BLASTX nr result

ID: Cimicifuga21_contig00018727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018727
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611277.1| Major centromere autoantigen B [Medicago tru...   142   6e-32
ref|XP_003604271.1| Tigger transposable element-derived protein ...   142   6e-32
ref|XP_003619048.1| Tigger transposable element-derived protein ...   142   6e-32
ref|XP_003594119.1| Tigger transposable element-derived protein ...   142   6e-32
gb|ABN09765.1| CENP-B protein [Medicago truncatula]                   142   6e-32

>ref|XP_003611277.1| Major centromere autoantigen B [Medicago truncatula]
           gi|355512612|gb|AES94235.1| Major centromere autoantigen
           B [Medicago truncatula]
          Length = 604

 Score =  142 bits (358), Expect = 6e-32
 Identities = 73/163 (44%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
 Frame = +1

Query: 127 ITLWTMDVRANTIANCFRHCKLRSTDNVTFENSDEG--GESTQELQNLIKELGYRNAMDV 300
           I  WT+DVR  TIANCFRHCK+RS  +V   N DE    E TQ+LQ +I + GYRN MD+
Sbjct: 444 IPAWTIDVRKETIANCFRHCKIRSASDVV-GNLDESTFDEETQDLQTMINQCGYRNKMDI 502

Query: 301 EDVLNHPEEN-VVAQLLTDEEIIESVIGINKXXXXXXXXXSSTMEPPSRNEAIKAAITLN 477
           ++++N+P EN   +++ + E+I+ ++I  N          S  +EP +R EA+ A+ TL+
Sbjct: 503 DNLMNYPGENEACSEVQSLEDIVRTIIENNAEDDDEDDTVS--LEPVTRKEALMASNTLH 560

Query: 478 NFLLSYEKTTPKVLTMLRKIRDEIQGEIDFNKKQKTIESFFKK 606
           NF++ Y+ TTP++L  +RK+RDE+Q +++F  KQ TIES+F K
Sbjct: 561 NFMIQYKNTTPQLLDAIRKVRDELQTDLNFKGKQTTIESYFNK 603


>ref|XP_003604271.1| Tigger transposable element-derived protein [Medicago truncatula]
           gi|355505326|gb|AES86468.1| Tigger transposable
           element-derived protein [Medicago truncatula]
          Length = 414

 Score =  142 bits (358), Expect = 6e-32
 Identities = 72/163 (44%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
 Frame = +1

Query: 127 ITLWTMDVRANTIANCFRHCKLRSTDNVTFENSDEG--GESTQELQNLIKELGYRNAMDV 300
           I  WT+D+R  TIANCFRHCK+RS  +V   N DE    E TQ+LQ +I + GYRN MD+
Sbjct: 254 IPAWTIDIRKETIANCFRHCKIRSASDVV-GNLDESTFDEETQDLQTMINQCGYRNKMDI 312

Query: 301 EDVLNHPEEN-VVAQLLTDEEIIESVIGINKXXXXXXXXXSSTMEPPSRNEAIKAAITLN 477
           ++++N+P EN   +++ + E+I+ ++I  N          S  +EP +R EA+ A+ TL+
Sbjct: 313 DNLMNYPGENEACSEIQSLEDIVRTIIENNAEDDDEDDTVS--LEPVTRKEALMASNTLH 370

Query: 478 NFLLSYEKTTPKVLTMLRKIRDEIQGEIDFNKKQKTIESFFKK 606
           NF++ Y+ TTP++L  +RK+RDE+Q +++F  KQ TIES+F K
Sbjct: 371 NFIIQYKNTTPQLLDAIRKVRDELQTDLNFKGKQTTIESYFNK 413


>ref|XP_003619048.1| Tigger transposable element-derived protein [Medicago truncatula]
           gi|355494063|gb|AES75266.1| Tigger transposable
           element-derived protein [Medicago truncatula]
          Length = 498

 Score =  142 bits (358), Expect = 6e-32
 Identities = 73/163 (44%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
 Frame = +1

