BLASTX nr result

ID: Cimicifuga21_contig00018728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018728
         (1657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]   137   6e-30
emb|CBI15337.3| unnamed protein product [Vitis vinifera]              123   2e-25
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-21
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-20
emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]   104   6e-20

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score =  137 bits (346), Expect = 6e-30
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 20/398 (5%)
 Frame = -3

Query: 1277 LPPEIVFEILLRSPADSLIGCKRVCKSWYGLIKNSQFMKLHIIRSMDQRHHLRVMLLGLP 1098
            LP +I+ +IL   P + ++ C+ VCK+WYGL K+S F KL   R+    H  R+M +   
Sbjct: 20   LPLDIMADILSLLPIEDILRCRSVCKTWYGLTKDSYFFKLQFRRTF--YHMPRLMFIS-- 75

Query: 1097 CDGDDNEYKYMHSVYSLAEEGNHKWRAIQDNPLKGVAMEVGFRLCILVSCNGLHCVSPNR 918
                    K  +SV+ L +    K R I       +   +G  L ++ SCNGL C++ + 
Sbjct: 76   --------KSENSVF-LLDGKQCKAREI------ALPTVLGRNLIVMSSCNGLLCLA-SE 119

Query: 917  DLLDPLFVCNLIIRECVKLPVEKERVIARSPSTGREVSLWKTDPSLYVFHQEIGFGYDPL 738
            +  +P+ + N I R+ + LP   E V A                  Y F Q +G GYDP 
Sbjct: 120  ESPNPVIISNPITRKYIVLP---ESVNAS-----------------YSFIQLVGLGYDPW 159

Query: 737  SEKYKLVRMFLIDDYGNICTAGEILTMGERSWRILEFPHTLHWSSQPETLFLEGSFYWII 558
            + KYK+VR ++ +   +  T  EI+T+GE SWR L+ P  +        ++ EG+ YWI+
Sbjct: 160  NMKYKVVRSYIDN---SKFTRFEIITLGEASWRQLDVPCRVVCGRNSRPIYCEGALYWIL 216

Query: 557  DNSSDSLCPDNILAFDIPNEKFRTLRFPPSLEIENDGNNRI------LMNVGGLLSLVEK 396
            D          ILAFD+  EKF  +  PP++ +   GN  +      L+NV G L+++  
Sbjct: 217  DKKFHYDGDGCILAFDLREEKFGMIALPPNIRMPT-GNPGLYNGSLHLLNVAGCLTVIAD 275

Query: 395  DEGNARIWQMMDD------------NWTCQYTIEIEGVLCSGVNINDNILLHVNSNRCTS 252
            +     IWQ+M +            +  C++++  + VL       D++LL V+     S
Sbjct: 276  ECQFLHIWQVMRNRDRGFSVRYRRSDMHCRWSVFSQPVLLDW--CKDSLLLSVSKFGVYS 333

Query: 251  R--LFLYDTTEKKAFEIEVSESPSAFRMTSFLPSLVSP 144
               L  Y    K+     +   P  FR  SF P+L+SP
Sbjct: 334  ERDLVEYFPERKQYAGHHIRGLPKWFRSCSFKPNLISP 371


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  123 bits (308), Expect = 2e-25
 Identities = 110/403 (27%), Positives = 184/403 (45%), Gaps = 25/403 (6%)
 Frame = -3

Query: 1277 LPPEIVFEILLRSPADSLIGCKRVCKSWYGLIKNSQFMKLHIIRSMDQ--RHHLRVMLLG 1104
            L PE++ EIL R P + ++ C+ VCK+W  +I++  F+ L   +S +Q  R  L+ +  G
Sbjct: 154  LLPELISEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKPIFGG 213

Query: 1103 LPCDGDDNEYKYMHSVYSLAEEGNHKWRAIQDNPLKGVAMEVGFRLCILVSCNGLHCVSP 924
            +           MHS++ L  E   K R I D   +   ++      I+ SCNGL C++ 
Sbjct: 214  VTA-------TTMHSLFLLDTE-ERKSRRIHDKSWRFSGLQ------IMSSCNGLLCITS 259

Query: 923  NRDLLDPLFVCNLIIRECVKLPVEKERVIARSPSTGREVSLWKTDPSLYVFHQEIGFGYD 744
            + + L P+++ N I RE V LP         SP TG             +   ++G G+D
Sbjct: 260  DSE-LGPVYISNPITREFVILP---------SPETG-----------FSLLRHQVGLGFD 298

