BLASTX nr result

ID: Cimicifuga21_contig00018947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018947
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ...   157   2e-36
gb|ABK95981.1| unknown [Populus trichocarpa]                          152   5e-35
ref|XP_002516449.1| conserved hypothetical protein [Ricinus comm...   151   7e-35
ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ...   148   6e-34

>ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera]
           gi|296081665|emb|CBI20670.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  157 bits (396), Expect = 2e-36
 Identities = 71/98 (72%), Positives = 78/98 (79%)
 Frame = -2

Query: 294 VSSMEFTKSGDVEDIDLKRGMHRELWPLDAVDPTKASFPCCLVWAPLPVVSWLAPFIGHV 115
           V  ME     DVED+   R    ELWPLD +DP KA  PCCLVW PLPVVSWLAPFIGHV
Sbjct: 6   VPKMELNAINDVEDMSTARRTQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAPFIGHV 65

Query: 114 GICREDGTILDFSGSNFVNVNEFAYGAVARYLELDREQ 1
           GICREDG ILDF+GSNFVNVN+FA+GAVARYL+LDRE+
Sbjct: 66  GICREDGAILDFAGSNFVNVNDFAFGAVARYLQLDREK 103


>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  152 bits (383), Expect = 5e-35
 Identities = 67/97 (69%), Positives = 79/97 (81%)
 Frame = -2

Query: 291 SSMEFTKSGDVEDIDLKRGMHRELWPLDAVDPTKASFPCCLVWAPLPVVSWLAPFIGHVG 112
           S+M+   + DVE +     +  ELWPLD +DP KA FPCCL+W PLPVVSWLAPFIGHVG
Sbjct: 7   SAMDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVG 66

Query: 111 ICREDGTILDFSGSNFVNVNEFAYGAVARYLELDREQ 1
           ICREDGTILDFSGSNFVNV++F++GA ARY +LDREQ
Sbjct: 67  ICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQ 103


>ref|XP_002516449.1| conserved hypothetical protein [Ricinus communis]
           gi|223544269|gb|EEF45790.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score =  151 bits (382), Expect = 7e-35
 Identities = 68/95 (71%), Positives = 78/95 (82%)
 Frame = -2

Query: 285 MEFTKSGDVEDIDLKRGMHRELWPLDAVDPTKASFPCCLVWAPLPVVSWLAPFIGHVGIC 106
           M+   + DVE++    G   E WPLD VD  KA FPCCLVW PLPVVSWLAPFIGHVGIC
Sbjct: 1   MDIKGASDVENLKSASGFQHEFWPLDEVDLRKAKFPCCLVWTPLPVVSWLAPFIGHVGIC 60

Query: 105 REDGTILDFSGSNFVNVNEFAYGAVARYLELDREQ 1
           REDGTILDFSGS+FVN+++FA+GAVARYL+LDREQ
Sbjct: 61  REDGTILDFSGSSFVNIDDFAFGAVARYLQLDREQ 95


>ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  150 bits (378), Expect = 2e-34
 Identities = 66/95 (69%), Positives = 77/95 (81%)
 Frame = -2

Query: 285 MEFTKSGDVEDIDLKRGMHRELWPLDAVDPTKASFPCCLVWAPLPVVSWLAPFIGHVGIC 106
           M+   + DVE +     +  ELWPLD +DP KA FPCCL+W PLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 105 REDGTILDFSGSNFVNVNEFAYGAVARYLELDREQ 1
           REDGTILDFSGSNFVNV++F++GA ARY +LDREQ
Sbjct: 61  REDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQ 95


>ref|XP_003589015.1| Transmembrane protein [Medicago truncatula]
           gi|217072464|gb|ACJ84592.1| unknown [Medicago
           truncatula] gi|355478063|gb|AES59266.1| Transmembrane
           protein [Medicago truncatula]
           gi|388520819|gb|AFK48471.1| unknown [Medicago
           truncatula]
          Length = 236

 Score =  148 bits (374), Expect = 6e-34
 Identities = 67/95 (70%), Positives = 76/95 (80%)
 Frame = -2

Query: 285 MEFTKSGDVEDIDLKRGMHRELWPLDAVDPTKASFPCCLVWAPLPVVSWLAPFIGHVGIC 106
           ME   S D+E +  K+ M  +LWPLD +DP  A FPCCLVW PLPVVSWLAPFIGHVGIC
Sbjct: 2   MELNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGIC 61

Query: 105 REDGTILDFSGSNFVNVNEFAYGAVARYLELDREQ 1
           REDGT+LDFSGS  VNV++FA+G VARYLELDR Q
Sbjct: 62  REDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQ 96


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