BLASTX nr result

ID: Cimicifuga21_contig00018910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018910
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...   393   e-107
ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF...   393   e-107
ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF...   390   e-106
ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putativ...   389   e-106

>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score =  393 bits (1010), Expect = e-107
 Identities = 210/258 (81%), Positives = 220/258 (85%), Gaps = 10/258 (3%)
 Frame = -2

Query: 746 MKNGVEFLIRVSFIEIFKEEVFDLL----------EGASTTKPTAPSRVPIHIRETANGG 597
           MK+  EFLIRVSFIEIFKEEVFDLL          EG   TKPT P+RVPI IRET +GG
Sbjct: 125 MKDSTEFLIRVSFIEIFKEEVFDLLDPNSSATSKVEGVCVTKPTGPARVPIQIRETVSGG 184

Query: 596 ITLAGVTEPEVRTKEEMASYLSRGSLSRATGSTNMNSESSRSHAIFTITMEQKKSTRCHX 417
           ITLAGVTE EVRTKEEMASYLS GS +RATGSTNMNS+SSRSHAIFTI+MEQKK  R   
Sbjct: 185 ITLAGVTEAEVRTKEEMASYLSHGSTARATGSTNMNSQSSRSHAIFTISMEQKKIARV-- 242

Query: 416 XXXXXXXXXXDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINRGLLALGNVISALGD 237
                     DILCAKLHLVDLAGSERAKRTGADG+R KEGIHIN+GLLALGNVISALGD
Sbjct: 243 -GVSNDDVGDDILCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISALGD 301

Query: 236 DKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRARNI 57
           +KKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRARNI
Sbjct: 302 EKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNI 361

Query: 56  QNKAVINRDPMTAQMQRM 3
           QNKAVINRDPM AQMQRM
Sbjct: 362 QNKAVINRDPMAAQMQRM 379


>ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1299

 Score =  393 bits (1010), Expect = e-107
 Identities = 210/255 (82%), Positives = 221/255 (86%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746 MKNGVEFLIRVSFIEIFKEEVFDLLEG-------ASTTKPTAPSRVPIHIRETANGGITL 588
           MK   EFLIRVSFIEIFKEEVFDLL+        AST KP APSRVPI IRET NGGITL
Sbjct: 125 MKESSEFLIRVSFIEIFKEEVFDLLDPNSARGDMASTAKPAAPSRVPIQIRETVNGGITL 184

Query: 587 AGVTEPEVRTKEEMASYLSRGSLSRATGSTNMNSESSRSHAIFTITMEQKKSTRCHXXXX 408
           AGVTE EV+TKEEM+SYLSRGSLSRATGSTNMNS+SSRSHAIFTITMEQK          
Sbjct: 185 AGVTEAEVKTKEEMSSYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKNGD------- 237

Query: 407 XXXXXXXDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINRGLLALGNVISALGDDKK 228
                  D+LCAKLHLVDLAGSERAKRTGADG+RLKEGIHIN+GLLALGNVISALGD++K
Sbjct: 238 -------DVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDERK 290

Query: 227 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRARNIQNK 48
           RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRARNIQNK
Sbjct: 291 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNK 350

Query: 47  AVINRDPMTAQMQRM 3
           AVINRDP+ AQMQRM
Sbjct: 351 AVINRDPVGAQMQRM 365


>ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1317

 Score =  390 bits (1001), Expect = e-106
 Identities = 208/255 (81%), Positives = 219/255 (85%), Gaps = 7/255 (2%)
 Frame = -2

Query: 746 MKNGVEFLIRVSFIEIFKEEVFDLLEG-------ASTTKPTAPSRVPIHIRETANGGITL 588
           MK   EFLIRVSFIEIFKEEVFDLL+        A T KP  PSRVPI IRET NGGITL
Sbjct: 150 MKESSEFLIRVSFIEIFKEEVFDLLDHNSSRGDVAPTAKPAVPSRVPIQIRETVNGGITL 209

Query: 587 AGVTEPEVRTKEEMASYLSRGSLSRATGSTNMNSESSRSHAIFTITMEQKKSTRCHXXXX 408
           AGVTE EV+TKEEM+SYLSRGSLSRATGSTNMNS+SSRSHAIFTITMEQK          
Sbjct: 210 AGVTEAEVKTKEEMSSYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKSGD------- 262