Query: 743  PLSEKYKLVRMFLIDDYGNICTAGEILTMGERSWRILEFPHTLHWSSQPETLFLEGSFYW 564
              + KY +VR +  D   +     E + +GE SWR L  P  +   +   ++F  G+ +W
Sbjct: 299  SSNGKYIVVRAY-TDKSKSQVNKFEAIMLGENSWRSLTVPDIIAECTINGSVFWNGALHW 357

Query: 563  IIDNSSDSLCPDNILAFDIPNEKFRTLRFPPSLEIENDGNNRILMNVGGLLSLVEKDEGN 384
             I       C   +L+FD+ + KF   RFP S ++ +D     ++ + G LSLV+  +  
Sbjct: 358  KIKKKPGREC---MLSFDVSSGKFAVTRFPVSADVPDDFE---MVELDGHLSLVQVYDTQ 411

Query: 383  ARIWQM-----------------MDDNWTCQYTIE-IEGVLCSGVNINDNILLHVNSNRC 258
             +IW++                 M+  W   +  E I G       I++  LL VN++R 
Sbjct: 412  MKIWRVTGEKIEGLSVCYEDMYCMNVRWNSSFNCEIIRGY------IDEGYLLQVNTHRG 465

Query: 257  TS---RLFL--YDTTEKKAFEIEVSESPSAFRMTSFLPSLVSP 144
                 R +L  Y    ++   + +   P  F+  SF P+L+SP
Sbjct: 466  PGGAWRRYLTQYFPKMEQFLSLIIPSIPICFKTISFRPTLISP 508


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  110 bits (274), Expect = 1e-21
 Identities = 106/403 (26%), Positives = 185/403 (45%), Gaps = 19/403 (4%)
 Frame = -3

Query: 1280 ILPPEIVFEILLRSPADSLIGCKRVCKSWYGLIKNSQFMKLHIIRSMDQRHHLRVMLLGL 1101
            ILPPE+  E+L R P +S++  + VCKSW  +I++  F+ L +   + +    R  ++  
Sbjct: 20   ILPPEMFCEVLARLPVESILRFRSVCKSWCRMIQSPYFISLQL--GVTKNKPCR-FIVQS 76

Query: 1100 PCDGDDNEYKYMHSVYSLAEEGNHKWRAIQDNPLKGVAMEVGFRLCIL---VSCNGLHCV 930
              +GD      M S+Y L +  + K R IQ   +K     + F+L  L     C+G  C+
Sbjct: 77   QREGD------MSSLY-LVDIEDLKAREIQLEKIK-CRTRLKFKLPALGVRCFCDGFLCM 128

Query: 929  SPNRDLLDPLFVCNLIIRECVKLPVEKERVIARSPSTGREVSLWKTDPSLYVFHQEIGFG 750
            +  +  LDP+ +CN I +E V LP+ + +                     ++   ++ FG
Sbjct: 129  ASEK-RLDPVCICNPITKESVILPLSRSKA--------------------HLVRHKLAFG 167

Query: 749  YDPLSEKYKLVRMFLIDDYGNICTAGEILTMGERSWRILEFPHTLHWSSQPETLFLEGSF 570
            +D  S KYK++R +      ++ +  +I+T+GE SWR L  P  L  S     +F  GS 
Sbjct: 168  FDQSSGKYKVIRDYRTSSNKHL-SKFQIITLGESSWRQLNPPQNLCTSDWDAAVFWNGSL 226

Query: 569  YWIIDNSSDSLCPDNILAFDIPNEKFRTLRFPPSLEIENDGNNRILMNVGGLLSLVEKDE 390
            +WIID   D    + ILAFD+ +E F T+ F   L + ++     L  +G  L++VE + 
Sbjct: 227  HWIID---DKTIDEPILAFDLSSETFYTIPF-HRLCLSHECYE--LQVLGASLTIVEHNS 280

Query: 389  GNARIWQMMDD---NWTCQYTIEIEGVLCSGVNI---------NDNILLHV----NSNRC 258
               +IW++  +    ++     E +  +C    +         + + +L V    N N  
Sbjct: 281  HMIKIWEVAGNKVKGFSANCREEHDTYVCWNKYLFYKTISQLSHKSFMLQVCFIDNKNVK 340

Query: 257  TSRLFLYDTTEKKAFEIEVSESPSAFRMTSFLPSLVSPWAIIT 129
                  +   + + F  ++   P  F    F PS VSP A+++
Sbjct: 341  KDWFTRFVPEKAQYFHQDILGLPEHFNTDHFKPSFVSPNALLS 383


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  105 bits (262), Expect = 4e-20
 Identities = 88/342 (25%), Positives = 152/342 (44%), Gaps = 4/342 (1%)
 Frame = -3

