  RFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELT 359

Query: 723  AGYFNTAMRDGYDPLASVLSRHGAALHISCLEMIDSETPSNYQCSPEGLLQQIRTVTKKR 902
            AGY+NT++RDGYDP+ASVLSRHGAAL+I CL+M DSE P  Y CSPEGL +QI  V+KK 
Sbjct: 360  AGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKW 419

Query: 903  KIHLTGRNAIERFDKAGLWQITTKCYQAE---TGSFTYFRMNDKIFRVENWSNFVPFVRR 1073
             IH+TGRN  ERFD+ GL QI   C Q       SFT+ RMN+KIFRVENW+NFVPF+R+
Sbjct: 420  TIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQ 479

Query: 1074 MNSD 1085
            M++D
Sbjct: 480  MSAD 483


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
            gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName: Full=Inactive
            beta-amylase 4, chloroplastic; AltName: Full=Inactive
            beta-amylase 6; Flags: Precursor
            gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
            thaliana] gi|332009286|gb|AED96669.1| inactive
            beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  560 bits (1443), Expect = e-157
 Identities = 258/364 (70%), Positives = 305/364 (83%), Gaps = 3/364 (0%)
 Frame = +3

Query: 3    GLKLHVALSFHSSVQSSNGKGGVSLPLWILEIGRLNSNIYYRDQNGFSNDDYLTLGVDQI 182
            GLKLHVAL FHS++    GKGG+SLPLWI EIG +N +IYYRD++GFSN+DYLTLGVDQ+
Sbjct: 167  GLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQL 226

Query: 183  PLFYGRTALQCYEDFMFSFMNKFDTLMGNVIEEVSIGLGPSGELRYPAHPSNDGRWKFPG 362
            PLF GRTA+QCYEDFM SF  KF+  +GNVIEE+SIGLGPSGELRYPAHPS DGRWKFPG
Sbjct: 227  PLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPG 286

Query: 363  IGEFQCYDKYMMEDLQRAACQEGQPEWGDKGPQNAGCYNSFPSGIPFFENGGESFLSEYG 542
            IGEFQC+DKYMMEDL   A QEG+P+WG + P N GCYNSFPSG+PFFE G +SFLS+YG
Sbjct: 287  IGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYG 346

Query: 543  QFFLEWYSGRLICHADAILAKAANLFKKYQDNGSDTVLLVAKIGGIYWWYQTDSHPAELT 722
            +FFLEWYSG+LICHADAILAKAA++ ++ Q+    +V+LVAKIGGIYWWY+T SHPAELT
Sbjct: 347  RFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELT 406

Query: 723  AGYFNTAMRDGYDPLASVLSRHGAALHISCLEMIDSETPSNYQCSPEGLLQQIRTVTKKR 902
            AGY+NT++RDGYDP+ASVLSRHGAAL+I CL+M DSE P  Y CSPEGL +QI  V+KK 
Sbjct: 407  AGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKW 466

Query: 903  KIHLTGRNAIERFDKAGLWQITTKCYQAE---TGSFTYFRMNDKIFRVENWSNFVPFVRR 1073
             IH+TGRN  ERFD+ GL QI   C Q       SFT+ RMN+KIFRVENW+NFVPF+R+
Sbjct: 467  TIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQ 526

Query: 1074 MNSD 1085
            M++D
Sbjct: 527  MSAD 530


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  560 bits (1443), Expect = e-157
 Identities = 258/364 (70%), Positives = 305/364 (83%), Gaps = 3/364 (0%)
 Frame = +3

Query: 3    GLKLHVALSFHSSVQSSNGKGGVSLPLWILEIGRLNSNIYYRDQNGFSNDDYLTLGVDQI 182
            GLKLHVAL FHS++    GKGG+SLPLWI EIG +N +IYYRD++GFSN+DYLTLGVDQ+
Sbjct: 134  GLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQL 193

Query: 183  PLFYGRTALQCYEDFMFSFMNKFDTLMGNVIEEVSIGLGPSGELRYPAHPSNDGRWKFPG 362
            PLF GRTA+QCYEDFM SF  KF+  +GNVIEE+SIGLGPSGELRYPAHPS DGRWKFPG
Sbjct: 194  PLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPG 253

