BLASTX nr result
ID: Cimicifuga21_contig00018887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018887
(1835 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 518 e-144
emb|CBI32615.3| unnamed protein product [Vitis vinifera] 518 e-144
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici... 500 e-139
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 483 e-134
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 473 e-130
>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
Length = 1575
Score = 518 bits (1333), Expect = e-144
Identities = 275/497 (55%), Positives = 351/497 (70%), Gaps = 8/497 (1%)
Frame = +2
Query: 311 EIISKLTESDDPSIQ--LAVLTELCEALSFCPVGSISSKPSETLAPVLVSLAKQETSPDI 484
+I+ LTE+D+ + LA LTELCE LSFC S+SS ++LAPVLV AK E++PDI
Sbjct: 118 KILVTLTEADEVDVSGVLAALTELCEVLSFCTESSLSSLTVDSLAPVLVKHAKHESNPDI 177
Query: 485 MLFAIRAITYLCEASPESKGFLVGHGVIDAICAPLRVIQYLDVAEQCLQALEKISRNHPV 664
ML AIRAITYLC+ P S G L HGV+ A+C L I+YLDVAEQCLQALEKISR+ P+
Sbjct: 178 MLLAIRAITYLCDVFPRSSGLLSRHGVVPALCERLMAIEYLDVAEQCLQALEKISRDQPL 237
Query: 665 RCLQAGVIMTILSFIDFFCPSDQRLGITIIANICKKLPSDSSSQFMEAVPVLCNLLHYED 844
CLQ+G IM +L++IDFF + QR+ ++ + NICKKLPS+ ++ FM AVP LCNLL YED
Sbjct: 238 ACLQSGAIMAVLNYIDFFSTTVQRVALSTVVNICKKLPSECTAPFMLAVPSLCNLLQYED 297
Query: 845 QKLVENVATCLSRIVKKASHSPEMVDELCKHGLIHQVVNLVALNSGNIHTQPIYTGLIRL 1024
++LVENVA CL +IV++ PEM++ELCKHGLI Q +L+ LNS +QPIYTGLI
Sbjct: 298 RQLVENVAICLIKIVERVRTYPEMLNELCKHGLIQQATHLIDLNSRTTLSQPIYTGLIGS 357
Query: 1025 LSQLASNSITASNTLFELNICNTLKQILCSYDQSVSRPYSLVGTDAQYNQIYEVMKXXXX 1204
L +LAS S+ A TLFELNI + LK IL +YD S P S+ D NQ+ EV+K
Sbjct: 358 LVKLASGSVVAVRTLFELNISSILKDILSTYDLSHGIP-SVNMVDGHCNQVCEVLK-LLN 415
Query: 1205 XXXXXXTNGEDNMEVSDKEKITAHQPELLRQFGVDILPVLVQVVNSGADLYVSYGCLSVI 1384
+D V DKE A+QP+LL++FG DILP+L+QVV+SGA+LYV YGCLS+I
Sbjct: 416 ALLPTSARDQDVQMVLDKESFLANQPDLLQKFGNDILPILMQVVSSGANLYVCYGCLSII 475
Query: 1385 NKIVYFSRSDMLVELLNNTNISSFLAGIIARKEHHLLMLALTMVKTVMQELPDAFLESFT 1564
NK+VYFS+SD L+ELLNNTNISSFLAG+ RKEHH+L++AL +V+T++Q+L D F SF
