BLASTX nr result

ID: Cimicifuga21_contig00018780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018780
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase ...   195   3e-48
gb|AFK36548.1| unknown [Lotus japonicus]                              185   4e-45
ref|XP_004136220.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   182   3e-44
ref|XP_003603620.1| Peptidyl-tRNA hydrolase [Medicago truncatula...   177   8e-43
ref|XP_003603619.1| Peptidyl-tRNA hydrolase [Medicago truncatula...   177   8e-43

>ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase 2-like [Vitis vinifera]
           gi|296081837|emb|CBI20842.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/134 (71%), Positives = 114/134 (85%)
 Frame = +2

Query: 2   WLGMSFSPENFIPGLVIGFLFGMFLDLTKLPRNNPKRKQLPSSISSKQKHQQRQQMSSGS 181
           W  ++F PENFIPGL+IGF+FG FLDL+K+P+N P+     +S+  K++ QQ+Q +SS S
Sbjct: 20  WFAVNFKPENFIPGLIIGFIFGFFLDLSKVPKNQPRHN---NSLLGKRQ-QQQQLVSSNS 75

Query: 182 EEELKMVLVVRQDLRMGAGKIASQCAHAATGTYAEMMQSQRSLLRQWEYCGQPKIVVTCK 361
           +EELKMVLVVRQDL+MG GKIASQCAHAATG YAE++QSQRSLLRQWE CGQ KIVVTCK
Sbjct: 76  DEELKMVLVVRQDLKMGTGKIASQCAHAATGMYAELVQSQRSLLRQWEQCGQAKIVVTCK 135

Query: 362 NQQEMNKLKEMAES 403
           NQQEMNKLKE AES
Sbjct: 136 NQQEMNKLKEAAES 149


>gb|AFK36548.1| unknown [Lotus japonicus]
          Length = 195

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/134 (69%), Positives = 103/134 (76%)
 Frame = +2

Query: 2   WLGMSFSPENFIPGLVIGFLFGMFLDLTKLPRNNPKRKQLPSSISSKQKHQQRQQMSSGS 181
           WL  SF PENFIPGL+IGF+FGMFLDL+K     P R  L   I S  K QQ   +S   
Sbjct: 23  WLAGSFKPENFIPGLIIGFIFGMFLDLSK-----PHRNLLSKKIFSPSKVQQHLTLSGNG 77

Query: 182 EEELKMVLVVRQDLRMGAGKIASQCAHAATGTYAEMMQSQRSLLRQWEYCGQPKIVVTCK 361
           + E KMVLVVRQDL+M +GK+ASQCAHAATG YAE+MQS RSLLRQWE CGQPKIVVTC+
Sbjct: 78  DREFKMVLVVRQDLKMKSGKVASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCR 137

Query: 362 NQQEMNKLKEMAES 403
           NQQEMNKLKE AES
Sbjct: 138 NQQEMNKLKETAES 151


>ref|XP_004136220.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus] gi|449517243|ref|XP_004165655.1| PREDICTED:
           peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus]
          Length = 192

 Score =  182 bits (461), Expect = 3e-44
 Identities = 91/135 (67%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   WLGMSFSPENFIPGLVIGFLFGMFLDLTKLPRNNPKRKQ-LPSSISSKQKHQQRQQMSSG 178
           WL +SF PENFIPGLVIGF+ G+FLDL+K  + N K+   LPS      K+QQ    S+ 
Sbjct: 20  WLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPS------KYQQLSPASNN 73

Query: 179 SEEELKMVLVVRQDLRMGAGKIASQCAHAATGTYAEMMQSQRSLLRQWEYCGQPKIVVTC 358
            ++ELK+VLVVRQDL+MG+GKIASQCAHAATG YAE+MQS R+LLRQWE CGQPKIVVTC
Sbjct: 74  GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTC 133

Query: 359 KNQQEMNKLKEMAES 403
           KNQ EMNKLK+ AE+
Sbjct: 134 KNQHEMNKLKDSAEN 148


>ref|XP_003603620.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355492668|gb|AES73871.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula] gi|388498994|gb|AFK37563.1|
           unknown [Medicago truncatula]
          Length = 174

 Score =  177 bits (449), Expect = 8e-43
 Identities = 92/135 (68%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   WLGMSFSPENFIPGLVIGFLFGMFLDLTKLPRNNPKRKQLPSSISSKQKHQQRQQMSS-G 178
           WL  SF PENFIPGLVIGF+ G+ +DL+K     P R  L + I S  K Q +  +SS G
Sbjct: 20  WLSGSFKPENFIPGLVIGFICGLLIDLSK-----PTRNHLSNKIFSSTKLQNQLSVSSNG 74

Query: 179 SEEELKMVLVVRQDLRMGAGKIASQCAHAATGTYAEMMQSQRSLLRQWEYCGQPKIVVTC 358
           +++ELKMVLVVRQDL+M +GKIASQCAHAATG YAE+M+S RSLLRQWE CGQPKIVVTC
Sbjct: 75  ADQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMRSNRSLLRQWEQCGQPKIVVTC 134

Query: 359 KNQQEMNKLKEMAES 403
           KNQQEMNKL E AES
Sbjct: 135 KNQQEMNKLTEAAES 149


>ref|XP_003603619.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355492667|gb|AES73870.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula] gi|388514387|gb|AFK45255.1|
           unknown [Medicago truncatula]
          Length = 193

 Score =  177 bits (449), Expect = 8e-43
 Identities = 92/135 (68%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   WLGMSFSPENFIPGLVIGFLFGMFLDLTKLPRNNPKRKQLPSSISSKQKHQQRQQMSS-G 178
           WL  SF PENFIPGLVIGF+ G+ +DL+K     P R  L + I S  K Q +  +SS G
Sbjct: 20  WLSGSFKPENFIPGLVIGFICGLLIDLSK-----PTRNHLSNKIFSSTKLQNQLSVSSNG 74

Query: 179 SEEELKMVLVVRQDLRMGAGKIASQCAHAATGTYAEMMQSQRSLLRQWEYCGQPKIVVTC 358
           +++ELKMVLVVRQDL+M +GKIASQCAHAATG YAE+M+S RSLLRQWE CGQPKIVVTC
Sbjct: 75  ADQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMRSNRSLLRQWEQCGQPKIVVTC 134

Query: 359 KNQQEMNKLKEMAES 403
           KNQQEMNKL E AES
Sbjct: 135 KNQQEMNKLTEAAES 149


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