BLASTX nr result

ID: Cimicifuga21_contig00018990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018990
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-...   541   e-151
emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]   533   e-149
ref|XP_004159556.1| PREDICTED: trihelix transcription factor GT-...   524   e-146
ref|XP_004142945.1| PREDICTED: LOW QUALITY PROTEIN: trihelix tra...   520   e-145
ref|XP_002270945.2| PREDICTED: trihelix transcription factor GT-...   519   e-144

>ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-1 isoform 1 [Vitis
            vinifera]
          Length = 378

 Score =  541 bits (1395), Expect = e-151
 Identities = 273/385 (70%), Positives = 311/385 (80%), Gaps = 4/385 (1%)
 Frame = -1

Query: 1348 MYLSDKPTPIDFYKEEG-RDMMIEVXXXXXXXXXXXXXXXXXXXXXXXADSSGEDHEMKA 1172
            MYLS+K  PIDFYKE G R+MM+EV                        +SSGEDHEMKA
Sbjct: 1    MYLSEKARPIDFYKEGGGREMMLEVVANNGLSPQQQQQQMILA------ESSGEDHEMKA 54

Query: 1171 PKKRAETWIQDETRCLISLRREMDCLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKW 992
            PKKRAETW+Q+ETR LIS RRE+D LFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKW
Sbjct: 55   PKKRAETWVQEETRNLISFRREVDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKW 114

Query: 991  RNLLKEFKKAKYQERGSGSG--KIAYYKXXXXXXXXRIKHGSCKSPTTSKVDSYVQFSDR 818
            RNLLKEFKKAK+Q+R S SG  K+AYYK        R K+GS KSPT SKVDSY+QFSD+
Sbjct: 115  RNLLKEFKKAKHQDRSSSSGSAKMAYYKELEELLRDRSKNGSYKSPTPSKVDSYIQFSDK 174

Query: 817  GPDDANMPFGPVEASGRSTLNLERTLDHEGHPLAIAATDGVTTSGVPPWNWRETSGNGGD 638
            G +DA +PFG VEASGRST+NLER LDH+G PLAI A D V  SGVPPWNWRET GNGG+
Sbjct: 175  GLEDAGIPFGSVEASGRSTVNLERPLDHDGDPLAITAADAVAASGVPPWNWRETPGNGGE 234

Query: 637  GNS-FCGRVITIKWGDFTRRIGIDGTAEAIKEAIKSAFGLRTRRAFWLEDEDGIVRCLDR 461
            G+S + GRVI++KWG++TRRIGIDG   AIK+AIKSAF LRT+RAFWLEDEDG+VRCLDR
Sbjct: 235  GHSSYGGRVISVKWGEYTRRIGIDGNLGAIKDAIKSAFNLRTKRAFWLEDEDGVVRCLDR 294

Query: 460  DMPLGAYTLHLDEGITIKICVYDEADRIPVRTEENTLYTEDDFRDFLGRRGWSGLRELSG 281
            DMPLG YTLHLDEG+TIK+C+YD+ DRI VRTEE TLYTE+DFRDFL RRG  GLREL+G
Sbjct: 295  DMPLGNYTLHLDEGVTIKVCLYDDPDRITVRTEEKTLYTEEDFRDFLARRGLIGLRELTG 354

Query: 280  FRSVDTLDELRTGAMYQGVVRMMGD 206
            +RS  TLD+L +GAMYQG VR++GD
Sbjct: 355  YRSFHTLDDLHSGAMYQG-VRLLGD 378


>emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]
          Length = 384

 Score =  533 bits (1374), Expect = e-149
 Identities = 261/391 (66%), Positives = 304/391 (77%), Gaps = 16/391 (4%)
 Frame = -1

Query: 1348 MYLSDKPTPIDFYKEE--GRDMMIEVXXXXXXXXXXXXXXXXXXXXXXXADSSGEDHEMK 1175
            MYL +KP P+DFYKEE  GRDMMIEV                        DSSGEDHE K
Sbjct: 1    MYLPEKPRPLDFYKEEEEGRDMMIEVVSNGGLPHQQQQMILG--------DSSGEDHEPK 52

Query: 1174 APKKRAETWIQDETRCLISLRREMDCLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDK 995
            APKKRAETW+QDETR LI+ RR+MDCLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDK
Sbjct: 53   APKKRAETWVQDETRSLIAFRRDMDCLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDK 112

Query: 994  WRNLLKEFKKAKYQERGSGSGKIAYYKXXXXXXXXRIKHGSCKSPTTSKVDSYVQFSDRG 815
            WRNLLKEFKKAK+Q+RGSGS K++YYK        R K+   KSPT SKVD ++QFSD+G
Sbjct: 113  WRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILKERSKNAHYKSPTMSKVDPFIQFSDKG 172

Query: 814  PDDANMPFGPVEASGRSTLNLERTLDHEGHPLAIAATDGVTTSGVPPWNWRETSGNGGDG 635
             DD ++PFGPVEASGR TLNLER LDH+GHPLAI + D VT +GVPPWNWRET G+GG+ 
Sbjct: 173  IDDTSIPFGPVEASGRPTLNLERQLDHDGHPLAITSADAVTANGVPPWNWRETPGSGGES 232

