BLASTX nr result

ID: Cimicifuga21_contig00018891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018891
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19274.3| unnamed protein product [Vitis vinifera]               75   5e-11
emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]    75   5e-11
ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245...    74   7e-11
ref|XP_001769445.1| predicted protein [Physcomitrella patens sub...    60   1e-06

>emb|CBI19274.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 57/149 (38%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
 Frame = -1

Query: 1142 STCNETGVTQLSIPSISAAVPSGPEDTSLGS----QIQQVPHY--------KGTLNMTSK 999
            +T +    T  +  S ++A P+ P +    S    Q QQ+            G+L    K
Sbjct: 285  TTSSSIAGTNPNATSSNSAFPATPAEALPASTNISQAQQLSQQGPVSTLSQMGSLGSAPK 344

Query: 998  SRVLSAKKGPSVTFKTLSGPNPMIQXXXXXXXXXXATPSTAASLLKAAQSKNVVHIRHGG 819
            SR  S K     TF + S    M++          ATPS AASLLK AQS+N VHI  GG
Sbjct: 345  SRATSKKTSAKSTFSSQS----MLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGG 400

Query: 818  GPLIK--IPGSAIKSLPTNHLGSHPNVHY 738
              LIK  + G A   LP NHLG+HPNVHY
Sbjct: 401  STLIKSSVAGGA-NPLPANHLGAHPNVHY 428


>emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]
          Length = 598

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 57/149 (38%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
 Frame = -1

Query: 1142 STCNETGVTQLSIPSISAAVPSGPEDTSLGS----QIQQVPHY--------KGTLNMTSK 999
            +T +    T  +  S ++A P+ P +    S    Q QQ+            G+L    K
Sbjct: 248  TTSSSIAGTNPNATSSNSAFPATPAEALPASTNISQAQQLSQQGPVSTLSQMGSLGSAPK 307

Query: 998  SRVLSAKKGPSVTFKTLSGPNPMIQXXXXXXXXXXATPSTAASLLKAAQSKNVVHIRHGG 819
            SR  S K     TF + S    M++          ATPS AASLLK AQS+N VHI  GG
Sbjct: 308  SRATSKKTSAKSTFSSQS----MLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGG 363

Query: 818  GPLIK--IPGSAIKSLPTNHLGSHPNVHY 738
              LIK  + G A   LP NHLG+HPNVHY
Sbjct: 364  STLIKSSVAGGA-NPLPANHLGAHPNVHY 391


>ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245507 [Vitis vinifera]
          Length = 606

 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 47/97 (48%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
 Frame = -1

Query: 1022 GTLNMTSKSRVLSAKKGPSVTFKTLSGPNPMIQXXXXXXXXXXATPSTAASLLKAAQSKN 843
            G+L    KSR  S K     TF + S    M++          ATPS AASLLK AQS+N
Sbjct: 308  GSLGSAPKSRATSKKTSAKSTFSSQS----MLKATAVAAGARIATPSAAASLLKDAQSRN 363

Query: 842  VVHIRHGGGPLIK--IPGSAIKSLPTNHLGSHPNVHY 738
             VHI  GG  LIK  + G A   LP NHLG+HPNVHY
Sbjct: 364  AVHIMPGGSTLIKSSVAGGA-NPLPANHLGAHPNVHY 399


>ref|XP_001769445.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162679365|gb|EDQ65814.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 682

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 46/109 (42%), Positives = 57/109 (52%)
 Frame = -1

Query: 1052 SQIQQVPHYKGTLNMTSKSRVLSAKKGPSVTFKTLSGPNPMIQXXXXXXXXXXATPSTAA 873
            S +     Y  + NMT+        +G S   K + GP+PMIQ          A  STAA
Sbjct: 430  SSVPMDSKYSASRNMTT-----GVSRGGS---KGVHGPDPMIQAAAMAAGARIAPASTAA 481

Query: 872  SLLKAAQSKNVVHIRHGGGPLIKIPGSAIKSLPTNHLGSHPNVHYIRTG 726
            SLLKAAQS NVVHI  GG P  K+ G + ++   N  GS   +HYIRTG
Sbjct: 482  SLLKAAQSGNVVHIGSGGLPRSKL-GLSNQAGNGNAGGSSGIIHYIRTG 529


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