BLASTX nr result

ID: Cimicifuga21_contig00018861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018861
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281096.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vit...   110   1e-22
ref|XP_002274805.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vit...   108   3e-22
ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransfera...   102   3e-20
ref|XP_002302400.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002511694.1| conserved hypothetical protein [Ricinus comm...    98   8e-19

>ref|XP_002281096.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vitis vinifera]
           gi|296089204|emb|CBI38907.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  110 bits (275), Expect = 1e-22
 Identities = 67/140 (47%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
 Frame = -2

Query: 419 MWA-FANNGLRILRSCVSLSIPIXXXXXXXXXXXTKFGVLASMDKLVNDFSSIAIXXXXX 243
           MWA    NG+R LR C  + +P            T+FG L SM+   N+ +  +      
Sbjct: 1   MWASVTGNGIRFLRYCY-VCLPPVTPTPSSLSLLTRFGALVSME---NNSAKSSSFSAFA 56

Query: 242 XXXXXXXXXXXXXGLETRDDWQSSGGGRGGNSKDKIDALGRLLTRILRHMASELSLNMRS 63
                          + R+  +  GGG GG+ KDKIDALGRLLTRILRHMASEL+LNMRS
Sbjct: 57  HSSRSGGRGRGGTMRDDRERSRGRGGGGGGSGKDKIDALGRLLTRILRHMASELNLNMRS 116

Query: 62  DGYVRVSDLLKLNLKTFANI 3
           DGY+RV DLLKLN+KTFANI
Sbjct: 117 DGYIRVEDLLKLNMKTFANI 136


>ref|XP_002274805.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vitis vinifera]
           gi|296089203|emb|CBI38906.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  108 bits (271), Expect = 3e-22
 Identities = 72/146 (49%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 MWA-FANNGLRILRSCVSLSIPIXXXXXXXXXXXT--KFGVLASMDKLVNDFSSIAIXXX 249
           MWA    NG+RILR C     P+              +FGVL SM+      SS +    
Sbjct: 1   MWASVTGNGIRILRYCYVCLPPVTPTPSSLSGLSLLTRFGVLVSMENNSAKSSSFSAFAH 60

Query: 248 XXXXXXXXXXXXXXXGLETRDDWQSS----GGGRGGNSKDKIDALGRLLTRILRHMASEL 81
                              RDD + S    GGG G + KDKIDALGRLLTRILRHMASEL
Sbjct: 61  SSRSGGRGRGGTM------RDDRERSRGRGGGGGGSSGKDKIDALGRLLTRILRHMASEL 114

Query: 80  SLNMRSDGYVRVSDLLKLNLKTFANI 3
           +LNMRSDGYVRV DLLKLN+KTFANI
Sbjct: 115 NLNMRSDGYVRVQDLLKLNMKTFANI 140


>ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus] gi|449529309|ref|XP_004171642.1| PREDICTED:
           putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus]
          Length = 254

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/63 (79%), Positives = 56/63 (88%)
 Frame = -2

Query: 191 RDDWQSSGGGRGGNSKDKIDALGRLLTRILRHMASELSLNMRSDGYVRVSDLLKLNLKTF 12
           R+  +  GGG GG+ KDKIDALGRLLTR+LRHMASEL+LNMRSDGYV+V DLLKLNLKTF
Sbjct: 31  RERTRGRGGGGGGSGKDKIDALGRLLTRVLRHMASELNLNMRSDGYVKVEDLLKLNLKTF 90

Query: 11  ANI 3
           ANI
Sbjct: 91  ANI 93


>ref|XP_002302400.1| predicted protein [Populus trichocarpa] gi|222844126|gb|EEE81673.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = -2

Query: 191 RDDWQSSGGGRGGNSKDKIDALGRLLTRILRHMASELSLNMRSDGYVRVSDLLKLNLKTF 12
           R+  +  G GRGG+SKDKIDALGRLLTRILRH ASEL+LNMRSDG+V+V DLLKLN+KTF
Sbjct: 5   REGSRGRGRGRGGSSKDKIDALGRLLTRILRHKASELNLNMRSDGFVKVEDLLKLNMKTF 64

Query: 11  ANI 3
           AN+
Sbjct: 65  ANV 67


>ref|XP_002511694.1| conserved hypothetical protein [Ricinus communis]
           gi|223548874|gb|EEF50363.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 554

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/59 (81%), Positives = 54/59 (91%)
 Frame = -2

Query: 179 QSSGGGRGGNSKDKIDALGRLLTRILRHMASELSLNMRSDGYVRVSDLLKLNLKTFANI 3
           +S G G GG +KDKIDALGRLLTRILRHMASEL+LNMRSDG+VRV DLLKLN+KTFA+I
Sbjct: 15  RSGGDGGGGGAKDKIDALGRLLTRILRHMASELNLNMRSDGFVRVQDLLKLNMKTFASI 73


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