BLASTX nr result

ID: Cimicifuga21_contig00018962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018962
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76779.1| hypothetical protein VITISV_032081 [Vitis vinifera]   159   9e-37
emb|CBI33727.3| unnamed protein product [Vitis vinifera]              155   1e-35
ref|XP_002865009.1| hypothetical protein ARALYDRAFT_919973 [Arab...   100   4e-19
ref|NP_201536.1| uncharacterized protein [Arabidopsis thaliana] ...    97   7e-18
ref|XP_004170929.1| PREDICTED: uncharacterized LOC101214997, par...    96   1e-17

>emb|CAN76779.1| hypothetical protein VITISV_032081 [Vitis vinifera]
          Length = 323

 Score =  159 bits (402), Expect = 9e-37
 Identities = 117/320 (36%), Positives = 153/320 (47%), Gaps = 21/320 (6%)
 Frame = -3

Query: 897 EKWGDPNFDGDENEEEETLSLCDLP---MCAANNGEKQEIIESKSLEAEDFDFGSCGGSL 727
           EKW +  FD DE EE+E LS CDLP   +C  +N  K+E  +      EDFDFGS   SL
Sbjct: 8   EKWEE--FDSDE-EEDEALSFCDLPNDLICKEDNSGKEENPQVVGT-GEDFDFGSWNRSL 63

Query: 726 LIESEMCAADELFFQGQILPLRLSVSSEPGI----QQGGKVXXXXXXXXXXXXXXXXXXX 559
           L ES+MCAADE+FFQGQILPLRLSVSS+ G+        K                    
Sbjct: 64  LAESDMCAADEVFFQGQILPLRLSVSSDSGLAGYRNDSRKSSRCVSRSESMDRGSWGGFT 123

Query: 558 XXXXXXXXXXXXXXXXXXXXXXXTYKPKFRNQFHSHPSPNPQI-FSTSRLGNASYPSRKS 382
                                  T++ + RN FH+HPSP PQI    +R GN     RKS
Sbjct: 124 SVSSRSSSSRSHNSSISSTSTATTHRSRVRNHFHAHPSPKPQIKIFNTRQGNIGSRGRKS 183

Query: 381 TIWGMFKVGLVRTPEIELQELKLRNTNNAKRVNXXXXXXXXXXXSDIELKT-----GEKK 217
           T+W +F+ GLVRTPEIELQ+LK+R+TN                 ++   K+      EK+
Sbjct: 184 TMWDLFRPGLVRTPEIELQDLKVRSTNKGFDSRNSSRSSSFNSTANNTAKSNHGFNAEKR 243

Query: 216 KT------ERHLFESCRCSVDSVETV--FIIKKKKVVNXXXXXXXXXXXXXXXXXXXXQA 61
           ++      +R     C+CS+ +V+ V   I+  K   N                    + 
Sbjct: 244 RSHRFSIKKREFLSGCKCSISAVDPVPSRIVVIKTSSNGGDSNPNERPSQKQRQHVKKKN 303

Query: 60  LHHKRTFEWLKELSMADVPE 1
           +H  RTFEWLKELS A  P+
Sbjct: 304 MH--RTFEWLKELSHAAAPD 321


>emb|CBI33727.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  155 bits (392), Expect = 1e-35
 Identities = 115/316 (36%), Positives = 149/316 (47%), Gaps = 17/316 (5%)
 Frame = -3

Query: 897 EKWGDPNFDGDENEEEETLSLCDLP---MCAANNGEKQEIIESKSLEAEDFDFGSCGGSL 727
           EKW +  FD DE EE+E LS CDLP   +C  +N  K+E  +      EDFDFGS   SL
Sbjct: 35  EKWEE--FDSDE-EEDEALSFCDLPNDLICKEDNSGKEENPQVVGT-GEDFDFGSWNRSL 90

Query: 726 LIESEMCAADELFFQGQILPLRLSVSSEPGIQQGGKVXXXXXXXXXXXXXXXXXXXXXXX 547
           L ES+MCAADE+FFQGQILPLRLSVSS+ G+                             
Sbjct: 91  LAESDMCAADEVFFQGQILPLRLSVSSDSGL----------------AGYRNDSRKSSRC 134

