BLASTX nr result

ID: Cimicifuga21_contig00018833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018833
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22432.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002265247.1| PREDICTED: uncharacterized protein LOC100242...    67   2e-09
emb|CAN66220.1| hypothetical protein VITISV_024779 [Vitis vinifera]    67   2e-09
ref|XP_002304380.1| predicted protein [Populus trichocarpa] gi|1...    65   4e-09
ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    65   8e-09

>emb|CBI22432.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -3

Query: 150 PVDFRFRIECFSWLSTCSMDRFESCEFDAGGYKWKLALYPNGNKKMNGE 4
           P D+ FR+EC S L   +++++ES +F+AGGYKW+L LYPNGN K NG+
Sbjct: 25  PSDYLFRVECVSSLMNTNIEKYESGKFEAGGYKWRLCLYPNGNIKSNGK 73


>ref|XP_002265247.1| PREDICTED: uncharacterized protein LOC100242863 [Vitis vinifera]
          Length = 364

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -3

Query: 150 PVDFRFRIECFSWLSTCSMDRFESCEFDAGGYKWKLALYPNGNKKMNGE 4
           P D+ FR+EC S L   +++++ES +F+AGGYKW+L LYPNGN K NG+
Sbjct: 46  PSDYLFRVECVSSLMNTNIEKYESGKFEAGGYKWRLCLYPNGNIKSNGK 94


>emb|CAN66220.1| hypothetical protein VITISV_024779 [Vitis vinifera]
          Length = 341

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = -3

Query: 150 PVDFRFRIECFSWLSTCSMDRFESCEFDAGGYKWKLALYPNGNKKMNGE 4
           P D+ FR+EC S L   +++++ES +F+AGGYKW+L LYPNGN K NG+
Sbjct: 46  PSDYLFRVECVSSLMNTNIEKYESGKFEAGGYKWRLCLYPNGNIKSNGK 94


>ref|XP_002304380.1| predicted protein [Populus trichocarpa] gi|118485977|gb|ABK94833.1|
           unknown [Populus trichocarpa]
           gi|222841812|gb|EEE79359.1| predicted protein [Populus
           trichocarpa]
          Length = 321

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
 Frame = -3

Query: 183 RHNMAGLCKSS----PVDFRFRIECFSWLSTCSMDRFESCEFDAGGYKWKLALYPNGNKK 16
           R ++A + +S+    P  + F+IE FS L+   +D FES +F+ G YKW+L LYPNGNKK
Sbjct: 14  RDDLAEITRSTRDLPPAHYTFKIENFSLLANAKIDNFESGDFEVGSYKWRLRLYPNGNKK 73

Query: 15  MNGE 4
            NG+
Sbjct: 74  NNGD 77


>ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355510910|gb|AES92052.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 311

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = -3

Query: 165 LCKSSPVDFRFRIECFSWLSTCSMDRFESCEFDAGGYKWKLALYPNGNKKMNGED 1
           + ++SPV +  +I+ FS L+T S++R+ES  F+AGG+KWKL LYP+GNK  N +D
Sbjct: 12  IVEASPVHYIMKIQSFSLLTTNSIERYESGRFEAGGHKWKLVLYPSGNKSKNVKD 66


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