BLASTX nr result

ID: Cimicifuga21_contig00018830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018830
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-li...   537   e-150
gb|ABK22482.1| unknown [Picea sitchensis]                             520   e-145
ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-li...   510   e-142
ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Popu...   503   e-140
ref|XP_003609656.1| WD repeat-containing protein [Medicago trunc...   502   e-140

>ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-like [Vitis vinifera]
           gi|297735857|emb|CBI18611.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  537 bits (1384), Expect = e-150
 Identities = 254/313 (81%), Positives = 287/313 (91%), Gaps = 1/313 (0%)
 Frame = -3

Query: 951 MASKSTKALNPYKLKETLTGHKRAISSVKFSSDGTLLGSSSADKTIRLWSPT-DGTPLQD 775
           MAS  ++ + PYKLK+TLT HKRA+S+VKFSSDG LLGSSSADKT+R WS + D + LQ+
Sbjct: 1   MASDPSEFITPYKLKQTLTAHKRAVSAVKFSSDGLLLGSSSADKTLRTWSTSGDFSTLQE 60

Query: 774 FRGHDFGVSDFAFSSDSRYICSASDDKTVRIWDVETSALVKTLHGHTNYVFCVNYNPQSN 595
           F GHD G+SD AFSSDSR++CSASDDKTVR+WDVET +L+KTL GHTN+VFCVN+NPQSN
Sbjct: 61  FHGHDQGISDLAFSSDSRHVCSASDDKTVRLWDVETGSLIKTLQGHTNHVFCVNFNPQSN 120

Query: 594 MIVSGSFDETVRVWDVKTGKCLRVLPAHSDPVTAVHFNRDGSSIVSSSYDGLCRIWDAAT 415
           MIVSGSFDETVRVWDVKTGKCL+VLPAHSDPVTA +FNRDGS IVSSSYDGLCRIWDA+T
Sbjct: 121 MIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSYDGLCRIWDAST 180

Query: 414 GHCTKTLIDDENPPVSFVKFSPNGKYILASTLDDTMRLWDFSTGKFLKTYTGHVNSKYCI 235
           GHC KTLIDDENPPVSFVKFSPNGK+IL  TLD+T+RLW+FSTGKFLKTYTGHVNSKYCI
Sbjct: 181 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCI 240

Query: 234 SSTFSVTNGKYIVSGSEDHLVYLWDLQKKEVVQTLEGHTDTVISVACHPSENMIASGALD 55
           SSTFSVTNGKYIV GSED+ VYLW+LQ +++VQ LEGHTDTVISV+CHPS+NMIASGAL 
Sbjct: 241 SSTFSVTNGKYIVGGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPSQNMIASGALG 300

Query: 54  NDKTVKIWTQERD 16
           +DKTVKIWTQERD
Sbjct: 301 SDKTVKIWTQERD 313


>gb|ABK22482.1| unknown [Picea sitchensis]
          Length = 314

 Score =  520 bits (1339), Expect = e-145
 Identities = 242/309 (78%), Positives = 276/309 (89%)
 Frame = -3

Query: 948 ASKSTKALNPYKLKETLTGHKRAISSVKFSSDGTLLGSSSADKTIRLWSPTDGTPLQDFR 769
           A  S  +  PYKLK  LTGHKRA+SSVKFS+DG LLGS+SADK++R+WS  DG+  ++ +
Sbjct: 5   AQGSGNSFKPYKLKHILTGHKRAVSSVKFSADGKLLGSASADKSVRIWSAGDGSAKRELQ 64

Query: 768 GHDFGVSDFAFSSDSRYICSASDDKTVRIWDVETSALVKTLHGHTNYVFCVNYNPQSNMI 589
           GH  GVSD A+SSDS Y+CSASDDKT+RIWDV T   +KTL GHTNYVFCVN+NPQSN+I
Sbjct: 65  GHAEGVSDMAWSSDSHYVCSASDDKTLRIWDVHTGDCIKTLKGHTNYVFCVNFNPQSNLI 124

Query: 588 VSGSFDETVRVWDVKTGKCLRVLPAHSDPVTAVHFNRDGSSIVSSSYDGLCRIWDAATGH 409
           VSGSFDETVR+WDV+TGKCL+VLPAHSDPVTAVHFNRDGS IVSSSYDGLCRIWD+ATGH
Sbjct: 125 VSGSFDETVRIWDVRTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDSATGH 184