Sbjct: 476 NKLVYFSKSDNLLELLNNTNISSFLAGVFTRKEHHVLIIALQIVETLLQKLSDTFSNSFI 535
Query: 1565 KEGIVHAIDALVTPEKGSQFTFQQSSTTLILSRSNQKRAANDALRCLCY------HPSSP 1726
KEG+ A+DAL+TPEK SQ F S T SNQ+ AA + RCLCY S+
Sbjct: 536 KEGVFFAVDALLTPEKCSQLKFPVLSGTHFSIDSNQRHAAKEVFRCLCYAFDNDQFSSAS 595
Query: 1727 KIETCKLEETSVHTFTK 1777
++E CKLE+ SVH K
Sbjct: 596 EMENCKLEKDSVHNLAK 612
>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
Length = 1487
Score = 518 bits (1333), Expect = e-144
Identities = 275/497 (55%), Positives = 351/497 (70%), Gaps = 8/497 (1%)
Frame = +2
Query: 311 EIISKLTESDDPSIQ--LAVLTELCEALSFCPVGSISSKPSETLAPVLVSLAKQETSPDI 484
+I+ LTE+D+ + LA LTELCE LSFC S+SS ++LAPVLV AK E++PDI
Sbjct: 118 KILVTLTEADEVDVSGVLAALTELCEVLSFCTESSLSSLTVDSLAPVLVKHAKHESNPDI 177
Query: 485 MLFAIRAITYLCEASPESKGFLVGHGVIDAICAPLRVIQYLDVAEQCLQALEKISRNHPV 664
ML AIRAITYLC+ P S G L HGV+ A+C L I+YLDVAEQCLQALEKISR+ P+
Sbjct: 178 MLLAIRAITYLCDVFPRSSGLLSRHGVVPALCERLMAIEYLDVAEQCLQALEKISRDQPL 237
Query: 665 RCLQAGVIMTILSFIDFFCPSDQRLGITIIANICKKLPSDSSSQFMEAVPVLCNLLHYED 844
CLQ+G IM +L++IDFF + QR+ ++ + NICKKLPS+ ++ FM AVP LCNLL YED
Sbjct: 238 ACLQSGAIMAVLNYIDFFSTTVQRVALSTVVNICKKLPSECTAPFMLAVPSLCNLLQYED 297
Query: 845 QKLVENVATCLSRIVKKASHSPEMVDELCKHGLIHQVVNLVALNSGNIHTQPIYTGLIRL 1024
++LVENVA CL +IV++ PEM++ELCKHGLI Q +L+ LNS +QPIYTGLI
Sbjct: 298 RQLVENVAICLIKIVERVRTYPEMLNELCKHGLIQQATHLIDLNSRTTLSQPIYTGLIGS 357
Query: 1025 LSQLASNSITASNTLFELNICNTLKQILCSYDQSVSRPYSLVGTDAQYNQIYEVMKXXXX 1204
L +LAS S+ A TLFELNI + LK IL +YD S P S+ D NQ+ EV+K
Sbjct: 358 LVKLASGSVVAVRTLFELNISSILKDILSTYDLSHGIP-SVNMVDGHCNQVCEVLK-LLN 415
Query: 1205 XXXXXXTNGEDNMEVSDKEKITAHQPELLRQFGVDILPVLVQVVNSGADLYVSYGCLSVI 1384
+D V DKE A+QP+LL++FG DILP+L+QVV+SGA+LYV YGCLS+I
Sbjct: 416 ALLPTSARDQDVQMVLDKESFLANQPDLLQKFGNDILPILMQVVSSGANLYVCYGCLSII 475
Query: 1385 NKIVYFSRSDMLVELLNNTNISSFLAGIIARKEHHLLMLALTMVKTVMQELPDAFLESFT 1564
NK+VYFS+SD L+ELLNNTNISSFLAG+ RKEHH+L++AL +V+T++Q+L D F SF
Sbjct: 476 NKLVYFSKSDNLLELLNNTNISSFLAGVFTRKEHHVLIIALQIVETLLQKLSDTFSNSFI 535