Query: 127 ITLWTMDVRANTIANCFRHCKLRSTDNVTFENSDEG--GESTQELQNLIKELGYRNAMDV 300
           I  WT+DVR  TIANCFRHCK+RS  +V   N DE    E TQ+LQ +I + GYRN MD+
Sbjct: 338 IPAWTIDVRKETIANCFRHCKIRSASDVV-GNLDESTFDEETQDLQTMINQCGYRNKMDI 396

Query: 301 EDVLNHPEEN-VVAQLLTDEEIIESVIGINKXXXXXXXXXSSTMEPPSRNEAIKAAITLN 477
           ++++N+P EN   +++ + E+I+ ++I  N          S  +EP +R EA+ A+ TL+
Sbjct: 397 DNLMNYPGENEACSEVQSLEDIVRTIIENNAEDDDEDDTVS--LEPVTRKEALMASNTLH 454

Query: 478 NFLLSYEKTTPKVLTMLRKIRDEIQGEIDFNKKQKTIESFFKK 606
           NF++ Y+ TTP++L  +RK+RDE+Q +++F  KQ TIES+F K
Sbjct: 455 NFMIQYKNTTPQLLDAIRKVRDELQTDLNFKGKQTTIESYFNK 497


>ref|XP_003594119.1| Tigger transposable element-derived protein [Medicago truncatula]
           gi|355483167|gb|AES64370.1| Tigger transposable
           element-derived protein [Medicago truncatula]
          Length = 448

 Score =  142 bits (358), Expect = 6e-32
 Identities = 73/163 (44%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
 Frame = +1

Query: 127 ITLWTMDVRANTIANCFRHCKLRSTDNVTFENSDEG--GESTQELQNLIKELGYRNAMDV 300
           I  WT+DVR  TIANCFRHCK+RS  +V   N DE    E TQ+LQ +I + GYRN MD+
Sbjct: 288 IPAWTIDVRKETIANCFRHCKIRSASDVV-GNLDESTFDEETQDLQTMINQCGYRNKMDI 346

Query: 301 EDVLNHPEEN-VVAQLLTDEEIIESVIGINKXXXXXXXXXSSTMEPPSRNEAIKAAITLN 477
           ++++N+P EN   +++ + E+I+ ++I  N          S  +EP +R EA+ A+ TL+
Sbjct: 347 DNLMNYPGENEACSEVQSLEDIVRTIIENNAEDDDKDDTVS--LEPVTRKEALMASNTLH 404

Query: 478 NFLLSYEKTTPKVLTMLRKIRDEIQGEIDFNKKQKTIESFFKK 606
           NF++ Y+ TTP++L  +RK+RDE+Q +++F  KQ TIES+F K
Sbjct: 405 NFMIQYKNTTPQLLDAIRKVRDELQTDLNFKGKQTTIESYFNK 447


>gb|ABN09765.1| CENP-B protein [Medicago truncatula]
          Length = 247

 Score =  142 bits (358), Expect = 6e-32
 Identities = 73/163 (44%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
 Frame = +1

Query: 127 ITLWTMDVRANTIANCFRHCKLRSTDNVTFENSDEG--GESTQELQNLIKELGYRNAMDV 300
           I  WT+DVR  TIANCFRHCK+RS  +V   N DE    E TQ+LQ +I + GYRN MD+
Sbjct: 87  IPAWTIDVRKETIANCFRHCKIRSASDVV-GNLDESTFDEETQDLQTMINQCGYRNKMDI 145

Query: 301 EDVLNHPEEN-VVAQLLTDEEIIESVIGINKXXXXXXXXXSSTMEPPSRNEAIKAAITLN 477
           ++++N+P EN   +++ + E+I+ ++I  N          S  +EP +R EA+ A+ TL+
Sbjct: 146 DNLMNYPGENEACSEVQSLEDIVRTIIENNAEDDDKDDTVS--LEPVTRKEALMASNTLH 203

Query: 478 NFLLSYEKTTPKVLTMLRKIRDEIQGEIDFNKKQKTIESFFKK 606
           NF++ Y+ TTP++L  +RK+RDE+Q +++F  KQ TIES+F K
Sbjct: 204 NFMIQYKNTTPQLLDAIRKVRDELQTDLNFKGKQTTIESYFNK 246


Top