BLASTX nr result

ID: Cimicifuga21_contig00018811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018811
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299072.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002330578.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002864435.1| hypothetical protein ARALYDRAFT_495698 [Arab...   145   3e-33
ref|XP_002532941.1| conserved hypothetical protein [Ricinus comm...   145   3e-33
ref|NP_200423.2| uncharacterized protein [Arabidopsis thaliana] ...   141   5e-32

>ref|XP_002299072.1| predicted protein [Populus trichocarpa] gi|222846330|gb|EEE83877.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 8/132 (6%)
 Frame = +3

Query: 78  MAQL-DHHVVEIPVLNEDQQHQQKALVA------IQNHPLMEISQSPGHLLLLKLWQREE 236
           MAQ+ D H+VEIPV   D++HQQK + A      IQNHPL EIS SPGHLLLLKLWQREE
Sbjct: 1   MAQMKDAHIVEIPV---DEEHQQKLICAMNTIKAIQNHPLAEISNSPGHLLLLKLWQREE 57

Query: 237 NLYNRRISIKETRIDRTRSEIFQLCCFFFAFYGLLLTFLYTSSIRG-TNSCRNWWIPSSL 413
           +L+ RRI++KE+R+D  + EIFQLCCFF  F+G  LT L+TSS+    +SC+NWWIPS +
Sbjct: 58  DLFGRRIALKESRMDSIKREIFQLCCFFLVFHGFFLTILFTSSVDSKEHSCKNWWIPSLV 117

Query: 414 SLFTSIVMIFLV 449
           S+ TS+V +FLV
Sbjct: 118 SVCTSLVFVFLV 129


>ref|XP_002330578.1| predicted protein [Populus trichocarpa] gi|222872136|gb|EEF09267.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/132 (56%), Positives = 98/132 (74%), Gaps = 8/132 (6%)
 Frame = +3

Query: 78  MAQL-DHHVVEIPVLNEDQQHQQK------ALVAIQNHPLMEISQSPGHLLLLKLWQREE 236
           MA++ D H+VEIPV   D++HQQK       + AIQNHPL EIS  PGHLLLLKLWQREE
Sbjct: 1   MAEMKDAHIVEIPV---DEEHQQKLICAMNTITAIQNHPLAEISNCPGHLLLLKLWQREE 57

Query: 237 NLYNRRISIKETRIDRTRSEIFQLCCFFFAFYGLLLTFLYTSSIRG-TNSCRNWWIPSSL 413
           NL+ RRI++KE+R+   + EIF LCCFF  F+G+ LT L+TSS+    ++C+NWWIPS +
Sbjct: 58  NLFGRRIALKESRMVSIKREIFHLCCFFLVFHGIFLTILFTSSVDSKEHTCKNWWIPSLV 117

Query: 414 SLFTSIVMIFLV 449
           S+ TS+V + LV
Sbjct: 118 SVCTSLVFVSLV 129


>ref|XP_002864435.1| hypothetical protein ARALYDRAFT_495698 [Arabidopsis lyrata subsp.
           lyrata] gi|297310270|gb|EFH40694.1| hypothetical protein
           ARALYDRAFT_495698 [Arabidopsis lyrata subsp. lyrata]
          Length = 235

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/138 (51%), Positives = 95/138 (68%), Gaps = 18/138 (13%)
 Frame = +3

Query: 90  DHHVVEIPVLNEDQQHQQKALVAIQN-----------HPLMEISQSPGHLLLLKLWQREE 236
           D HVVEIPV  E ++ QQ+ LVA+ N           HPL EIS+SPGHLLLLKLWQREE
Sbjct: 6   DSHVVEIPVDEEHKERQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLLLKLWQREE 65

Query: 237 NLYNRRISIKETRIDRTRSEIFQLCCFFFAFYGLLLTFLYTSS-------IRGTNSCRNW 395
           +L+ RR+ +KE+R++  + EIFQLCCFF  F+G   T +Y+SS       ++    C+ W
Sbjct: 66  DLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDDEVVKSNAVCKKW 125

Query: 396 WIPSSLSLFTSIVMIFLV 449
           WIPS++SL TS+V++FLV
Sbjct: 126 WIPSAVSLATSLVLVFLV 143


>ref|XP_002532941.1| conserved hypothetical protein [Ricinus communis]
           gi|223527292|gb|EEF29445.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/130 (56%), Positives = 98/130 (75%), Gaps = 7/130 (5%)
 Frame = +3

Query: 78  MAQL-DHHVVEIPVLNEDQQHQQKAL----VAIQNHPLMEISQSPGHLLLLKLWQREENL 242
           MA++ D H+VEIPV   +++HQ+K L     A+QNHPL EIS SPGHLLLLKLWQREE+L
Sbjct: 1   MAEMKDAHIVEIPV---NEEHQEKQLCVMTAALQNHPLTEISSSPGHLLLLKLWQREEDL 57

Query: 243 YNRRISIKETRIDRTRSEIFQLCCFFFAFYGLLLTFLYTSSI--RGTNSCRNWWIPSSLS 416
           +NR+I +KETR+D  + EIFQLC FF  F+G+ LT L+TSS   +  ++C+ WWIPS +S
Sbjct: 58  FNRKIGVKETRMDSIKREIFQLCSFFLIFHGIFLTILFTSSSDNKEEHTCKKWWIPSLVS 117

Query: 417 LFTSIVMIFL 446
           + TS+V + L
Sbjct: 118 ISTSLVFVSL 127


>ref|NP_200423.2| uncharacterized protein [Arabidopsis thaliana]
           gi|38603818|gb|AAR24654.1| At5g56120 [Arabidopsis
           thaliana] gi|51971979|dbj|BAD44654.1| putative protein
           [Arabidopsis thaliana] gi|332009340|gb|AED96723.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 236

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/139 (50%), Positives = 93/139 (66%), Gaps = 19/139 (13%)
 Frame = +3

Query: 90  DHHVVEIPVLNEDQQHQQKA------------LVAIQNHPLMEISQSPGHLLLLKLWQRE 233
           D HVVEIPV  E ++ QQ+             L  IQ HPL EIS+SPGHLLLLKLWQRE
Sbjct: 6   DSHVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLLLKLWQRE 65

Query: 234 ENLYNRRISIKETRIDRTRSEIFQLCCFFFAFYGLLLTFLYTSS-------IRGTNSCRN 392
           E+L+ RR+ +KE+R++  + EIFQLCCFF  F+G   T +Y+SS       ++    C+ 
Sbjct: 66  EDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDADVVKSNAVCKK 125

Query: 393 WWIPSSLSLFTSIVMIFLV 449
           WWIPS++SL TS+V++FLV
Sbjct: 126 WWIPSAVSLATSLVLVFLV 144


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