BLASTX nr result

ID: Cimicifuga21_contig00018936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018936
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265970.1| PREDICTED: putative disease resistance prote...    78   6e-13
emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]    78   6e-13
emb|CBI35059.3| unnamed protein product [Vitis vinifera]               76   2e-12
gb|ABA92135.1| Leucine Rich Repeat family protein, expressed [Or...    75   7e-12
gb|AAN23087.1| putative rp3 protein [Zea mays]                         74   9e-12

>ref|XP_002265970.1| PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
          Length = 1211

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +1

Query: 1    IICLPEGMLQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHL 180
            ++ LP+G+LQ +T+LQ L +G+CS L  LPDWIGS+T+L++LQI DC  L  LP+ ++ L
Sbjct: 1090 LVSLPKGLLQ-VTSLQSLTIGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCL 1148

Query: 181  TNLQSLWIKYCHPELHRRCE 240
            + LQ+L I  C   L  RC+
Sbjct: 1149 STLQTLRISLCR-HLLERCQ 1167


>emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]
          Length = 1211

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +1

Query: 1    IICLPEGMLQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHL 180
            ++ LP+G+LQ +T+LQ L +G+CS L  LPDWIGS+T+L++LQI DC  L  LP+ ++ L
Sbjct: 1090 LVSLPKGLLQ-VTSLQSLTIGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCL 1148

Query: 181  TNLQSLWIKYCHPELHRRCE 240
            + LQ+L I  C   L  RC+
Sbjct: 1149 STLQTLRISLCR-HLLERCQ 1167


>emb|CBI35059.3| unnamed protein product [Vitis vinifera]
          Length = 1204

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/71 (50%), Positives = 53/71 (74%)
 Frame = +1

Query: 1    IICLPEGMLQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHL 180
            ++ LP+G+LQ +T+LQ L +G+CS L  LPDWIGS+T+L++LQI DC  L  LP+ ++ L
Sbjct: 891  LVSLPKGLLQ-VTSLQSLTIGDCSGLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCL 949

Query: 181  TNLQSLWIKYC 213
            + LQ+L I  C
Sbjct: 950  STLQTLRISLC 960


>gb|ABA92135.1| Leucine Rich Repeat family protein, expressed [Oryza sativa Japonica
            Group]
          Length = 895

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/76 (47%), Positives = 53/76 (69%)
 Frame = +1

Query: 13   PEGMLQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHLTNLQ 192
            PEGM Q LT+L  L+L  C S+  LP+W+G++T+L+ LQIW+C+ +  LP+ ++ LT L+
Sbjct: 805  PEGM-QYLTSLLSLHLSYCESISALPEWLGNLTSLKTLQIWECRGIKSLPESIEQLTMLE 863

Query: 193  SLWIKYCHPELHRRCE 240
             L I  C PEL + CE
Sbjct: 864  HLEISGC-PELKQWCE 878



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = +1

Query: 25  LQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHLTNLQSLWI 204
           ++ L +LQ L L  C  L  L +W GS+T+L++L I  C+ L   P+G+Q+LT+L SL +
Sbjct: 760 IRQLMSLQSLTLSSCQMLTSLGEWFGSLTSLQELHISHCQRLNSFPEGMQYLTSLLSLHL 819

Query: 205 KYC 213
            YC
Sbjct: 820 SYC 822


>gb|AAN23087.1| putative rp3 protein [Zea mays]
          Length = 1226

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = +1

Query: 1    IICLPEGMLQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHL 180
            + CLPE M Q+LT+L+ LNL  C+ L  LP+W+G ++ L+KL + DC+ LT LP  +Q L
Sbjct: 1129 LTCLPESM-QHLTSLRTLNLCRCNELTHLPEWLGELSVLQKLWLQDCRGLTSLPQSIQRL 1187

Query: 181  TNLQSLWIKYCHPELHRRC 237
            T L+ L+I   +P L RRC
Sbjct: 1188 TALEELYIS-GNPNLLRRC 1205



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)
 Frame = +1

Query: 25   LQNLTALQHLNLGECSSLICLPDWIGSITNLRKLQIWDCKNLTILPDGLQHLTNLQSLWI 204
            + +  ALQHL +   +SL CLP+ +  +T+LR L +  C  LT LP+ L  L+ LQ LW+
Sbjct: 1112 IDSCDALQHLTISSLTSLTCLPESMQHLTSLRTLNLCRCNELTHLPEWLGELSVLQKLWL 1171

Query: 205  KYC 213
            + C
Sbjct: 1172 QDC 1174


Top