Query: 546 XXXXXXXXXXXXXXXXXXXTYKPKFRNQFHSHPSPNPQI-FSTSRLGNASYPSRKSTIWG 370
                              +     RN FH+HPSP PQI    +R GN     RKST+W 
Sbjct: 135 VSRSESMDRGSWGGFTSVSSRSSSMRNHFHAHPSPKPQIKIFNTRQGNIGSRGRKSTMWD 194

Query: 369 MFKVGLVRTPEIELQELKLRNTNNAKRVNXXXXXXXXXXXSDIELKT-----GEKKKT-- 211
           +F+ GLVRTPEIELQ+LK+R+TN                 ++   K+      EK+++  
Sbjct: 195 LFRPGLVRTPEIELQDLKVRSTNKGFDSRNSSRSSSFNSTANNTAKSNHGFNAEKRRSHR 254

Query: 210 ----ERHLFESCRCSVDSVETV--FIIKKKKVVNXXXXXXXXXXXXXXXXXXXXQALHHK 49
               +R     C+CS+ +V+ V   I+  K   N                    + +H  
Sbjct: 255 FSIKKREFLSGCKCSISAVDPVPSRIVVIKTSSNGGDSNPNERPSQKQRQHVKKKNMH-- 312

Query: 48  RTFEWLKELSMADVPE 1
           RTFEWLKELS A  P+
Sbjct: 313 RTFEWLKELSHAAAPD 328


>ref|XP_002865009.1| hypothetical protein ARALYDRAFT_919973 [Arabidopsis lyrata subsp.
           lyrata] gi|297310844|gb|EFH41268.1| hypothetical protein
           ARALYDRAFT_919973 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score =  100 bits (250), Expect = 4e-19
 Identities = 95/301 (31%), Positives = 128/301 (42%), Gaps = 18/301 (5%)
 Frame = -3

Query: 867 DENEEEETLSLCDLPMCAANNGEKQEIIESKSLEAED-FDFGSCGGSLLIESEMC----- 706
           D++ EEE LSLCDLP     NGE + I++ +  E +  F+FG  G S    S+ C     
Sbjct: 25  DDDIEEEALSLCDLPN---ENGELRSIVKEEDEEFDSGFEFG-IGSSFRAGSDSCEPAPE 80

Query: 705 --AADELFFQGQILPLRLSVSSEPGIQQGGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 532
              ADELFF+G+ILPLR SVS + G+ +  ++                            
Sbjct: 81  MSTADELFFKGRILPLRHSVSLDAGLNEPTRLITRSESVEYRRTGVRSDR---------- 130

Query: 531 XXXXXXXXXXXXXXTYKPKFRNQF--HSHPSPNPQIFSTSRLG---NASYPSRKSTIWGM 367
                             K +N F  +S PSP PQI  +S +    N+    + S+IW  
Sbjct: 131 ------------------KIKNNFIDYSQPSPQPQIRRSSSMTARVNSIRNPKSSSIWDF 172

Query: 366 FKVGLVRTPEIELQELKLRNTNNAKRVNXXXXXXXXXXXSDIELKTGEKKKTERH----- 202
            ++GLVRTPEIEL+        NA+              S    KTG  +   R+     
Sbjct: 173 LRLGLVRTPEIELR----TTAGNARLSVSRNSSCSSTSTSSNSKKTGSGESRSRNRRRSF 228

Query: 201 LFESCRCSVDSVETVFIIKKKKVVNXXXXXXXXXXXXXXXXXXXXQALHHKRTFEWLKEL 22
           LF  C+CSV S ET+ +  K KV                       A+  KRTFEWLKEL
Sbjct: 229 LFSDCKCSV-STETMMVPVKIKV---ETEEKQRVMEKKTAKKEEKTAMARKRTFEWLKEL 284

