BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018870
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methylt...   391   e-106
emb|CBI40848.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methylt...   382   e-104
ref|XP_002532383.1| RNA binding protein, putative [Ricinus commu...   376   e-102
ref|XP_003628884.1| RNA methyltransferase-like protein [Medicago...   372   e-101

>ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA-like
            [Vitis vinifera]
          Length = 459

 Score =  391 bits (1005), Expect = e-106
 Identities = 204/324 (62%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
 Frame = -2

Query: 1315 FSAASHPHVSLLQQTRLSNLPTQRREEVDALPLPSNVRSITSPSNPFVKHCVKLRQSSSY 1136
            ++++ HP      Q+   N  T     V  LPLPS+V+SITSPSNPFVKHC KLR SSSY
Sbjct: 138  WASSVHPPGRFFTQSSHHNEDTSC--PVVTLPLPSHVKSITSPSNPFVKHCFKLRHSSSY 195

Query: 1135 RHSHASALVVGTTPIREITRFHDTVEERPCIFHCLLLLDGAEVPKGLGDXXXXXXXXXXX 956
            R+SH SALVVGTTPIREI +F  + +ER     CLL+LD AE+P+GL D           
Sbjct: 196  RYSHGSALVVGTTPIREIYKFQQSTQERTVEMDCLLILDKAEIPEGLDDFSVRLVRVSSM 255

Query: 955  XXRKLSGVQSTDSIEAVALLKIPNSFCNVDGNHREENFQSWFPFPNRILVLDGIQDPGNL 776
              +KLSG+QST+S+EA+AL++IP SF +V+ +  E++ + WF  P+RILVLD IQDPGNL
Sbjct: 256  VMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTYEKDCRRWFQSPHRILVLDRIQDPGNL 315

Query: 775  GTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASFQLPIVSGKWIHLETLRDGFQMK 596
            GTLLRSA+AFRW GVFLL GCCDPFN KALRASRGASFQLPIVSG WIHLETL++ FQMK
Sbjct: 316  GTLLRSAMAFRWGGVFLLSGCCDPFNGKALRASRGASFQLPIVSGSWIHLETLKNEFQMK 375

Query: 595  MLAGHPE----RKESFSLSQKLADSLVDKHVCLVLGSEGNGLSEQSEEACELISIPMAGG 428
            M+AGHP+    RK    LSQ LADSL D  +CLVLGSEG+GLSE+S + CEL+SIPMAG 
Sbjct: 376  MIAGHPDSNQKRKPVSPLSQGLADSLADVPLCLVLGSEGSGLSEKSWQLCELVSIPMAGE 435

Query: 427  YESLNVSVAGGIFLFMLQPKKRKL 356
            +ESLNVSVAGGIFL+MLQP+ R++
Sbjct: 436  FESLNVSVAGGIFLYMLQPQNRRV 459


>emb|CBI40848.3| unnamed protein product [Vitis vinifera]
          Length = 1306

 Score =  391 bits (1005), Expect = e-106
 Identities = 204/324 (62%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
 Frame = -2

Query: 1315 FSAASHPHVSLLQQTRLSNLPTQRREEVDALPLPSNVRSITSPSNPFVKHCVKLRQSSSY 1136
            ++++ HP      Q+   N  T     V  LPLPS+V+SITSPSNPFVKHC KLR SSSY
Sbjct: 976  WASSVHPPGRFFTQSSHHNEDTSC--PVVTLPLPSHVKSITSPSNPFVKHCFKLRHSSSY 1033

Query: 1135 RHSHASALVVGTTPIREITRFHDTVEERPCIFHCLLLLDGAEVPKGLGDXXXXXXXXXXX 956
            R+SH SALVVGTTPIREI +F  + +ER     CLL+LD AE+P+GL D           
Sbjct: 1034 RYSHGSALVVGTTPIREIYKFQQSTQERTVEMDCLLILDKAEIPEGLDDFSVRLVRVSSM 1093

Query: 955  XXRKLSGVQSTDSIEAVALLKIPNSFCNVDGNHREENFQSWFPFPNRILVLDGIQDPGNL 776
              +KLSG+QST+S+EA+AL++IP SF +V+ +  E++ + WF  P+RILVLD IQDPGNL
Sbjct: 1094 VMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTYEKDCRRWFQSPHRILVLDRIQDPGNL 1153

