BLASTX nr result

ID: Cimicifuga21_contig00018865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018865
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632750.1| PREDICTED: probable FKBP-type peptidyl-proly...    82   4e-14
ref|XP_002264435.1| PREDICTED: probable FKBP-type peptidyl-proly...    82   4e-14
gb|AFK33664.1| unknown [Lotus japonicus]                               74   9e-12
ref|XP_003542563.1| PREDICTED: LOW QUALITY PROTEIN: probable FKB...    73   2e-11
ref|NP_001237515.1| uncharacterized protein LOC100305843 [Glycin...    72   6e-11

>ref|XP_003632750.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           1, chloroplastic isoform 2 [Vitis vinifera]
          Length = 215

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
 Frame = -3

Query: 216 KRPTNQSSLVVPCRCXXXXXXXXXXXXS-----EGRRALMGCFLAAAAGIYVCDVAGAVS 52
           KR   ++S V+ C+C            +     EGRRALMGC L AAAGIYVCDVAGAVS
Sbjct: 28  KRSFKRNSSVLFCQCSFSSSDDSAKPATLSLQREGRRALMGCVLVAAAGIYVCDVAGAVS 87

Query: 51  SSRRALRGAKIPESEFT 1
           +SRRALRGAKIPES++T
Sbjct: 88  TSRRALRGAKIPESDYT 104


>ref|XP_002264435.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           1, chloroplastic isoform 1 [Vitis vinifera]
           gi|297740022|emb|CBI30204.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
 Frame = -3

Query: 216 KRPTNQSSLVVPCRCXXXXXXXXXXXXS-----EGRRALMGCFLAAAAGIYVCDVAGAVS 52
           KR   ++S V+ C+C            +     EGRRALMGC L AAAGIYVCDVAGAVS
Sbjct: 28  KRSFKRNSSVLFCQCSFSSSDDSAKPATLSLQREGRRALMGCVLVAAAGIYVCDVAGAVS 87

Query: 51  SSRRALRGAKIPESEFT 1
           +SRRALRGAKIPES++T
Sbjct: 88  TSRRALRGAKIPESDYT 104


>gb|AFK33664.1| unknown [Lotus japonicus]
          Length = 229

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
 Frame = -3

Query: 213 RPTNQSSLVVPCRCXXXXXXXXXXXXS------EGRRALMGCFLAAAAGIYVCDVAGAVS 52
           R  N++S  +PCRC                   EGRR L+ C +   AG++ CDVAGAVS
Sbjct: 24  RTHNKTSYRLPCRCSCSSSNKTAAEPVTESLQIEGRRELLSCLITTVAGVFACDVAGAVS 83

Query: 51  SSRRALRGAKIPESEFT 1
           +SRRALRGAKIPES+FT
Sbjct: 84  TSRRALRGAKIPESDFT 100


>ref|XP_003542563.1| PREDICTED: LOW QUALITY PROTEIN: probable FKBP-type peptidyl-prolyl
           cis-trans isomerase 1, chloroplastic-like [Glycine max]
          Length = 233

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -3

Query: 132 EGRRALMGCFLAAAAGIYVCDVAGAVSSSRRALRGAKIPESEFT 1
           EGRRAL+ C L   AG+Y CDVAGAVS+SRRALRGAKIPES++T
Sbjct: 61  EGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYT 104


>ref|NP_001237515.1| uncharacterized protein LOC100305843 [Glycine max]
           gi|255626751|gb|ACU13720.1| unknown [Glycine max]
          Length = 237

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = -3

Query: 132 EGRRALMGCFLAAAAGIYVCDVAGAVSSSRRALRGAKIPESEFT 1
           EGRRAL+ C L    G+Y CDVAGAVS+SRRALRGAKIPES++T
Sbjct: 61  EGRRALLSCLLTTVVGVYACDVAGAVSTSRRALRGAKIPESDYT 104


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