BLASTX nr result

ID: Cimicifuga21_contig00018739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018739
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258...    59   5e-07
ref|XP_002301506.1| multidrug resistance protein ABC transporter...    55   5e-06

>ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258949 [Vitis vinifera]
          Length = 196

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +1

Query: 13  SAEGLLPLFIRGCKMGGIGVETNAVLLRNNHH-ILEKLENSSNKMKLLPENFDVRTEFLS 189
           S+  LLP F + C   G G     VL R     ++E  E        LPE  + R E+LS
Sbjct: 109 SSSRLLPFFAKICP-AGTGDGPGYVLNRKEKSLVMESPEERCKPEFDLPEALEGRPEYLS 167

Query: 190 RQFSGKGWKPSLDXXXXXXXXXXXSHWLF 276
           RQFSGKGWKPSLD            HWLF
Sbjct: 168 RQFSGKGWKPSLDTIEEKKIEKKVPHWLF 196


>ref|XP_002301506.1| multidrug resistance protein ABC transporter family protein
           [Populus trichocarpa] gi|222843232|gb|EEE80779.1|
           multidrug resistance protein ABC transporter family
           protein [Populus trichocarpa]
          Length = 197

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
 Frame = +1

Query: 1   ALLSSAEGLLPLFIRGCKMGGIGVETNAVLLRNNHHILEK--LENSSNKMKLLPENFDVR 174
           +LLSS+    PLF R C   G G E   V+ +   H+ EK  +EN  +++  + E+   R
Sbjct: 108 SLLSSSR-FFPLFARICP-SGTGEEQIFVMQKKECHVEEKPAMENYDSELTEISES---R 162

Query: 175 TEFLSRQFSGKG-WKPSLDXXXXXXXXXXXSHWLF 276
            E+LSRQ SGKG WKPSLD            HWLF
Sbjct: 163 PEYLSRQLSGKGTWKPSLDTIKEKKVEKKTPHWLF 197


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