Query: 775  GTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASFQLPIVSGKWIHLETLRDGFQMK 596
            GTLLRSA+AFRW GVFLL GCCDPFN KALRASRGASFQLPIVSG WIHLETL++ FQMK
Sbjct: 1154 GTLLRSAMAFRWGGVFLLSGCCDPFNGKALRASRGASFQLPIVSGSWIHLETLKNEFQMK 1213

Query: 595  MLAGHPE----RKESFSLSQKLADSLVDKHVCLVLGSEGNGLSEQSEEACELISIPMAGG 428
            M+AGHP+    RK    LSQ LADSL D  +CLVLGSEG+GLSE+S + CEL+SIPMAG 
Sbjct: 1214 MIAGHPDSNQKRKPVSPLSQGLADSLADVPLCLVLGSEGSGLSEKSWQLCELVSIPMAGE 1273

Query: 427  YESLNVSVAGGIFLFMLQPKKRKL 356
            +ESLNVSVAGGIFL+MLQP+ R++
Sbjct: 1274 FESLNVSVAGGIFLYMLQPQNRRV 1297


>ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
            [Cucumis sativus]
          Length = 328

 Score =  382 bits (982), Expect = e-104
 Identities = 189/287 (65%), Positives = 230/287 (80%), Gaps = 3/287 (1%)
 Frame = -2

Query: 1225 LPLPSNVRSITSPSNPFVKHCVKLRQSSSYRHSHASALVVGTTPIREITRFHDTVEERPC 1046
            +PLPS+V++ITS SNPFVKHCVKLR SSSYRH H S +VVG TPIREI +F +++    C
Sbjct: 38   IPLPSHVKAITSISNPFVKHCVKLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGVTC 97

Query: 1045 IFHCLLLLDGAEVPKGLGDXXXXXXXXXXXXXRKLSGVQSTDSIEAVALLKIPNSFCNVD 866
               CLLLLD  EVP+GL +             +KLSG+QST+SI+A+AL++IP SFC+VD
Sbjct: 98   TLECLLLLDEVEVPEGLVNLTVRIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVD 157

Query: 865  GNHREENFQSWFPFPNRILVLDGIQDPGNLGTLLRSAVAFRWDGVFLLPGCCDPFNEKAL 686
            GN +E +F+ WFP P+RILVL+GIQDPGNLGTL+RSA+AF+W+G+FLLPGCCDPFNEKAL
Sbjct: 158  GNEKEVDFKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGIFLLPGCCDPFNEKAL 217

Query: 685  RASRGASFQLPIVSGKWIHLETLRDGFQMKMLAGHPERKES---FSLSQKLADSLVDKHV 515
            RASRGASFQLPIVSG W HLE  +  F+MKMLAGHPE  E      LSQ+ ++SL D  +
Sbjct: 218  RASRGASFQLPIVSGTWNHLEVFKKEFEMKMLAGHPESNEPKPVSVLSQQFSNSLKDFPL 277

Query: 514  CLVLGSEGNGLSEQSEEACELISIPMAGGYESLNVSVAGGIFLFMLQ 374
            CLVLG EG+GLSE+S + CEL+SIPMAGG+ESLNVSVAGGIFL+MLQ
Sbjct: 278  CLVLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 324


>ref|XP_002532383.1| RNA binding protein, putative [Ricinus communis]
            gi|223527907|gb|EEF29995.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 342

 Score =  376 bits (965), Expect = e-102
 Identities = 192/318 (60%), Positives = 238/318 (74%), Gaps = 12/318 (3%)
 Frame = -2

Query: 1270 RLSNLP---TQRREEVD-----ALPLPSNVRSITSPSNPFVKHCVKLRQSSSYRHSHASA 1115
            RLSN     TQR  ++D       PLP++++SITS SNPF+KHCVKLRQSS YRH+H SA
Sbjct: 25   RLSNTSPNQTQRNGDIDNSAEVRFPLPTHIKSITSTSNPFIKHCVKLRQSSPYRHAHGSA 84

Query: 1114 LVVGTTPIREITRFHDTVEERPCIFHCLLLLDGAEVPKGLGDXXXXXXXXXXXXXRKLSG 935
            LVVGTTPIREI +F  +++E      CL+L D A+VP+GL               ++LS 
Sbjct: 85   LVVGTTPIREICKFQKSLKEETVEMECLILPDKAKVPEGLDSSSTRTLRVSALVMKRLSQ 144

