BLASTX nr result

ID: Cimicifuga21_contig00018894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018894
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32913.3| unnamed protein product [Vitis vinifera]               62   5e-08
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    62   5e-08
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    57   2e-06
gb|ACZ74691.1| cyclin-like F-box [Phaseolus vulgaris]                  55   5e-06

>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +3

Query: 129 LPDTLIYYILLFLPTKDAVGASILSTRWKYMWTSVHILEFDE 254
           LPD L+ +IL FLPTK AVG SILS RW+Y+W SV IL+FD+
Sbjct: 15  LPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDD 56


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +3

Query: 129 LPDTLIYYILLFLPTKDAVGASILSTRWKYMWTSVHILEFDE 254
           LPD L+ +IL FLPTK AVG SILS RW+Y+W SV IL+FD+
Sbjct: 15  LPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDD 56


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/45 (51%), Positives = 35/45 (77%)
 Frame = +3

Query: 129 LPDTLIYYILLFLPTKDAVGASILSTRWKYMWTSVHILEFDEGIV 263
           LPD ++ +I+ FLPTK AVG S+LS RW+Y+W S+  L+FD+ ++
Sbjct: 15  LPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLL 59


>ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500401|gb|AES81604.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/46 (54%), Positives = 34/46 (73%)
 Frame = +3

Query: 129 LPDTLIYYILLFLPTKDAVGASILSTRWKYMWTSVHILEFDEGIVE 266
           LPD++++ IL FLPTK  V  S+LS RWK++W SV  L+FD G +E
Sbjct: 25  LPDSILFEILYFLPTKLVVTTSVLSKRWKHVWLSVLALDFDSGGIE 70


>gb|ACZ74691.1| cyclin-like F-box [Phaseolus vulgaris]
          Length = 444

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +3

Query: 132 PDTLIYYILLFLPTKDAVGASILSTRWKYMWTSVHILEFD 251
           PD+++ YIL FLPTKD V  S+LS RWK +W SV  ++FD
Sbjct: 9   PDSILCYILSFLPTKDVVATSVLSKRWKLLWLSVTSMDFD 48


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