BLASTX nr result

ID: Cimicifuga21_contig00018824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018824
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]              110   3e-31
ref|XP_002315662.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-31
emb|CAN81865.1| hypothetical protein VITISV_010592 [Vitis vinifera]   108   5e-28
ref|XP_002530040.1| ATP binding protein, putative [Ricinus commu...   105   2e-27
ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249...   106   2e-27

>gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]
          Length = 771

 Score =  110 bits (274), Expect(2) = 3e-31
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = +1

Query: 214 RPCSVSDVLADLVGAARPLAHKLQRTVELNEVSQYLQVFVEESAVRQALSNLIEGALLRT 393
           RPC+VS+VL+DLV AA PLA+K QR +EL E+SQ LQV +EE A+RQALSNLIEGALLRT
Sbjct: 597 RPCNVSEVLSDLVEAAIPLANKQQRILELGELSQSLQVAIEEPALRQALSNLIEGALLRT 656

Query: 394 HVGGKVEIVSTEAPA 438
           HVGGKVEIVST APA
Sbjct: 657 HVGGKVEIVSTGAPA 671



 Score = 50.1 bits (118), Expect(2) = 3e-31
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
 Frame = +3

Query: 3   ANIVRYNEETLRKMKHSTHFHPDIGSSQL-FDNISDGSD----ADKTKHLHPATKDXXXX 167
           ANIVRYNEETL K+ +S + HP+   SQL  D ++D SD      K + L+PA+KD    
Sbjct: 523 ANIVRYNEETLMKIHNSAYAHPESMRSQLPEDFLNDSSDKLQTPGKPRFLNPASKDMEMP 582

Query: 168 XXXXXXXXXQQHKI 209
                    QQH I
Sbjct: 583 MPPLALSPLQQHGI 596


>ref|XP_002315662.1| predicted protein [Populus trichocarpa] gi|222864702|gb|EEF01833.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  110 bits (274), Expect(2) = 3e-31
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = +1

Query: 214 RPCSVSDVLADLVGAARPLAHKLQRTVELNEVSQYLQVFVEESAVRQALSNLIEGALLRT 393
           RPC+VS+VL+DLV AA PLA+K QR +EL E+SQ LQV +EE A+RQALSNLIEGALLRT
Sbjct: 299 RPCNVSEVLSDLVEAAIPLANKQQRILELGELSQSLQVAIEEPALRQALSNLIEGALLRT 358

Query: 394 HVGGKVEIVSTEAPA 438
           HVGGKVEIVST APA
Sbjct: 359 HVGGKVEIVSTGAPA 373



 Score = 50.1 bits (118), Expect(2) = 3e-31
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
 Frame = +3

Query: 3   ANIVRYNEETLRKMKHSTHFHPDIGSSQL-FDNISDGSD----ADKTKHLHPATKDXXXX 167
           ANIVRYNEETL K+ +S + HP+   SQL  D ++D SD      K + L+PA+KD    
Sbjct: 225 ANIVRYNEETLMKIHNSAYAHPESMRSQLPEDFLNDSSDKLQTPGKPRFLNPASKDMEMP 284

Query: 168 XXXXXXXXXQQHKI 209
                    QQH I
Sbjct: 285 MPPLALSPLQQHGI 298


>emb|CAN81865.1| hypothetical protein VITISV_010592 [Vitis vinifera]
          Length = 608

 Score =  108 bits (269), Expect(2) = 5e-28
 Identities = 58/77 (75%), Positives = 63/77 (81%)
 Frame = +1

Query: 208 SARPCSVSDVLADLVGAARPLAHKLQRTVELNEVSQYLQVFVEESAVRQALSNLIEGALL 387
           S RPC+V D+LADLVGA +PLAHK QR VEL   SQ LQV VEE A+RQALSNLIEGALL
Sbjct: 435 SGRPCNVYDILADLVGAVKPLAHKQQREVELIGRSQTLQVAVEEPALRQALSNLIEGALL 494

Query: 388 RTHVGGKVEIVSTEAPA 438
           RT VGGKVEI+ST  PA
Sbjct: 495 RTRVGGKVEILSTGTPA 511



 Score = 41.2 bits (95), Expect(2) = 5e-28
 Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
 Frame = +3

Query: 3   ANIVRYNEETLRKMKHSTHFHPDIGSSQLFDNI------SDGSDADKTKHLHPATKDXXX 164
           ANIVRYNEETL+KM  ST+ H D   +QL DN       S   ++ +   L  A  D   
Sbjct: 351 ANIVRYNEETLKKMYKSTYAHAD-SVNQLSDNFWRETSSSKAEESGEPLSLTSAANDLDM 409

Query: 165 XXXXXXXXXXQQHKISQTM 221
                      QH IS  +
Sbjct: 410 PTPPLALARVSQHGISSLL 428


>ref|XP_002530040.1| ATP binding protein, putative [Ricinus communis]
           gi|223530456|gb|EEF32340.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 710

 Score =  105 bits (262), Expect(2) = 2e-27
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +1

Query: 214 RPCSVSDVLADLVGAARPLAHKLQRTVELNEVSQYLQVFVEESAVRQALSNLIEGALLRT 393
           RPC+V +VL+DLVGA +PL  K QR + L+E+SQ LQV +EE A+RQALSNLIEGALLRT
Sbjct: 535 RPCNVYEVLSDLVGAVQPLTFKQQRNIVLSELSQSLQVAIEEQALRQALSNLIEGALLRT 594

Query: 394 HVGGKVEIVSTEAPA 438
            VGGKVEIV TEAPA
Sbjct: 595 RVGGKVEIVCTEAPA 609



 Score = 41.6 bits (96), Expect(2) = 2e-27
 Identities = 22/50 (44%), Positives = 32/50 (64%)
 Frame = +3

Query: 3   ANIVRYNEETLRKMKHSTHFHPDIGSSQLFDNISDGSDADKTKHLHPATK 152
           ANI+RYNEE L+++ +S + H +   S L DNI    DAD + +LH + K
Sbjct: 459 ANIMRYNEEALQRIHNSNYHHHESLGSHLSDNIP--RDADDSNNLHNSGK 506


>ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249068 [Vitis vinifera]
           gi|296081359|emb|CBI16792.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score =  106 bits (265), Expect(2) = 2e-27
 Identities = 57/75 (76%), Positives = 62/75 (82%)
 Frame = +1

Query: 214 RPCSVSDVLADLVGAARPLAHKLQRTVELNEVSQYLQVFVEESAVRQALSNLIEGALLRT 393
           RPC+V D+LADLVGA +PLAHK QR VEL   SQ LQV VEE A+RQALSNLIEGALLRT
Sbjct: 456 RPCNVYDILADLVGAVKPLAHKQQREVELIGRSQTLQVAVEEPALRQALSNLIEGALLRT 515

Query: 394 HVGGKVEIVSTEAPA 438
            VGGKVEI+ST  PA
Sbjct: 516 RVGGKVEILSTGTPA 530



 Score = 40.4 bits (93), Expect(2) = 2e-27
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = +3

Query: 3   ANIVRYNEETLRKMKHSTHFHPDIGSSQLFDNISDGSDADKTK 131
           ANIVRYNEETL+KM  ST+ H D   +QL DN    + + K +
Sbjct: 382 ANIVRYNEETLKKMYKSTYAHAD-SVNQLSDNFWRETSSSKAE 423


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