Query: 1565 KEGIVHAIDALVTPEKGSQFTFQQSSTTLILSRSNQKRAANDALRCLCY------HPSSP 1726
KEG+ A+DAL+TPEK SQ F S T SNQ+ AA + RCLCY S+
Sbjct: 536 KEGVFFAVDALLTPEKCSQLKFPVLSGTHFSIDSNQRHAAKEVFRCLCYAFDNDQFSSAS 595
Query: 1727 KIETCKLEETSVHTFTK 1777
++E CKLE+ SVH K
Sbjct: 596 EMENCKLEKDSVHNLAK 612
>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
putative [Ricinus communis]
Length = 1561
Score = 500 bits (1287), Expect = e-139
Identities = 262/496 (52%), Positives = 337/496 (67%), Gaps = 6/496 (1%)
Frame = +2
Query: 317 ISKLTESDDPSIQLAVLTELCEALSFCPVGSISSKPSETLAPVLVSLAKQETSPDIMLFA 496
+S L+E +PS QLA LT+LCE LSFC S+SS ++TL+PVLV LA+ E++PD+ML A
Sbjct: 111 LSNLSEGTEPSGQLAALTDLCEVLSFCTDDSLSSMMADTLSPVLVRLARHESNPDVMLLA 170
Query: 497 IRAITYLCEASPESKGFLVGHGVIDAICAPLRVIQYLDVAEQCLQALEKISRNHPVRCLQ 676
IRA+TYLC+A P + +LV H + +C L I+YLDVAEQCLQALEKISR P+ CLQ
Sbjct: 171 IRALTYLCDACPRASSYLVRHDAVPVLCERLMAIEYLDVAEQCLQALEKISREQPLPCLQ 230
Query: 677 AGVIMTILSFIDFFCPSDQRLGITIIANICKKLPSDSSSQFMEAVPVLCNLLHYEDQKLV 856
AG IM +LSFIDFF S QR+ ++ + NICKKLP++ S FMEAVP LCN+L YED++LV
Sbjct: 231 AGAIMAVLSFIDFFSTSVQRVSLSTVVNICKKLPTECPSPFMEAVPTLCNILQYEDRQLV 290
Query: 857 ENVATCLSRIVKKASHSPEMVDELCKHGLIHQVVNLVALNSGNIHTQPIYTGLIRLLSQL 1036
E+V CL +I ++ S S EM+DE CKHGLI Q +L+ LNS +QPIY GLI LL +L
Sbjct: 291 ESVVICLMKIAERVSQSSEMMDEFCKHGLIDQAAHLIHLNSRTTLSQPIYNGLIGLLVKL 350
Query: 1037 ASNSITASNTLFELNICNTLKQILCSYDQSVSRPYSLVGTDAQYNQIYEVMKXXXXXXXX 1216
+S SI A +L ELNI +TLK IL +YD S SL D Q NQ+ EV+K
Sbjct: 351 SSGSIVAFRSLHELNISSTLKDILATYDVSHGMS-SLHTVDGQSNQVNEVLKLLNELLPQ 409
Query: 1217 XXTNGEDNMEVSDKEKITAHQPELLRQFGVDILPVLVQVVNSGADLYVSYGCLSVINKIV 1396
+ + E SDKE + P+LL +FG DILP+LVQVVNSGA++YV YGCLSVI K+V
Sbjct: 410 VVKDQDVQQEASDKESFLVNHPDLLLKFGSDILPMLVQVVNSGANIYVCYGCLSVIKKLV 469
Query: 1397 YFSRSDMLVELLNNTNISSFLAGIIARKEHHLLMLALTMVKTVMQELPDAFLESFTKEGI 1576
FS+SDMLVELL NISSFLAG+ RK+HH+L+LAL + + ++Q D FL SF KEG+
Sbjct: 470 SFSKSDMLVELLKTANISSFLAGVFTRKDHHVLILALQIAEVILQRFSDVFLNSFIKEGV 529
Query: 1577 VHAIDALVTPEKGSQFTFQQSSTTLILSRSNQKRAANDALRCLCY------HPSSPKIET 1738
