BLASTX nr result

ID: Cimicifuga21_contig00018807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018807
         (1519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32233.3| unnamed protein product [Vitis vinifera]              112   3e-22
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...   107   3e-21
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]   108   4e-21
emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]   105   2e-20
emb|CBI26086.3| unnamed protein product [Vitis vinifera]              104   5e-20

>emb|CBI32233.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  112 bits (280), Expect = 3e-22
 Identities = 50/125 (40%), Positives = 74/125 (59%)
 Frame = -3

Query: 1130 DAAFRKDFVTICLEEVNSEGYCGTSLKQCSWNRLIEELSEKYKTKYIQRQLKNQWDYLRK 951
            D   RK F+ +CL+E N     G  LK  +W R+ E+L +  + +Y  +QLKN WDY+++
Sbjct: 14   DPIQRKHFIDLCLQEANKGFRSGGGLKFSAWPRIAEKLEKLLRKRYTSKQLKNGWDYMKR 73

Query: 950  LYAAWRYLEKRTEHGYDAEAGTFQWPDNVWEDIIKKYPMTAQFRYTPLEHRDLLQSLFEC 771
             Y  W  +   T HGY++   TF WP   WE+ ++KYP T QFR+ PL + + L++LFE 
Sbjct: 74   QYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPETKQFRFKPLANVEELEALFEG 133

Query: 770  TLTKG 756
             L  G
Sbjct: 134  VLATG 138


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like [Vitis
            vinifera] gi|297739472|emb|CBI29654.3| unnamed protein
            product [Vitis vinifera]
          Length = 299

 Score =  107 bits (267), Expect(2) = 3e-21
 Identities = 47/125 (37%), Positives = 71/125 (56%)
 Frame = -3

Query: 1130 DAAFRKDFVTICLEEVNSEGYCGTSLKQCSWNRLIEELSEKYKTKYIQRQLKNQWDYLRK 951
            D   RK F+ +CL+E N        LK  +W R+ EEL +    ++  +QLKN+WDY+++
Sbjct: 42   DPIQRKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLKNEWDYMKR 101

Query: 950  LYAAWRYLEKRTEHGYDAEAGTFQWPDNVWEDIIKKYPMTAQFRYTPLEHRDLLQSLFEC 771
             Y  W  +   T HGY++   TF WP   WE+ ++KYP   QFR+ PL + + L++LF  
Sbjct: 102  QYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPLANMEELEALFGG 161

Query: 770  TLTKG 756
             L  G
Sbjct: 162  VLATG 166



 Score = 22.3 bits (46), Expect(2) = 3e-21
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 1386 RRIQVPRSKNEEAPSFS-VSCNLASSHPFFDSEIL*QNLDFPVRRSQF 1246
            +R+  P+S+NE+A  FS +S N+         EI   N   P++R  F
Sbjct: 11   KRLNQPQSENEKAKKFSRMSQNV---------EISKANWTDPIQRKHF 49


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score =  108 bits (270), Expect = 4e-21
 Identities = 48/121 (39%), Positives = 70/121 (57%)
 Frame = -3

Query: 1118 RKDFVTICLEEVNSEGYCGTSLKQCSWNRLIEELSEKYKTKYIQRQLKNQWDYLRKLYAA 939
            RK F+ +CL+E N     G  LK  +W R+ EEL +    +Y  +QLKN WDY+++ Y  
Sbjct: 18   RKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGWDYMKRQYLI 77

Query: 938  WRYLEKRTEHGYDAEAGTFQWPDNVWEDIIKKYPMTAQFRYTPLEHRDLLQSLFECTLTK 759
            W  +   T HGY++   TF WP   WE+ ++KYP   QFR+ PL + + L++LF   L  
Sbjct: 78   WSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPLANVEELEALFGGVLAT 137

Query: 758  G 756
            G
Sbjct: 138  G 138


>emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]
          Length = 473

 Score =  105 bits (263), Expect = 2e-20
 Identities = 48/125 (38%), Positives = 70/125 (56%)
 Frame = -3

Query: 1130 DAAFRKDFVTICLEEVNSEGYCGTSLKQCSWNRLIEELSEKYKTKYIQRQLKNQWDYLRK 951
            D   RK F+ +CL+E N     G  LK  +W R+ E L +    +Y  +QLKN WDY+++
Sbjct: 50   DPIQRKHFIDLCLQEANKGFRSGGGLKXSAWPRIAEXLEKLLXKRYTSKQLKNGWDYMKR 109

Query: 950  LYAAWRYLEKRTEHGYDAEAGTFQWPDNVWEDIIKKYPMTAQFRYTPLEHRDLLQSLFEC 771
             Y  W  +     HGY++   TF W    WE+ ++KYP T QFR+ PL + + L++LFE 
Sbjct: 110  QYLIWSKMMTMXGHGYNSVTKTFDWXAEKWEEYLQKYPETKQFRFKPLANVEELEALFEG 169

Query: 770  TLTKG 756
             L  G
Sbjct: 170  VLATG 174


>emb|CBI26086.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  104 bits (260), Expect = 5e-20
 Identities = 51/126 (40%), Positives = 72/126 (57%)
 Frame = -3

Query: 1133 ADAAFRKDFVTICLEEVNSEGYCGTSLKQCSWNRLIEELSEKYKTKYIQRQLKNQWDYLR 954
            +D   RK F+ +CL E NS    G +LK  SW R+I+EL +    ++ Q+QLKN WDY++
Sbjct: 33   SDPTQRKHFIDLCLHEANSGFRSGGTLKPSSWPRIIKELEKLVGKRFNQKQLKNAWDYMK 92

Query: 953  KLYAAWRYLEKRTEHGYDAEAGTFQWPDNVWEDIIKKYPMTAQFRYTPLEHRDLLQSLFE 774
            K Y  W  L      GY++   TF  P   WE+ ++KYP   QFRY PL + + L++LF 
Sbjct: 93   KQYLTWSRLITMMGDGYNSVTKTFDLPTERWEEYLQKYPEAKQFRYRPLANAEELEALFG 152

Query: 773  CTLTKG 756
              L  G
Sbjct: 153  GVLAIG 158


Top