BLASTX nr result

ID: Cimicifuga21_contig00018973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018973
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-...   174   5e-42
emb|CBI31031.3| unnamed protein product [Vitis vinifera]              174   5e-42
ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Popu...   172   3e-41
ref|XP_004171716.1| PREDICTED: LOW QUALITY PROTEIN: small RNA 2'...   169   3e-40
ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Popu...   167   8e-40

>ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera]
          Length = 948

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/108 (75%), Positives = 94/108 (87%)
 Frame = -2

Query: 326  FDIGTCLEVIEHMEEDQARLFGDVVLGSFCPKILIVSTPNYEYNPILQNSSPSTRQGEKE 147
            FDIGTCLEVIEHMEEDQA LFGDVVL  FCPK+LIVSTPNYEYN ILQ S+PS +  E++
Sbjct: 796  FDIGTCLEVIEHMEEDQACLFGDVVLSYFCPKVLIVSTPNYEYNAILQRSNPSNQ--EED 853

Query: 146  VDKNSESLSCKFRNHDHKFEWTRNQFNCWASDLASRYNYSVEFSGVGG 3
             D+ S+S +C+FRNHDHKFEWTR QFN WAS+LA ++NYSVEFSGVGG
Sbjct: 854  PDETSQSQACRFRNHDHKFEWTRKQFNHWASNLARKHNYSVEFSGVGG 901


>emb|CBI31031.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/108 (75%), Positives = 94/108 (87%)
 Frame = -2

Query: 326  FDIGTCLEVIEHMEEDQARLFGDVVLGSFCPKILIVSTPNYEYNPILQNSSPSTRQGEKE 147
            FDIGTCLEVIEHMEEDQA LFGDVVL  FCPK+LIVSTPNYEYN ILQ S+PS +  E++
Sbjct: 764  FDIGTCLEVIEHMEEDQACLFGDVVLSYFCPKVLIVSTPNYEYNAILQRSNPSNQ--EED 821

Query: 146  VDKNSESLSCKFRNHDHKFEWTRNQFNCWASDLASRYNYSVEFSGVGG 3
             D+ S+S +C+FRNHDHKFEWTR QFN WAS+LA ++NYSVEFSGVGG
Sbjct: 822  PDETSQSQACRFRNHDHKFEWTRKQFNHWASNLARKHNYSVEFSGVGG 869


>ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Populus trichocarpa]
            gi|222847823|gb|EEE85370.1| hypothetical protein
            POPTRDRAFT_177484 [Populus trichocarpa]
          Length = 926

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/108 (75%), Positives = 93/108 (86%)
 Frame = -2

Query: 326  FDIGTCLEVIEHMEEDQARLFGDVVLGSFCPKILIVSTPNYEYNPILQNSSPSTRQGEKE 147
            FDIGTCLEVIEHMEE+QA LFGD+ L  F PK+LIVSTPNYEYN ILQ SSP+T+  E++
Sbjct: 779  FDIGTCLEVIEHMEEEQACLFGDIALSYFRPKVLIVSTPNYEYNVILQGSSPTTQ--EED 836

Query: 146  VDKNSESLSCKFRNHDHKFEWTRNQFNCWASDLASRYNYSVEFSGVGG 3
             D+ S+S SCKFRNHDHKFEWTR QFN WASDLA R++YSVEFSGVGG
Sbjct: 837  PDEKSQSQSCKFRNHDHKFEWTREQFNHWASDLAKRHHYSVEFSGVGG 884


>ref|XP_004171716.1| PREDICTED: LOW QUALITY PROTEIN: small RNA
           2'-O-methyltransferase-like [Cucumis sativus]
          Length = 816

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/108 (73%), Positives = 92/108 (85%)
 Frame = -2

Query: 326 FDIGTCLEVIEHMEEDQARLFGDVVLGSFCPKILIVSTPNYEYNPILQNSSPSTRQGEKE 147
           FDI TCLEVIEHMEEDQA LFG++VL SFCPK+L+VSTPNYEYN ILQ S+ S+++G+  
Sbjct: 664 FDIATCLEVIEHMEEDQAYLFGNLVLSSFCPKLLVVSTPNYEYNVILQGSNLSSQEGDS- 722

Query: 146 VDKNSESLSCKFRNHDHKFEWTRNQFNCWASDLASRYNYSVEFSGVGG 3
            D  ++  SCKFRNHDHKFEWTR QFN WA DLA+R+NYSVEFSGVGG
Sbjct: 723 -DDKTQLQSCKFRNHDHKFEWTREQFNHWARDLATRHNYSVEFSGVGG 769


>ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Populus trichocarpa]
            gi|222872110|gb|EEF09241.1| hypothetical protein
            POPTRDRAFT_270173 [Populus trichocarpa]
          Length = 916

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/108 (75%), Positives = 90/108 (83%)
 Frame = -2

Query: 326  FDIGTCLEVIEHMEEDQARLFGDVVLGSFCPKILIVSTPNYEYNPILQNSSPSTRQGEKE 147
            FDIGTCLEVIEHMEEDQA  FGD+ L  F PK+LIVSTPNYEYN ILQ SSP T+  E+ 
Sbjct: 769  FDIGTCLEVIEHMEEDQACRFGDIALSYFRPKVLIVSTPNYEYNVILQRSSPVTQ--EEY 826

Query: 146  VDKNSESLSCKFRNHDHKFEWTRNQFNCWASDLASRYNYSVEFSGVGG 3
             D+ S+S SCKFRNHDHKFEWTR QFN WAS+LA ++NYSVEFSGVGG
Sbjct: 827  PDEKSQSESCKFRNHDHKFEWTREQFNHWASELAKKHNYSVEFSGVGG 874


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