Query: 407 XXXXXXXDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINRGLLALGNVISALGDDKK 228
                  D+LCAKLHLVDLAGSERAKRTGADG+RLKEGIHIN+GLLALGNVISALGD++K
Sbjct: 263 -------DVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDERK 315

Query: 227 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRARNIQNK 48
           RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRARNIQNK
Sbjct: 316 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNK 375

Query: 47  AVINRDPMTAQMQRM 3
           AVINRDP+ AQMQRM
Sbjct: 376 AVINRDPVGAQMQRM 390


>ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|222842822|gb|EEE80369.1|
           predicted protein [Populus trichocarpa]
          Length = 1290

 Score =  390 bits (1001), Expect = e-106
 Identities = 205/257 (79%), Positives = 219/257 (85%), Gaps = 10/257 (3%)
 Frame = -2

Query: 743 KNGVEFLIRVSFIEIFKEEVFDLL----------EGASTTKPTAPSRVPIHIRETANGGI 594
           +   EFLIRVSFIEIFKEEVFDLL          EG ++ KP  P+RVPI IRET NGGI
Sbjct: 124 QESTEFLIRVSFIEIFKEEVFDLLDPNSAVFSKAEGVNSAKPAVPARVPIQIRETVNGGI 183

Query: 593 TLAGVTEPEVRTKEEMASYLSRGSLSRATGSTNMNSESSRSHAIFTITMEQKKSTRCHXX 414
           TLAGVTE EVR KEEMASYLS GSL RATGSTNMNS+SSRSHAIFTITMEQKK + C   
Sbjct: 184 TLAGVTEAEVRNKEEMASYLSHGSLCRATGSTNMNSQSSRSHAIFTITMEQKKISSC-PS 242

Query: 413 XXXXXXXXXDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINRGLLALGNVISALGDD 234
                    D+LCAKLHLVDLAGSERAKRTGADG+R KEGIHIN+GLLALGNVISALGD+
Sbjct: 243 GVNNDEFGDDMLCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISALGDE 302

Query: 233 KKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRARNIQ 54
           KKRKEGGH+PYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRARNIQ
Sbjct: 303 KKRKEGGHIPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQ 362

Query: 53  NKAVINRDPMTAQMQRM 3
           NKAV+NRDPM+AQMQRM
Sbjct: 363 NKAVVNRDPMSAQMQRM 379


>ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
           gi|223547129|gb|EEF48626.1| Chromosome-associated
           kinesin KIF4A, putative [Ricinus communis]
          Length = 1290

 Score =  389 bits (999), Expect = e-106
 Identities = 211/260 (81%), Positives = 225/260 (86%), Gaps = 12/260 (4%)
 Frame = -2

Query: 746 MKNGVEFLIRVSFIEIFKEEVFDLLE---GAST--------TKPTA-PSRVPIHIRETAN 603
           MK+  EFLIRVSFIEIFKEEVFDLL+   GAS+         KP A P+RVPI IRET N
Sbjct: 129 MKDSTEFLIRVSFIEIFKEEVFDLLDSNLGASSKGEGAVYIAKPAALPTRVPIQIRETVN 188

Query: 602 GGITLAGVTEPEVRTKEEMASYLSRGSLSRATGSTNMNSESSRSHAIFTITMEQKKSTRC 423
           GGITLAGVTE EVRTKEEMASYLSRGSLSRATGSTNMNS+SSRSHAIFTI+MEQKK +  
Sbjct: 189 GGITLAGVTEAEVRTKEEMASYLSRGSLSRATGSTNMNSQSSRSHAIFTISMEQKKLSH- 247

Query: 422 HXXXXXXXXXXXDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINRGLLALGNVISAL 243
           +           DILCAKLHLVDLAGSERAKRTGADG+R KEGIHIN+GLLALGNVISAL
Sbjct: 248 NADETNHDDFGDDILCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISAL 307

Query: 242 GDDKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRAR 63
           GD+KKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRAR
Sbjct: 308 GDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRAR 367

Query: 62  NIQNKAVINRDPMTAQMQRM 3
           NIQNKAV+NRDPM AQ+QRM
Sbjct: 368 NIQNKAVVNRDPMAAQLQRM 387


Top