Query: 363  IGEFQCYDKYMMEDLQRAACQEGQPEWGDKGPQNAGCYNSFPSGIPFFENGGESFLSEYG 542
            IGEFQC+DKYMMEDL   A QEG+P+WG + P N GCYNSFPSG+PFFE G +SFLS+YG
Sbjct: 254  IGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYG 313

Query: 543  QFFLEWYSGRLICHADAILAKAANLFKKYQDNGSDTVLLVAKIGGIYWWYQTDSHPAELT 722
            +FFLEWYSG+LICHADAILAKAA++ ++ Q+    +V+LVAKIGGIYWWY+T SHPAELT
Sbjct: 314  RFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELT 373

Query: 723  AGYFNTAMRDGYDPLASVLSRHGAALHISCLEMIDSETPSNYQCSPEGLLQQIRTVTKKR 902
            AGY+NT++RDGYDP+ASVLSRHGAAL+I CL+M DSE P  Y CSPEGL +QI  V+KK 
Sbjct: 374  AGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKW 433

Query: 903  KIHLTGRNAIERFDKAGLWQITTKCYQAE---TGSFTYFRMNDKIFRVENWSNFVPFVRR 1073
             IH+TGRN  ERFD+ GL QI   C Q       SFT+ RMN+KIFRVENW+NFVPF+R+
Sbjct: 434  TIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQ 493

Query: 1074 MNSD 1085
            M++D
Sbjct: 494  MSAD 497


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
            gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 531

 Score =  557 bits (1436), Expect = e-156
 Identities = 258/364 (70%), Positives = 302/364 (82%), Gaps = 3/364 (0%)
 Frame = +3

Query: 3    GLKLHVALSFHSSVQSSNGKGGVSLPLWILEIGRLNSNIYYRDQNGFSNDDYLTLGVDQI 182
            GLKLHVAL FHS++    GKGG+SLPLWI EIG +N +IYYRD+ G SN+DYLTLGVDQ+
Sbjct: 167  GLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKRGLSNNDYLTLGVDQL 226

Query: 183  PLFYGRTALQCYEDFMFSFMNKFDTLMGNVIEEVSIGLGPSGELRYPAHPSNDGRWKFPG 362
            PLF GRTA+QCYEDFM SF  KF+   GNVIEE+SIGLGPSGELRYPAHPS DGRWKFPG
Sbjct: 227  PLFGGRTAVQCYEDFMLSFSTKFEPYFGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPG 286

Query: 363  IGEFQCYDKYMMEDLQRAACQEGQPEWGDKGPQNAGCYNSFPSGIPFFENGGESFLSEYG 542
            IGEFQC+DKYMMEDL   A QEG+P+WG + P N GCYNSFPSG+PFFE G +SFLS+YG
Sbjct: 287  IGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYG 346

Query: 543  QFFLEWYSGRLICHADAILAKAANLFKKYQDNGSDTVLLVAKIGGIYWWYQTDSHPAELT 722
            +FFLEWYSG+LICHADAILAKAA++ ++ Q++   +V+LVAKIGGIYWWY+T SHPAELT
Sbjct: 347  RFFLEWYSGKLICHADAILAKAADVLRRRQEDEKSSVMLVAKIGGIYWWYKTSSHPAELT 406

Query: 723  AGYFNTAMRDGYDPLASVLSRHGAALHISCLEMIDSETPSNYQCSPEGLLQQIRTVTKKR 902
            AGY+NTA+RDGYDP+ASVLSRHGAALHI CL+M DSETP  Y CSPEGL +QI  V+KK 
Sbjct: 407  AGYYNTALRDGYDPVASVLSRHGAALHIPCLDMADSETPEKYLCSPEGLRKQIHDVSKKW 466

Query: 903  KIHLTGRNAIERFDKAGLWQITTKCYQAE---TGSFTYFRMNDKIFRVENWSNFVPFVRR 1073
             I +TGRN  ERFD+ GL QI   C Q       SFT+ RMN+KIFR ENW+NFVPF+R+
Sbjct: 467  TIQVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMNEKIFRGENWNNFVPFIRQ 526

Query: 1074 MNSD 1085
            M++D
Sbjct: 527  MSAD 530