BLASTX nr result

ID: Cimicifuga21_contig00018874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018874
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27124.3| unnamed protein product [Vitis vinifera]              186   7e-45
ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002514530.1| conserved hypothetical protein [Ricinus comm...   180   4e-43
ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43
ref|XP_004135128.1| PREDICTED: uncharacterized protein LOC101207...   173   4e-41

>emb|CBI27124.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  186 bits (471), Expect = 7e-45
 Identities = 113/235 (48%), Positives = 139/235 (59%), Gaps = 12/235 (5%)
 Frame = +2

Query: 116 MKDKGKAVAVXXXXXXXXXXXXXXXDLPCKKHPSSSSVGICAQCLKDRLIKLVCSDCGEQ 295
           MK++GKAV                 DLPC+KHPSSSSVGICA CLKDRLIKLVCSDCGEQ
Sbjct: 1   MKERGKAVETYGGSCFADYYSTS--DLPCRKHPSSSSVGICAYCLKDRLIKLVCSDCGEQ 58

Query: 296 RLXXXXXXXXXXXXNPNSCVVDIGSVGRISFLLENDKEKNDVCHSHSSVKS--RSEATGL 469
           RL             PNSC V++GSVGRISFL+EN  E+ +V HS+S +KS  +SE   L
Sbjct: 59  RLSSCSCSEISSI--PNSCTVEVGSVGRISFLIEN--ERGEVSHSNSKLKSEEKSEQVVL 114

Query: 470 LKRSSSTSTSVADVKKGGFWRFGRLFRKKRERDNEFLEKNVGGVDEKSEIWDVENRGVSR 649
           LKRSSS+S    ++K+  FW  GRLFRKKR++          G D+KSE W  +  GVSR
Sbjct: 115 LKRSSSSS---VEIKRSRFWGIGRLFRKKRDK----------GFDDKSEGWMFDYMGVSR 161

Query: 650 SRSVCSFRG----------CFDDYEGSSVISNGRPSDLISKDGHGDSEKRSGGFN 784
           SRS+CSFRG              +  +S ++   P DL  K G  + E R  GF+
Sbjct: 162 SRSLCSFRGGGYNESEDGDLAHSHARTSGVNGALPFDLDKKSGFSEEEARRSGFS 216


>ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|222865017|gb|EEF02148.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  181 bits (458), Expect = 2e-43
 Identities = 112/255 (43%), Positives = 145/255 (56%), Gaps = 32/255 (12%)
 Frame = +2

Query: 116 MKDKGKAVAVXXXXXXXXXXXXXXXDLPCKKHPSSSSVGICAQCLKDRLIKLVCSDCGEQ 295
           MK++GKAV +               DLPCKKHPSSSSVGICA CLKDRL+ LVCSDCGEQ
Sbjct: 1   MKERGKAVEMYSNDLFDQDYSTSS-DLPCKKHPSSSSVGICAHCLKDRLVNLVCSDCGEQ 59

Query: 296 RLXXXXXXXXXXXXNPNSCVVDIGSVGRISFLLENDKEKNDVCHSHSSVKSRSEATG--- 466
           RL            N NSC V++GSVGRISFL+EN+K+KND     S++ ++ +++    
Sbjct: 60  RL--SSCSCSEISSNRNSCTVEVGSVGRISFLIENEKQKNDQVSQSSNITAKPKSSSKDQ 117

Query: 467 -------LLKRSSSTSTSVADVKKGGFWRFGRLFRKKRERDNEFLEKNVGGVDEKSEIWD 625
                  +LKRSSS+   +   +K GFWR GRLF KKR +  +    +VGG +EKS++W 
Sbjct: 118 KGDELNFMLKRSSSSCVEIK--RKSGFWRIGRLFSKKRGKGCD--RSSVGGFEEKSDVWV 173

Query: 626 VENRGVSRSRSVCSFR--GCFDDYEGS-----SVISNGRPS---------------DLIS 739
           V+  GVSR RS+CSFR  G F   +G+     S IS  R S               D   
Sbjct: 174 VDYMGVSRCRSLCSFRGGGFFGSEDGTFSGARSSISAARSSISAARNSGVNGGLLFDPDR 233

Query: 740 KDGHGDSEKRSGGFN 784
           K G  ++E R  GF+
Sbjct: 234 KSGFSEAEPRKSGFD 248


>ref|XP_002514530.1| conserved hypothetical protein [Ricinus communis]
           gi|223546134|gb|EEF47636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  180 bits (456), Expect = 4e-43
 Identities = 116/268 (43%), Positives = 147/268 (54%), Gaps = 45/268 (16%)
 Frame = +2

Query: 116 MKDKGKAVAVXXXXXXXXXXXXXXXDLPCKKHPSSSSVGICAQCLKDRLIKLVCSDCGEQ 295
           MK++GKAV V               DLPCKKHPSSSSVGICA CLKDRL+KLVCSDCGEQ
Sbjct: 1   MKERGKAVEVFNDDQEYYTSSYY--DLPCKKHPSSSSVGICAYCLKDRLVKLVCSDCGEQ 58

Query: 296 RLXXXXXXXXXXXXNPNSCVVDIGSVGRISFLLENDKEKNDVCHSHSSVKSRSEATG--- 466
           RL            N NSC V++GSVGRISFL+END ++N+  +S SS + +S+A     
Sbjct: 59  RL--SSCSCSEISSNRNSCTVEVGSVGRISFLIENDNQRNE-GNSSSSSQFQSQANSNKP 115