Query: 934  VQSTDSIEAVALLKIPNSFCNVDGNHREENFQSWFPFPNRILVLDGIQDPGNLGTLLRSA 755
            +QST+SIEA+AL+K P S+  V  + ++ +F+ WFP P+RILVL+GIQDPGNLGTL+RSA
Sbjct: 145  LQSTESIEAIALMKFPTSYFVVGDHQKDADFRKWFPSPHRILVLEGIQDPGNLGTLVRSA 204

Query: 754  VAFRWDGVFLLPGCCDPFNEKALRASRGASFQLPIVSGKWIHLETLRDGFQMKMLAGHP- 578
            VAFRW G+FLLPGCCDPFN+KAL+ASRGASFQ+PIVSG W HLE L+D FQMKMLAGHP 
Sbjct: 205  VAFRWGGIFLLPGCCDPFNDKALKASRGASFQVPIVSGSWHHLEALKDEFQMKMLAGHPA 264

Query: 577  ---ERKESFSLSQKLADSLVDKHVCLVLGSEGNGLSEQSEEACELISIPMAGGYESLNVS 407
               E+     LSQ  ADSL D  +CLVLG+EG GLSE+S + C+L+SIPMA  YESLNV+
Sbjct: 265  SDDEQTPVSELSQGFADSLADIPICLVLGNEGQGLSEKSLQECQLVSIPMARNYESLNVA 324

Query: 406  VAGGIFLFMLQPKKRKLI 353
            VAGGIFL+MLQPK + L+
Sbjct: 325  VAGGIFLYMLQPKHQGLL 342


>ref|XP_003628884.1| RNA methyltransferase-like protein [Medicago truncatula]
            gi|355522906|gb|AET03360.1| RNA methyltransferase-like
            protein [Medicago truncatula]
          Length = 638

 Score =  372 bits (956), Expect = e-101
 Identities = 194/309 (62%), Positives = 231/309 (74%), Gaps = 4/309 (1%)
 Frame = -2

Query: 1273 TRLSNLPTQRREEVDALPLPSNVRSITSPSNPFVKHCVKLRQSSSYRHSHASALVVGTTP 1094
            TRLS  P Q+ + +    +    + ITS SNPFVKHC+KLR +SSYR SH S LVVGTTP
Sbjct: 26   TRLSVTPPQQEQRISH-DVDEKSKLITSSSNPFVKHCLKLRNNSSYRRSHGSVLVVGTTP 84

Query: 1093 IREITRFHDTVEERPCIFHCLLLLDGAEVPKGLGDXXXXXXXXXXXXXRKLSGVQSTDSI 914
            IREI RF ++ + +     CL+L D AE+P GL +             RK+SG+QSTDSI
Sbjct: 85   IREIYRFQESSQNKNVTMDCLILPDKAEIPNGLDESADSIVHVSSTVMRKISGLQSTDSI 144

Query: 913  EAVALLKIPNSFCNVDGNHREENFQSWFPFPNRILVLDGIQDPGNLGTLLRSAVAFRWDG 734
            +A+AL+KIP SF N+D +  ++N Q WFP  +RILVLDGIQDPGNLGTLLRSAVAFRWDG
Sbjct: 145  DAIALMKIPASFSNLDDD--QKNCQKWFPSAHRILVLDGIQDPGNLGTLLRSAVAFRWDG 202

Query: 733  VFLLPGCCDPFNEKALRASRGASFQLPIVSGKWIHLETLRDGFQMKMLAGHPER----KE 566
            VFLLPGCCDPFNEKALRASRGASFQLPIVSG W HLE+L++  QMK+LAGHP+     K 
Sbjct: 203  VFLLPGCCDPFNEKALRASRGASFQLPIVSGSWNHLESLKEESQMKLLAGHPQHEGLIKP 262

Query: 565  SFSLSQKLADSLVDKHVCLVLGSEGNGLSEQSEEACELISIPMAGGYESLNVSVAGGIFL 386
             FSLSQ   DS++D  +CLVLGSEG+GLSE+S +ACEL+SI M G YESLNVSVAGGIFL
Sbjct: 263  VFSLSQSFCDSILDTPLCLVLGSEGSGLSEKSLQACELVSIAMTGEYESLNVSVAGGIFL 322

Query: 385  FMLQPKKRK 359
            +MLQ    K
Sbjct: 323  YMLQSNTNK 331