Query: 634  NSFCGRVITIKWGDFTRRIGIDGTAEAIKEAIKSAFGLRTRRAFWLEDEDGIVRCLDRDM 455
             S+ GRVI++KWGD+TRRIGIDGTA+AIKEAIKSAF LRT+R FWLEDED I+R LDRDM
Sbjct: 233  QSYGGRVISVKWGDYTRRIGIDGTADAIKEAIKSAFRLRTKRGFWLEDEDQIIRTLDRDM 292

Query: 454  PLGAYTLHLDE--------------GITIKICVYDEADRIPVRTEENTLYTEDDFRDFLG 317
            PLG+Y+LHLDE              GI IK+C YDE++ IPV TEE T YTE+DFRDFL 
Sbjct: 293  PLGSYSLHLDEVMSEVLNVRALLFSGIGIKVCHYDESEHIPVHTEEKTFYTEEDFRDFLT 352

Query: 316  RRGWSGLRELSGFRSVDTLDELRTGAMYQGV 224
            RRGWS LREL+G+R++D +D+LR  ++Y+G+
Sbjct: 353  RRGWSSLRELNGYRNIDNMDDLRPDSLYRGM 383


>ref|XP_004159556.1| PREDICTED: trihelix transcription factor GT-1-like [Cucumis sativus]
          Length = 382

 Score =  524 bits (1349), Expect = e-146
 Identities = 251/381 (65%), Positives = 295/381 (77%), Gaps = 6/381 (1%)
 Frame = -1

Query: 1348 MYLSDKPTPIDFYKEEG-RDMMIEVXXXXXXXXXXXXXXXXXXXXXXXA-----DSSGED 1187
            MYLSDKP PID YKEEG RDM+IEV                             DSSGED
Sbjct: 1    MYLSDKPRPIDIYKEEGSRDMLIEVASNGDHHIQPHQPQPQPQQTHQQHQMMLGDSSGED 60

Query: 1186 HEMKAPKKRAETWIQDETRCLISLRREMDCLFNTSKSNKHLWEQISAKMREKGFDRSPTM 1007
            HE+KAPKKRAETW+QDETR LI+LRREMD LFNTSKSNKHLWEQIS KMRE+GFDRSPTM
Sbjct: 61   HEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISTKMRERGFDRSPTM 120

Query: 1006 CTDKWRNLLKEFKKAKYQERGSGSGKIAYYKXXXXXXXXRIKHGSCKSPTTSKVDSYVQF 827
            CTDKWRNLLKEFKKAK+ +RGSGS K++ YK        R K    KSPT  K+DSY+QF
Sbjct: 121  CTDKWRNLLKEFKKAKHHDRGSGSAKMSCYKEIEEILKERSKSTQYKSPTPPKIDSYMQF 180

Query: 826  SDRGPDDANMPFGPVEASGRSTLNLERTLDHEGHPLAIAATDGVTTSGVPPWNWRETSGN 647
            SD+G +D  + FGPVEA GR +LNLER LDH+GHPLAI A D V  +G+PPWNWRE  GN
Sbjct: 181  SDKGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGN 240

Query: 646  GGDGNSFCGRVITIKWGDFTRRIGIDGTAEAIKEAIKSAFGLRTRRAFWLEDEDGIVRCL 467
            GG+  +F GRVI++KWGD+TRRIG+DGTAEAIKEAIKSAFGLRT+RAFWLEDED +VR L
Sbjct: 241  GGESQAFGGRVISVKWGDYTRRIGVDGTAEAIKEAIKSAFGLRTKRAFWLEDEDQVVRSL 300

Query: 466  DRDMPLGAYTLHLDEGITIKICVYDEADRIPVRTEENTLYTEDDFRDFLGRRGWSGLREL 287
            DRDMPLG YTLHLDEG+ +KIC+YDE++ +PV +E+   Y E+D+RDFL RRGW+ LRE 
Sbjct: 301  DRDMPLGNYTLHLDEGVAVKICLYDESNHLPVHSEDKVFYIEEDYRDFLARRGWTSLREF 360

Query: 286  SGFRSVDTLDELRTGAMYQGV 224
             G+R++D +D+LR GA+Y+GV
Sbjct: 361  DGYRNIDNMDDLRPGAIYRGV 381


>ref|XP_004142945.1| PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor
            GT-1-like [Cucumis sativus]
          Length = 387

 Score =  520 bits (1339), Expect = e-145
 Identities = 251/386 (65%), Positives = 295/386 (76%), Gaps = 11/386 (2%)
 Frame = -1

Query: 1348 MYLSDKPTPIDFYKEEG-RDMMIEVXXXXXXXXXXXXXXXXXXXXXXXA-----DSSGED 1187
            MYLSDKP PID YKEEG RDM+IEV                             DSSGED
Sbjct: 1    MYLSDKPRPIDIYKEEGSRDMLIEVASNGDHHIQPHQPQPQPQQTHQQHQMMLGDSSGED 60