Query: 408 CTKTLIDDENPPVSFVKFSPNGKYILASTLDDTMRLWDFSTGKFLKTYTGHVNSKYCISS 229
           C KTLIDDENPPVSFV FSPNGK+ILA TLD+T+RLW+F+TGKFLKTYTGHVNSKYCISS
Sbjct: 185 CLKTLIDDENPPVSFVNFSPNGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKYCISS 244

Query: 228 TFSVTNGKYIVSGSEDHLVYLWDLQKKEVVQTLEGHTDTVISVACHPSENMIASGALDND 49
           TFSVTNGKYIVSGSED+ VYLWDLQ + +VQ LEGHTDTVISV+CHP+EN IASGAL+ND
Sbjct: 245 TFSVTNGKYIVSGSEDNCVYLWDLQARNIVQKLEGHTDTVISVSCHPTENKIASGALEND 304

Query: 48  KTVKIWTQE 22
           KT++IW QE
Sbjct: 305 KTLRIWVQE 313


>ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
           gi|449531922|ref|XP_004172934.1| PREDICTED: WD
           repeat-containing protein 5-like [Cucumis sativus]
          Length = 318

 Score =  510 bits (1313), Expect = e-142
 Identities = 240/307 (78%), Positives = 277/307 (90%), Gaps = 2/307 (0%)
 Frame = -3

Query: 936 TKALNPYKLKETLTGHKRAISSVKFSSDGTLLGSSSADKTIRLWSPTDGT--PLQDFRGH 763
           T +  PY L +TLT HKR ISSVKFS+DG LLGSSSADKT+R +S ++ T  P+Q+F+GH
Sbjct: 8   TDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTVTPVQEFQGH 67

Query: 762 DFGVSDFAFSSDSRYICSASDDKTVRIWDVETSALVKTLHGHTNYVFCVNYNPQSNMIVS 583
           + GVSD AFSSDSR++ SASDDKT+R+WDV T +LVKTL+GHTNYVFCVN+NPQSNMIVS
Sbjct: 68  EQGVSDLAFSSDSRFLVSASDDKTLRLWDVSTGSLVKTLNGHTNYVFCVNFNPQSNMIVS 127

Query: 582 GSFDETVRVWDVKTGKCLRVLPAHSDPVTAVHFNRDGSSIVSSSYDGLCRIWDAATGHCT 403
           GSFDETVR+WDVK+GKCL+VLPAHSDPVT V FNRDGS IVSSSYDGLCRIWDA+TGHC 
Sbjct: 128 GSFDETVRIWDVKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDASTGHCV 187

Query: 402 KTLIDDENPPVSFVKFSPNGKYILASTLDDTMRLWDFSTGKFLKTYTGHVNSKYCISSTF 223
           KTLIDDENPPVSFVKFSPNGK+IL  TLD+T+RLW+FSTGKFLKTYTGH NSK+CISSTF
Sbjct: 188 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKFCISSTF 247

Query: 222 SVTNGKYIVSGSEDHLVYLWDLQKKEVVQTLEGHTDTVISVACHPSENMIASGALDNDKT 43
           SVTNG+YI SGSED+ VYLW+LQ +++VQ LEGH+DTVISV+CHPSENMIASGA+ NDKT
Sbjct: 248 SVTNGRYIASGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKT 307

Query: 42  VKIWTQE 22
           VKIWTQ+
Sbjct: 308 VKIWTQK 314


>ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Populus trichocarpa]
           gi|222856761|gb|EEE94308.1| hypothetical protein
           POPTRDRAFT_760587 [Populus trichocarpa]
          Length = 317

 Score =  503 bits (1295), Expect = e-140
 Identities = 243/315 (77%), Positives = 272/315 (86%), Gaps = 7/315 (2%)
 Frame = -3

Query: 945 SKSTKALNPYKLKETLTGHKRAISSVKFSSDGTLLGSSSADKTIRLWS------PTDG-T 787
           S  T++  PY L +TLTGHK  ISSVKFS+DG LLGSSSADKT+R +S      PT   T
Sbjct: 2   SAPTESYKPYTLTQTLTGHKSPISSVKFSADGRLLGSSSADKTLRTYSISLSNPPTSPIT 61