AIDAL+TPEK S F + + S+QK A+ L+CLCY P S +
Sbjct: 530 FFAIDALMTPEKCSHSMFLSCNGIQLPPESSQKLASKAVLKCLCYAFDTGQSPISLETAA 589
Query: 1739 CKLEETSVHTFTKFCS 1786
CK+E+ SV + + S
Sbjct: 590 CKIEKDSVQSLAEHIS 605
>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
Length = 1557
Score = 483 bits (1243), Expect = e-134
Identities = 251/490 (51%), Positives = 338/490 (68%), Gaps = 6/490 (1%)
Frame = +2
Query: 314 IISKLTESDDPSIQLAVLTELCEALSFCPVGSISSKPSETLAPVLVSLAKQETSPDIMLF 493
IIS L+ +PS+QLAVLTELCE LSFC GSISS S+ L+P+LV LA+ E++PDIMLF
Sbjct: 106 IISSLSGLTEPSLQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQHESNPDIMLF 165
Query: 494 AIRAITYLCEASPESKGFLVGHGVIDAICAPLRVIQYLDVAEQCLQALEKISRNHPVRCL 673
+IRAITY+C+ P S FLV H + +C L I+Y DVAEQCLQALEKISR P+ CL
Sbjct: 166 SIRAITYICDLYPRSAAFLVRHDAVTTLCQRLLAIEYQDVAEQCLQALEKISREQPLACL 225
Query: 674 QAGVIMTILSFIDFFCPSDQRLGITIIANICKKLPSDSSSQFMEAVPVLCNLLHYEDQKL 853
QAG IM +L++IDFF S QR+ + + NICKKLPS+S S FMEAVP+LCNLL YED++L
Sbjct: 226 QAGTIMAVLNYIDFFSTSTQRVALATVVNICKKLPSESPSPFMEAVPILCNLLQYEDRQL 285
Query: 854 VENVATCLSRIVKKASHSPEMVDELCKHGLIHQVVNLVALNSGNIHTQPIYTGLIRLLSQ 1033
VENVATCL +IV++ + S EM+DELC HGLI QV +L++LN + IY GLI LL +
Sbjct: 286 VENVATCLIKIVERVAQSSEMLDELCNHGLIQQVTHLLSLNGQTSLSPLIYNGLIGLLVK 345
Query: 1034 LASNSITASNTLFELNICNTLKQILCSYDQSVSRPYSLVGTDAQYNQIYEVMKXXXXXXX 1213
L+S S+ A TL+ELNI + L++IL ++D S SL+ N++YE +K
Sbjct: 346 LSSGSLVAFRTLYELNISSILREILSTFDLSHGVSTSLL-VGGHCNRVYEALKLLNELLP 404
Query: 1214 XXXTNGEDNMEVSDKEKITAHQPELLRQFGVDILPVLVQVVNSGADLYVSYGCLSVINKI 1393
+ D + + DKE + P+LLR+ G+D+ P+L+QV NSGA LYV YG LSV+ K+
Sbjct: 405 VRAKDENDQL-MLDKESFLDNSPDLLRRLGMDVFPMLIQVFNSGASLYVCYGSLSVMYKL 463
Query: 1394 VYFSRSDMLVELLNNTNISSFLAGIIARKEHHLLMLALTMVKTVMQELPDAFLESFTKEG 1573
V S+SDMLV LL N NISSFLAG+ RK+HH+LMLAL + + ++Q D FL+ F KEG
Sbjct: 464 VSLSKSDMLVALLKNANISSFLAGVFTRKDHHMLMLALQIAEIILQNFSDDFLKLFVKEG 523
Query: 1574 IVHAIDALVTPEKGSQFTFQQSSTTLILSRSNQKRAANDALRCLCY------HPSSPKIE 1735
+ AI+AL+TPE+ S+ + + S+QK ++ DAL+CLC+ P+S +
Sbjct: 524 VFFAIEALLTPERSSKLMYPAFGGIQLSLDSSQKSSSRDALKCLCFAFSTGQSPTSLEAR 583