Query: 1186 HEMKAPKKRAETWIQDETRCLISLRREMDCLFNTSKSNKHLWEQISAKMREKGFDRSPTM 1007
            HE+KAPKKRAETW+QDETR LI+LRREMD LFNTSKSNKHLWEQIS KMRE+GFDRSPTM
Sbjct: 61   HEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISTKMRERGFDRSPTM 120

Query: 1006 CTDKWRNLLKEFKKAKYQERGSGSGKIAYYKXXXXXXXXRI-----KHGSCKSPTTSKVD 842
            CTDKWRNLLKEFKKAK+ +RGSGS K++ YK         I     K    KSPT  K+D
Sbjct: 121  CTDKWRNLLKEFKKAKHHDRGSGSAKMSCYKEIEEIEIEEILKERSKSTQYKSPTPPKID 180

Query: 841  SYVQFSDRGPDDANMPFGPVEASGRSTLNLERTLDHEGHPLAIAATDGVTTSGVPPWNWR 662
            SY+QFSD+G +D  + FGPVEA GR +LNLER LDH+GHPLAI A D V  +G+PPWNWR
Sbjct: 181  SYMQFSDKGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWR 240

Query: 661  ETSGNGGDGNSFCGRVITIKWGDFTRRIGIDGTAEAIKEAIKSAFGLRTRRAFWLEDEDG 482
            E  GNGG+  +F GRVI++KWGD+TRRIG+DGTAEAIKEAIKSAFGLRT+RAFWLEDED 
Sbjct: 241  EAPGNGGESQAFGGRVISVKWGDYTRRIGVDGTAEAIKEAIKSAFGLRTKRAFWLEDEDQ 300

Query: 481  IVRCLDRDMPLGAYTLHLDEGITIKICVYDEADRIPVRTEENTLYTEDDFRDFLGRRGWS 302
            +VR LDRDMPLG YTLHLDEG+ +KIC+YDE++ +PV +E+   Y E+D+RDFL RRGW+
Sbjct: 301  VVRSLDRDMPLGNYTLHLDEGVAVKICLYDESNHLPVHSEDKVFYIEEDYRDFLARRGWT 360

Query: 301  GLRELSGFRSVDTLDELRTGAMYQGV 224
             LRE  G+R++D +D+LR GA+Y+GV
Sbjct: 361  SLREFDGYRNIDNMDDLRPGAIYRGV 386


>ref|XP_002270945.2| PREDICTED: trihelix transcription factor GT-1 [Vitis vinifera]
          Length = 348

 Score =  519 bits (1336), Expect = e-144
 Identities = 241/327 (73%), Positives = 282/327 (86%)
 Frame = -1

Query: 1204 DSSGEDHEMKAPKKRAETWIQDETRCLISLRREMDCLFNTSKSNKHLWEQISAKMREKGF 1025
            DSSGEDHE KAPKKRAETW+QDETR LI+ RR+MDCLFNTSKSNKHLWEQISAKMREKGF
Sbjct: 21   DSSGEDHEPKAPKKRAETWVQDETRSLIAFRRDMDCLFNTSKSNKHLWEQISAKMREKGF 80

Query: 1024 DRSPTMCTDKWRNLLKEFKKAKYQERGSGSGKIAYYKXXXXXXXXRIKHGSCKSPTTSKV 845
            DRSPTMCTDKWRNLLKEFKKAK+Q+RGSGS K++YYK        R K+   KSPT SKV
Sbjct: 81   DRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILKERSKNAHYKSPTMSKV 140

Query: 844  DSYVQFSDRGPDDANMPFGPVEASGRSTLNLERTLDHEGHPLAIAATDGVTTSGVPPWNW 665
            D ++QFSD+G DD ++PFGPVEASGR TLNLER LDH+GHPLAI + D VT +GVPPWNW
Sbjct: 141  DPFIQFSDKGIDDTSIPFGPVEASGRPTLNLERQLDHDGHPLAITSADAVTANGVPPWNW 200

Query: 664  RETSGNGGDGNSFCGRVITIKWGDFTRRIGIDGTAEAIKEAIKSAFGLRTRRAFWLEDED 485
            RET G+GG+  S+ GRVI++KWGD+TRRIGIDGTA+AIKEAIKSAF LRT+R FWLEDED
Sbjct: 201  RETPGSGGESQSYGGRVISVKWGDYTRRIGIDGTADAIKEAIKSAFRLRTKRGFWLEDED 260

Query: 484  GIVRCLDRDMPLGAYTLHLDEGITIKICVYDEADRIPVRTEENTLYTEDDFRDFLGRRGW 305
             I+R LDRDMPLG+Y+LHLDEGI IK+C YDE++ IPV TEE T YTE+DFRDFL RRGW
Sbjct: 261  QIIRTLDRDMPLGSYSLHLDEGIGIKVCHYDESEHIPVHTEEKTFYTEEDFRDFLTRRGW 320

Query: 304  SGLRELSGFRSVDTLDELRTGAMYQGV 224
            S LREL+G+R++D +D+LR  ++Y+G+
Sbjct: 321  SSLRELNGYRNIDNMDDLRPDSLYRGM 347


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