Query: 1343 WRARGEMASCFEVMTSCCNSGILPPEIVFEILLRSPADSLIGCKRVCKSWYGLIKNSQFM 1164
            +R R     C E  +S   +  LP EI  +IL R P +++  CK VCKSW  L+    F 
Sbjct: 5    YRTRLYERKCLEEPSS---TPTLPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPYFA 61

Query: 1163 KLHIIRSMDQRHHLRVMLLGLPCDGDDNEYKYMHSVYSLAEEGNHKWRAIQDNPLKGVAM 984
            +LH  ++          LL   C G+  +   ++  +  +  G++   A+   P K    
Sbjct: 62   RLHFAKAKPS------SLLFCHCSGNKTK---LYCCHIHSSRGSNINNAMVSMPTKFKLP 112

Query: 983  EVGFRLCILVSCNGLHCVSPNRDLLDPLFVCNLIIRECVKLPVEKERVIARSPSTGREVS 804
            +  FR  ++ S NGL C+S    +    ++CN         P+  E +    P       
Sbjct: 113  KNTFRGKVVGSSNGLLCLSEIHRMKKKFYICN---------PITGEYIGIAGP------- 156

Query: 803  LWKTDPSLYVFHQEIGFGYDPLSEKYKLVRMFLIDDYGNICTAGEILTMGERSWRILEFP 624
              K D   +VF + IGF Y+P +++ K++   +   YGN   +G+I T+G  SWR ++ P
Sbjct: 157  --KVDQGWHVF-EPIGFFYNPQNQQCKILMPRVRVGYGNFPGSGQIFTLGSNSWRNIDIP 213

Query: 623  HTLHWSSQPETLFLEGSFYWIIDNSSDSLCPDNILAFDIPNEKFRTLRFPPSLEIENDGN 444
              LH       + L GS +WI           +I +FD+ NE+  ++  P  + +    +
Sbjct: 214  GHLHLI---RAVPLNGSLHWISTRDD-----RHISSFDMENEQALSIALPDQVVM----H 261

Query: 443  NRILMNVGGLLSLVEKDEGNARIWQM----MDDNWTCQYTIE 330
               L  +G  L + + +     IW M    ++++W   YT++
Sbjct: 262  TASLAGLGNFLCIFDNEYPEFNIWVMKEYGVEESWK-HYTVK 302


>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score =  104 bits (260), Expect = 6e-20
 Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 20/351 (5%)
 Frame = -3

Query: 1391 NTYSLMDAIAIWNPSIWRARGEMASCFEVMTSCC-----NSGILPPEIVFEILLRSPADS 1227
            N YS +D   + NP   ++        +   S       N   +P E+VFEIL   P  S
Sbjct: 438  NDYSNLDIYKLGNPKTRKSHAPRMKEKQTRKSHAPRMKENPVSIPDELVFEILTYIPVKS 497

Query: 1226 LIGCKRVCKSWYGLIKNSQFMKLHIIRSMDQRHHLRVMLLGLPCDGDDNEYKYMHSVYSL 1047
            L+ C+ VCK W  +I +  F++ H  RS         +L+  P   D +  +  H ++S+
Sbjct: 498  LLQCRGVCKRWRSMISDPSFIEAHRSRS------ATTLLISFP---DTHRPRRKHHLFSI 548

Query: 1046 AE------EGNHKWRAIQDNPLKGVAMEVGFRLCILVSCNGLHCVSPNRDLLDPLFVCNL 885
             +       G+  W   Q                   S NGL C+    D          
Sbjct: 549  RDGEARQLSGSRHWNTSQ-------------------SVNGLICLYEQHDR--------- 580

Query: 884  IIRECVKLPVEKERVIARSPSTGREVSLWKT---DPSLYVFHQEIGFGYDPLSEKYKLVR 714
                    P    RV   +PST   V+L  T   +P L   HQ I  G+DP ++ YK+++
Sbjct: 581  ------SFPKLSFRVTLCNPSTRERVTLPPTRFSNPDLCFDHQHISLGFDPSTKTYKILK 634

Query: 713  MFLIDDYGNICTAGEILTMGERSWRILEFPHTLHWSSQPETLFLEGSFYWI------IDN 552
            ++       +C   EILT+G R+WRI++    L ++ + + + L G+ YW        D 
Sbjct: 635  VWFERFNSIMC---EILTLGXRAWRIIK--DGLEYTLEAKGICLNGTIYWADARHISEDY 689

Query: 551  SSDSLCPDNILAFDIPNEKFRTLRFPPSLEIENDGNNRILMNVGGLLSLVE 399
                +  + ++AFD+  EKFR++  PP + I +   + I+  +GG +++ +
Sbjct: 690  PHFVVMQNRVIAFDVGEEKFRSVPVPPEVPIWDKCMSSII-QIGGHMAIAD 739


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