BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018809
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   193   2e-47
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   184   6e-45
ref|XP_004138727.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   184   6e-45
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              181   5e-44
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   181   5e-44

>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  193 bits (490), Expect = 2e-47
 Identities = 92/141 (65%), Positives = 108/141 (76%)
 Frame = +3

Query: 9    EAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSLKKEFKHSFENLGNGFQQLTEDEKNTL 188
            E EVVTGH+WSMPK NSRKQGELKE+LKQ+YHSLKKEF+  FE + + F+QLTEDEKN L
Sbjct: 1068 EEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLL 1127

Query: 189  YEQKASAWYQVTYHPRWVAKSLELKEPXXXXXXXXXXXXXXSFGWIPVEYLVRIKIRCRG 368
            YEQKASAWYQV YHP+WV KS+EL+EP              SF WI  +YL RIKIRCRG
Sbjct: 1128 YEQKASAWYQVAYHPKWVNKSMELQEP-----DAAGCASMLSFAWIAADYLARIKIRCRG 1182

Query: 369  TKDLDTRKPINSLAQYLSERI 431
               +DT KP+NSL +YL++RI
Sbjct: 1183 FDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  184 bits (468), Expect = 6e-45
 Identities = 90/143 (62%), Positives = 105/143 (73%)
 Frame = +3

Query: 3    NGEAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSLKKEFKHSFENLGNGFQQLTEDEKN 182
            N E E+VTGH+WSMPKY SRKQGELKEKLK +Y +LKK+F+  FENLG  F+QLT DE+N
Sbjct: 1060 NREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERN 1119

Query: 183  TLYEQKASAWYQVTYHPRWVAKSLELKEPXXXXXXXXXXXXXXSFGWIPVEYLVRIKIRC 362
             LYE+KASAWYQV YHP W+ KSLEL+EP              SF WI  +YL RIKI+C
Sbjct: 1120 ALYEKKASAWYQVAYHPTWLKKSLELREP-----DAPEAVPMLSFPWIAADYLARIKIKC 1174

Query: 363  RGTKDLDTRKPINSLAQYLSERI 431
            R TK  D  KPINSLA YLS+R+
Sbjct: 1175 RRTKSFDPTKPINSLASYLSDRM 1197


>ref|XP_004138727.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  184 bits (468), Expect = 6e-45
 Identities = 90/143 (62%), Positives = 105/143 (73%)
 Frame = +3

Query: 3    NGEAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSLKKEFKHSFENLGNGFQQLTEDEKN 182
            N E E+VTGH+WSMPKY SRKQGELKEKLK +Y +LKK+F+  FENLG  F+QLT DE+N
Sbjct: 1060 NREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERN 1119

Query: 183  TLYEQKASAWYQVTYHPRWVAKSLELKEPXXXXXXXXXXXXXXSFGWIPVEYLVRIKIRC 362
             LYE+KASAWYQV YHP W+ KSLEL+EP              SF WI  +YL RIKI+C
Sbjct: 1120 ALYEKKASAWYQVAYHPTWLKKSLELREP-----DAPEAVPMLSFPWIAADYLARIKIKC 1174

Query: 363  RGTKDLDTRKPINSLAQYLSERI 431
            R TK  D  KPINSLA YLS+R+
Sbjct: 1175 RRTKSFDPTKPINSLASYLSDRM 1197


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  181 bits (460), Expect = 5e-44
 Identities = 90/141 (63%), Positives = 104/141 (73%)
 Frame = +3

Query: 9    EAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSLKKEFKHSFENLGNGFQQLTEDEKNTL 188
            E EVVTGHVWSMPKY SRKQGEL E+LK AY SLKKEF+  FE + + F QLT+DEKN L
Sbjct: 899  EEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRL 958

Query: 189  YEQKASAWYQVTYHPRWVAKSLELKEPXXXXXXXXXXXXXXSFGWIPVEYLVRIKIRCRG 368
            YEQKASAWYQVTYHP WV KSLEL+ P              SF WI  +YL RIKIR +G
Sbjct: 959  YEQKASAWYQVTYHPTWVKKSLELQNP----DEVFGERVMLSFAWITADYLARIKIRRKG 1014

Query: 369  TKDLDTRKPINSLAQYLSERI 431
            T ++D+ KPINSLA++L +RI
Sbjct: 1015 TGNVDSSKPINSLARFLVDRI 1035


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  181 bits (460), Expect = 5e-44
 Identities = 90/141 (63%), Positives = 104/141 (73%)
 Frame = +3

Query: 9    EAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSLKKEFKHSFENLGNGFQQLTEDEKNTL 188
            E EVVTGHVWSMPKY SRKQGEL E+LK AY SLKKEF+  FE + + F QLT+DEKN L
Sbjct: 1061 EEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRL 1120

Query: 189  YEQKASAWYQVTYHPRWVAKSLELKEPXXXXXXXXXXXXXXSFGWIPVEYLVRIKIRCRG 368
            YEQKASAWYQVTYHP WV KSLEL+ P              SF WI  +YL RIKIR +G
Sbjct: 1121 YEQKASAWYQVTYHPTWVKKSLELQNP----DEVFGERVMLSFAWITADYLARIKIRRKG 1176

Query: 369  TKDLDTRKPINSLAQYLSERI 431
            T ++D+ KPINSLA++L +RI
Sbjct: 1177 TGNVDSSKPINSLARFLVDRI 1197