Query: 1736 TCKLEETSVH 1765
CKL++ S++
Sbjct: 584 NCKLDKDSLY 593
>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
Length = 1558
Score = 473 bits (1216), Expect = e-130
Identities = 247/496 (49%), Positives = 336/496 (67%), Gaps = 8/496 (1%)
Frame = +2
Query: 314 IISKLTESDDPSIQLAVLTELCEALSFCPVGSISSKPSETLAPVLVSLAKQETSPDIMLF 493
II L+ +PS QLAVLTELCE LSFC GSISS S+ L+P+LV LA+ E++PDIMLF
Sbjct: 106 IIYSLSGQSEPSSQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQNESNPDIMLF 165
Query: 494 AIRAITYLCEASPESKGFLVGHGVIDAICAPLRVIQYLDVAEQCLQALEKISRNHPVRCL 673
+IRAITY+C+ P S FLV H + +C L I+Y DVAEQCLQALEKISR P+ CL
Sbjct: 166 SIRAITYICDLYPRSAAFLVHHDAVPTLCQRLLAIEYQDVAEQCLQALEKISREQPLACL 225
Query: 674 QAGVIMTILSFIDFFCPSDQRLGITIIANICKKLPSDSSSQFMEAVPVLCNLLHYEDQKL 853
QAG IM +L++IDFF S QR+ ++ + NICKKLPS+S S FMEAVP+LCNLL YED++L
Sbjct: 226 QAGAIMAVLNYIDFFSTSIQRVALSTVVNICKKLPSESPSPFMEAVPILCNLLQYEDRQL 285
Query: 854 VENVATCLSRIVKKASHSPEMVDELCKHGLIHQVVNLVALNSGNIHTQPIYTGLIRLLSQ 1033
VENVATCL +IV++ S EM+DELC HGLI QV +L++LN + IY GLI LL +
Sbjct: 286 VENVATCLIKIVERVVQSSEMLDELCNHGLIPQVTHLLSLNGRTSLSPLIYNGLIGLLVK 345
Query: 1034 LASNSITASNTLFELNICNTLKQILCSYDQS--VSRPYSLVGTDAQYNQIYEVMKXXXXX 1207
L+S S+ A TL+ELNI + L++IL ++D S VS + G NQ+YE +K
Sbjct: 346 LSSGSLVAFRTLYELNISSILREILSTFDLSHGVSTSQHVGG---HCNQVYEALKLLNEL 402
Query: 1208 XXXXXTNGEDNMEVSDKEKITAHQPELLRQFGVDILPVLVQVVNSGADLYVSYGCLSVIN 1387
+ D + + +KE P+LL++ G+D+ P+L++V NSGA +YV +GCLSV+
Sbjct: 403 LPVQAKDQNDQL-MLNKESFLESSPDLLQRLGMDVFPMLIKVFNSGASIYVCHGCLSVMY 461
Query: 1388 KIVYFSRSDMLVELLNNTNISSFLAGIIARKEHHLLMLALTMVKTVMQELPDAFLESFTK 1567
K+V +SDMLVELL N NISSFLAG+ +K+HH+LMLAL + + ++Q D FL+ F K
Sbjct: 462 KLVSLRKSDMLVELLKNANISSFLAGVFTQKDHHMLMLALQIAEIILQNFSDNFLKLFVK 521
Query: 1568 EGIVHAIDALVTPEKGSQFTFQQSSTTLILSRSNQKRAANDALRCLCY------HPSSPK 1729
EG+ AIDAL+TPE+ S+ + + +QK ++ D L+CLCY P+S +
Sbjct: 522 EGVFFAIDALLTPERSSKLMYPAFGGIQLSLDCSQKSSSRDTLKCLCYAFSTSQSPTSSE 581
Query: 1730 IETCKLEETSVHTFTK 1777
CKL++ S++ +
Sbjct: 582 TRNCKLDKDSLYNLAE 597