BLASTX nr result

ID: Cimicifuga21_contig00018765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018765
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309042.1| predicted protein [Populus trichocarpa] gi|1...    76   4e-23
ref|XP_002278904.1| PREDICTED: uncharacterized protein LOC100253...    77   1e-22
ref|XP_002522055.1| conserved hypothetical protein [Ricinus comm...    76   1e-21
emb|CAB67670.1| putative protein [Arabidopsis thaliana]                76   1e-20
ref|NP_190931.2| uncharacterized protein [Arabidopsis thaliana] ...    76   1e-20

>ref|XP_002309042.1| predicted protein [Populus trichocarpa] gi|118482905|gb|ABK93366.1|
           unknown [Populus trichocarpa]
           gi|222855018|gb|EEE92565.1| predicted protein [Populus
           trichocarpa]
          Length = 201

 Score = 76.3 bits (186), Expect(2) = 4e-23
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -3

Query: 144 GTPHRVWEWHGHIMLFDEENGYTP*YIYGNYFERLLVK 31
           G+ +RVWEWHGHIMLFDEE+GYTP YIYGNYFERLL K
Sbjct: 105 GSDYRVWEWHGHIMLFDEEDGYTPEYIYGNYFERLLGK 142



 Score = 56.6 bits (135), Expect(2) = 4e-23
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -1

Query: 218 EIIRVILSAKIETLKPNSGQAVTIGEHHIVFG 123
           EIIRVILS KI++LKPNSGQAVTIGEHHI  G
Sbjct: 68  EIIRVILSGKIDSLKPNSGQAVTIGEHHICVG 99


>ref|XP_002278904.1| PREDICTED: uncharacterized protein LOC100253357 [Vitis vinifera]
           gi|297741554|emb|CBI32686.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score = 77.0 bits (188), Expect(2) = 1e-22
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -3

Query: 144 GTPHRVWEWHGHIMLFDEENGYTP*YIYGNYFERLLVK 31
           G+ +RVWEWHGHIMLFDEENGYTP YIYGNYFER+ VK
Sbjct: 110 GSDYRVWEWHGHIMLFDEENGYTPEYIYGNYFERVPVK 147



 Score = 54.3 bits (129), Expect(2) = 1e-22
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -1

Query: 218 EIIRVILSAKIETLKPNSGQAVTIGEHHIVFG 123
           EIIR+ILS  I++LKPNSGQAVTIGEHHI  G
Sbjct: 73  EIIRIILSGNIQSLKPNSGQAVTIGEHHICVG 104


>ref|XP_002522055.1| conserved hypothetical protein [Ricinus communis]
           gi|223538654|gb|EEF40255.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score = 75.9 bits (185), Expect(2) = 1e-21
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -3

Query: 144 GTPHRVWEWHGHIMLFDEENGYTP*YIYGNYFERL 40
           G+ +RVWEWHGHIMLFDEENGYTP YIYGNYFERL
Sbjct: 112 GSDYRVWEWHGHIMLFDEENGYTPEYIYGNYFERL 146



 Score = 52.0 bits (123), Expect(2) = 1e-21
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = -1

Query: 218 EIIRVILSAKIETLKPNSGQAVTIGEHHIVFG 123
           +IIR+ILS K  +LKPNSGQAVTIGEHHI  G
Sbjct: 75  DIIRIILSGKTASLKPNSGQAVTIGEHHICVG 106


>emb|CAB67670.1| putative protein [Arabidopsis thaliana]
          Length = 210

 Score = 75.9 bits (185), Expect(2) = 1e-20
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 135 HRVWEWHGHIMLFDEENGYTP*YIYGNYFERLLVK 31
           +RVWEWHGHIMLFDEENGYTP YIYGNYFERL VK
Sbjct: 108 YRVWEWHGHIMLFDEENGYTPEYIYGNYFERLPVK 142



 Score = 48.5 bits (114), Expect(2) = 1e-20
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -1

Query: 218 EIIRVILSAKIETLKPNSGQAVTIGEHHIVFG 123
           E+IRVI+S + ++LKPNSGQAVT+ EHHI  G
Sbjct: 68  ELIRVIVSGRSDSLKPNSGQAVTVNEHHICVG 99


>ref|NP_190931.2| uncharacterized protein [Arabidopsis thaliana]
           gi|18377877|gb|AAL67124.1| AT3g53630/F4P12_330
           [Arabidopsis thaliana] gi|20453315|gb|AAM19896.1|
           AT3g53630/F4P12_330 [Arabidopsis thaliana]
           gi|332645600|gb|AEE79121.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 194

 Score = 75.9 bits (185), Expect(2) = 1e-20
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 135 HRVWEWHGHIMLFDEENGYTP*YIYGNYFERLLVK 31
           +RVWEWHGHIMLFDEENGYTP YIYGNYFERL VK
Sbjct: 108 YRVWEWHGHIMLFDEENGYTPEYIYGNYFERLPVK 142



 Score = 48.5 bits (114), Expect(2) = 1e-20
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -1

Query: 218 EIIRVILSAKIETLKPNSGQAVTIGEHHIVFG 123
           E+IRVI+S + ++LKPNSGQAVT+ EHHI  G
Sbjct: 68  ELIRVIVSGRSDSLKPNSGQAVTVNEHHICVG 99


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