Query: 467 ------------LLKRSSSTSTSVADVKKGGFWRFGRLFRKKRERDNEFLEKN------- 589
                       LLKRSSS+   +   +K GFWR G+LF KKRE+ N     N       
Sbjct: 116 KICREKTTDDVFLLKRSSSSCVEIK--RKSGFWRIGKLFSKKREKGNNDNNNNNNNCERS 173

Query: 590 -VGGVDEKSEIWDVENRGVSRSRSVCSFR--GCFDDYEG--------------------S 700
            VGG +EKS++W V+  GVSRSRS+CSFR  G F   +G                    +
Sbjct: 174 SVGGFEEKSDLWVVDYMGVSRSRSLCSFRGGGFFGSEDGTFSGARSSMSAARSSISAARN 233

Query: 701 SVISNGRPSDLISKDGHGDSEKRSGGFN 784
           S ++ G   D   K G  ++E R  G++
Sbjct: 234 SGVNGGLLFDPDRKSGFSEAEPRKSGYD 261


>ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|222852170|gb|EEE89717.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  179 bits (454), Expect = 6e-43
 Identities = 114/255 (44%), Positives = 146/255 (57%), Gaps = 32/255 (12%)
 Frame = +2

Query: 116 MKDKGKAVAVXXXXXXXXXXXXXXXDLPCKKHPSSSSVGICAQCLKDRLIKLVCSDCGEQ 295
           MK++GKAV +               DLPCKKHPSSSSVGICA CLKDRL+ LVCSDCGEQ
Sbjct: 1   MKERGKAVEMHNNDLFDQDYCTSS-DLPCKKHPSSSSVGICAYCLKDRLVNLVCSDCGEQ 59

Query: 296 RLXXXXXXXXXXXXNPNSCVVDIGSVGRISFLLENDKEKND-VCHSHSSVKSRSEATG-- 466
           RL            N NSC V++GSVGRISFL+EN+ +KND V HS+SS  +   ++G  
Sbjct: 60  RL--SSCSCSEISSNRNSCTVEVGSVGRISFLIENENQKNDQVLHSNSSTANPKSSSGDQ 117

Query: 467 -------LLKRSSSTSTSVADVKKGGFWRFGRLFRKKRERDNEFLEKNVGGVDEKSEIWD 625
                  L+KR+SS+   +   +K GFW  GRLF KKR +  +    +VGG++EKS++W 
Sbjct: 118 KGDELNFLVKRNSSSCVEIK--RKNGFWGIGRLFSKKRGKGCD--RSSVGGLEEKSDLWV 173

Query: 626 VENRGVSRSRSVCSFR--GCFDDYEGS-----SVISNGRPS---------------DLIS 739
           V+  GVSR RS+CSFR  G F   +G+     S IS  R S               D   
Sbjct: 174 VDYMGVSRCRSLCSFRGGGFFGSEDGTFSGARSSISAARSSISAARNSGVNGGLLFDPDR 233

Query: 740 KDGHGDSEKRSGGFN 784
           K G  ++E R  GF+
Sbjct: 234 KSGFSEAEPRKSGFD 248


>ref|XP_004135128.1| PREDICTED: uncharacterized protein LOC101207638 [Cucumis sativus]
           gi|449493476|ref|XP_004159307.1| PREDICTED:
           uncharacterized protein LOC101225146 [Cucumis sativus]
          Length = 389

 Score =  173 bits (438), Expect = 4e-41
 Identities = 108/242 (44%), Positives = 136/242 (56%), Gaps = 18/242 (7%)
 Frame = +2

Query: 116 MKDKGKAVAVXXXXXXXXXXXXXXXDLPCKKHPSSSSVGICAQCLKDRLIKLVCSDCGEQ 295
           M+++GKA+ V               + PCKKHPSSSSVGICA CLKDRLIKLVCSDCGEQ
Sbjct: 1   MRERGKALEVYSNDMDFYSSAS---EFPCKKHPSSSSVGICADCLKDRLIKLVCSDCGEQ 57

Query: 296 RLXXXXXXXXXXXXNPNSCVVDIGSVGRISFLLENDKEKNDVCHSHSSVKSRSEATGLLK 475
           RL              NSC V++GSVGR+SFL+EN++    +         + E   LL+
Sbjct: 58  RL--SSCSCSEISSKRNSCTVEVGSVGRVSFLIENERNGVSLLGPIKPKIEKREEVVLLE 115

Query: 476 RSSSTSTSVADVKKGGFWRFGRLFRKKRERDNEFLEKNVGGVDEKSEIWDVENRGVSRSR 655
           RSSS   S  ++KK GFWR G+ FRKKRE+  E    +V G DEKS+I  V+  GVSRSR
Sbjct: 116 RSSS---SCVEIKKSGFWRIGKFFRKKREKGCE--RSSVCGFDEKSDICMVDYMGVSRSR 170

Query: 656 SVCSFR--GCFDDYEGSS-VISNGRPS---------------DLISKDGHGDSEKRSGGF 781
           S+CSFR  G F   +G   V+S GR S               D   + G  ++E R  GF
Sbjct: 171 SLCSFRGNGFFGSEDGGDMVVSGGRSSISGARTSSVNGGLVCDSARRSGFSETEPRKSGF 230

Query: 782 NA 787
            +
Sbjct: 231 ES 232


Top