BLASTX nr result

ID: Cimicifuga21_contig00018781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018781
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    64   1e-08
gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indi...    59   4e-07
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    58   7e-07
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2    CRSWRSIAIGRRCNAFFRKNLPWLMLSQTXXXXXXCCTRSFFSFSENKVHHLDLPRARDC 181
            C+SW SI   + C     K+ PWLML++          R F+S    KV+ + LP     
Sbjct: 950  CKSWYSIFEDKECCCPSSKS-PWLMLAEKENSEI----RGFYSPLSGKVYEIRLPEVVGK 1004

Query: 182  DCWGSPYGWSVTCYGSELE--ILNPLSNVCVSLPPL 283
             CWGSPYGW VT  G++L+  +LNPL+ V + LP L
Sbjct: 1005 WCWGSPYGWLVT-IGTDLDMCLLNPLTRVQILLPSL 1039


>gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indica Group]
          Length = 334

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/94 (37%), Positives = 43/94 (45%)
 Frame = +2

Query: 2   CRSWRSIAIGRRCNAFFRKNLPWLMLSQTXXXXXXCCTRSFFSFSENKVHHLDLPRARDC 181
           C+SWRS    R          PWLML          C R F   S+  VH +DLP  R  
Sbjct: 33  CKSWRSFLRPR-------SRPPWLMLPYDPCSES--CVRGFLDASDGTVHEIDLPDTRGK 83

Query: 182 DCWGSPYGWSVTCYGSELEILNPLSNVCVSLPPL 283
            C GS +GW V     ++ +LNP +   V LPPL
Sbjct: 84  RCCGSSHGWLVLERWPDVWLLNPATRERVQLPPL 117


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
 Frame = +2

Query: 2   CRSWRSIAIGRRCNAFFRKNLPWLMLSQTXXXXXXCCTRSFFSFSENKVHHLDLP----R 169
           C +WR  +I +  N      LPWLML Q+         R+FFS S NK H L+LP    R
Sbjct: 33  CHAWR-FSIPKTPN-HLPPQLPWLMLPQSQSQSNQS-RRAFFSLSTNKFHFLNLPEVSYR 89

Query: 170 ARDCDCWGSPYGWSVTCYGSE-LEILNPLSNVCVSLPPLSSF 292
            R C   GS +GW +    +  + ++NPL+   +SLPPLSSF
Sbjct: 90  KRHC---GSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSF 128


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CRSWRSIAIGRRCNAFFRKNLPWLMLSQTXXXXXXCCTRSFFSFSENKVHHLDLPRARDC 181
           C+SW S AI ++ +    + LPWL+L            R F++ ++ K +HL+LP   + 
Sbjct: 32  CKSWWS-AIPKKPHDLLCQ-LPWLLLPYHKNNPNH---RGFYNLADGKTYHLELPETIEK 86

Query: 182 DCWGSPYGWSVTCYGS-ELEILNPLSNVCVSLPPLSSFEYY 301
            C GS +GW V    +  + +LNPL+   + LP LS+F Y+
Sbjct: 87  RCCGSSHGWLVMVEDTPSIFLLNPLTKARIELPSLSTFPYF 127


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CRSWRSIAIGRRCNAFFRKNLPWLMLSQTXXXXXXCCTRSFFSFSENKVHHLDLPRARDC 181
           C SW+S AI +R +      LP+L+L            R F++ S++K++ L+LP A + 
Sbjct: 33  CGSWQS-AIAKRPHNHLLCQLPFLLLPYYQNNPDR---RGFYNISDDKIYVLELPEAYEK 88

Query: 182 DCWGSPYGWSVTCYGS-ELEILNPLSNVCVSLPPLSSFEYY 301
            C GS +GW +    S  + +LNPL+   + LP LS+F  +
Sbjct: 89  RCCGSSHGWLIMVEDSPSIFLLNPLTRERIELPALSTFSIF 129


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