Query: 786 PLQDFRGHDFGVSDFAFSSDSRYICSASDDKTVRIWDVETSALVKTLHGHTNYVFCVNYN 607
            L DF GH+ GVSD AFSSDSR+I SASDDKT+R+WDV T   +KTLHGHTNYVFCVN+N
Sbjct: 62  HLHDFHGHEQGVSDLAFSSDSRFIVSASDDKTLRLWDVTTGHTIKTLHGHTNYVFCVNFN 121

Query: 606 PQSNMIVSGSFDETVRVWDVKTGKCLRVLPAHSDPVTAVHFNRDGSSIVSSSYDGLCRIW 427
           PQSNMIVSGSFDETVR+WDVK+GKCL+VLPAHSDPVTAV FNR+GS IVSSSYDGLCRIW
Sbjct: 122 PQSNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTAVDFNREGSLIVSSSYDGLCRIW 181

Query: 426 DAATGHCTKTLIDDENPPVSFVKFSPNGKYILASTLDDTMRLWDFSTGKFLKTYTGHVNS 247
           DA TGHC KTLIDDENPPVSFVKFSPNGK+IL  TLD+ +RLW+FSTGKFLKTYTGHVN+
Sbjct: 182 DAGTGHCIKTLIDDENPPVSFVKFSPNGKFILVGTLDNNLRLWNFSTGKFLKTYTGHVNT 241

Query: 246 KYCISSTFSVTNGKYIVSGSEDHLVYLWDLQKKEVVQTLEGHTDTVISVACHPSENMIAS 67
           K+CIS TFSVTNGKYIV GSED  VYLW+LQ +++VQ LEGHTDTVISVACHP++N+IAS
Sbjct: 242 KFCISPTFSVTNGKYIVGGSEDSCVYLWELQSRKIVQKLEGHTDTVISVACHPTQNIIAS 301

Query: 66  GALDNDKTVKIWTQE 22
           GAL NDKTVKIWTQE
Sbjct: 302 GALGNDKTVKIWTQE 316


>ref|XP_003609656.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510711|gb|AES91853.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 326

 Score =  502 bits (1293), Expect = e-140
 Identities = 238/325 (73%), Positives = 278/325 (85%), Gaps = 9/325 (2%)
 Frame = -3

Query: 963 TFTPMASKSTKALNPYKLKETLTGHKRAISSVKFSSDGTLLGSSSADKTIRLWSPTDG-- 790
           T  PM   S+    PY L +TLTGHKRAIS+VKFSS+G LL SSSADKT+R +  T+   
Sbjct: 3   TEEPMDCDSSN-YKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNSDS 61

Query: 789 -------TPLQDFRGHDFGVSDFAFSSDSRYICSASDDKTVRIWDVETSALVKTLHGHTN 631
                  +P+Q + GH  GVSD AFSSDSRY+ SASDDKT+R+WDV T +LVKTLHGHTN
Sbjct: 62  DSNSLTLSPMQQYEGHQHGVSDLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTN 121

Query: 630 YVFCVNYNPQSNMIVSGSFDETVRVWDVKTGKCLRVLPAHSDPVTAVHFNRDGSSIVSSS 451
           YVFCVN+NPQSN+IVSGSFDETVRVWDVK+GKCL+VLPAHSDPVTAV FNRDG+ IVSSS
Sbjct: 122 YVFCVNFNPQSNVIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSS 181

Query: 450 YDGLCRIWDAATGHCTKTLIDDENPPVSFVKFSPNGKYILASTLDDTMRLWDFSTGKFLK 271
           YDGLCRIWDA+TGHC KTLIDDENPPVS+VKFSPN K+IL  TLD+ +RLW++STGKFLK
Sbjct: 182 YDGLCRIWDASTGHCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRLWNYSTGKFLK 241

Query: 270 TYTGHVNSKYCISSTFSVTNGKYIVSGSEDHLVYLWDLQKKEVVQTLEGHTDTVISVACH 91
           TYTGHVNSKYCISS+FS+TNGKY+V GSED+ +YLW LQ +++VQ LEGHTD+V+SV+CH
Sbjct: 242 TYTGHVNSKYCISSSFSITNGKYVVGGSEDNCIYLWGLQSRKIVQKLEGHTDSVVSVSCH 301

Query: 90  PSENMIASGALDNDKTVKIWTQERD 16
           P+ENMIASGAL NDKTVKIWTQ++D
Sbjct: 302 PTENMIASGALGNDKTVKIWTQQKD 326


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