Query: 21  S 19
           S
Sbjct: 285 S 285


>ref|NP_201536.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758434|dbj|BAB09020.1| unnamed protein product
           [Arabidopsis thaliana] gi|56550681|gb|AAV97794.1|
           At5g67350 [Arabidopsis thaliana]
           gi|59958292|gb|AAX12856.1| At5g67350 [Arabidopsis
           thaliana] gi|332010948|gb|AED98331.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 302

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 91/309 (29%), Positives = 128/309 (41%), Gaps = 18/309 (5%)
 Frame = -3

Query: 894 KWGDPNFDGDENEEEETLSLCDLPMCAANNGEKQEIIESKSLEAED-FDFGSCGGSLLIE 718
           ++ + + D +E EEEE LSLCDLP      GE + I++ +  E +  F+FG  G S    
Sbjct: 18  RYQEDDDDVEEEEEEEALSLCDLPN---EKGELRSIVKEEDEEFDSGFEFG-IGSSFRAG 73

Query: 717 SEMC-------AADELFFQGQILPLRLSVSSEPGIQQGGKVXXXXXXXXXXXXXXXXXXX 559
           S+ C        ADELFF+G+ILPLR SVS + G+ +  ++                   
Sbjct: 74  SDSCEPAPEMSTADELFFKGRILPLRHSVSLDAGLNEPTRLITRSESVEFRRTGIIRSDR 133

Query: 558 XXXXXXXXXXXXXXXXXXXXXXXTYKPKFRNQF--HSHPSPNPQIFSTSRLG---NASYP 394
                                      K +N F  +S PSP PQI  +S +    N+   
Sbjct: 134 ---------------------------KIKNNFIDYSQPSPQPQIRRSSSMTARVNSIRN 166

Query: 393 SRKSTIWGMFKVGLVRTPEIELQELKLRNTNNAKRVNXXXXXXXXXXXSDIELKTGEKKK 214
            + S+IW   ++GLVRTPEIEL+        NAK              S    K G  + 
Sbjct: 167 PKSSSIWDFLRLGLVRTPEIELR----TTAGNAKLSVSRNSSCSSTSTSSNSKKIGSGES 222

Query: 213 TERH-----LFESCRCSVDSVETVFIIKKKKVVNXXXXXXXXXXXXXXXXXXXXQALHHK 49
             R+     +F  C+CSV S ET     K KV +                     A+  K
Sbjct: 223 RSRNRRRSFMFSDCKCSV-STETKMAPVKIKVSSGETEEKQRMMEKKTAKKEEKSAMARK 281

Query: 48  RTFEWLKEL 22
           RTFEWL ++
Sbjct: 282 RTFEWLSQV 290


>ref|XP_004170929.1| PREDICTED: uncharacterized LOC101214997, partial [Cucumis sativus]
          Length = 238

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 73/202 (36%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
 Frame = -3

Query: 885 DPNFDGDENEEEETLSLCDLPMCAANNGEKQEIIESKSLEA----EDFDFGSCGGSLLIE 718
           D + D +E EEEE LSLCDLP+      EKQ+   S S       +DFDF          
Sbjct: 26  DDDDDEEEEEEEEALSLCDLPV-----KEKQQPTRSVSTTVVETDQDFDFNHWRPP---P 77

Query: 717 SEMCAADELFFQGQILPLRLSVSSEPGIQQGGKVXXXXXXXXXXXXXXXXXXXXXXXXXX 538
           S M  AD+LFFQG +LPLRLS SSE      G +                          
Sbjct: 78  SPMLTADDLFFQGHMLPLRLSFSSENSQNNNGNLWCRSESMDGNNMLRFRNESTSSSSSR 137

Query: 537 XXXXXXXXXXXXXXXXTY----KPKFRNQFHSHPSPNPQIFSTSRLGNASYPSRKSTIWG 370
                                 +P   N FHSHPSP PQI S S    +S+ SR S+ W 
Sbjct: 138 SHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFS---TSSHRSRSSSRWE 194

Query: 369 MFKVGLVRTPEIELQELKLRNT 304
            F++GL+RTP +EL +LK R T
Sbjct: 195 FFRLGLLRTPGMELHDLKTRTT 216


Top