BLASTX nr result

ID: Cimicifuga21_contig00018721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018721
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002326838.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
gb|ADE77049.1| unknown [Picea sitchensis]                              75   4e-12
ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...    75   7e-12
dbj|BAK06193.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   1e-11

>ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|222844234|gb|EEE81781.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/59 (59%), Positives = 45/59 (76%)
 Frame = +2

Query: 101 KKDIPTIDDPFDPLTYNIP*KAVTFVKGASYSVVILAGISFAISTVYFACDELLFEPKE 277
           KKD+ T++DPFD  TYNIP K VTF +GASYS++ILAG++ A +  Y    EL+FEPKE
Sbjct: 68  KKDVSTVEDPFDAPTYNIPEKPVTFTEGASYSIIILAGLAVAAAAAYAVFKELIFEPKE 126


>ref|XP_002326838.1| predicted protein [Populus trichocarpa] gi|222835153|gb|EEE73588.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = +2

Query: 101 KKDIPTIDDPFDPLTYNIP*KAVTFVKGASYSVVILAGISFAISTVYFACDELLFEPKE 277
           +KD+ T++DPFD  TYNIP K VTF +GASYS++ILAG+  A +  Y    EL+FEPKE
Sbjct: 134 RKDLSTVEDPFDAPTYNIPEKPVTFTEGASYSIIILAGLGVAAAAAYAVFKELIFEPKE 192


>gb|ADE77049.1| unknown [Picea sitchensis]
          Length = 252

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/61 (60%), Positives = 44/61 (72%)
 Frame = +2

Query: 95  QHKKDIPTIDDPFDPLTYNIP*KAVTFVKGASYSVVILAGISFAISTVYFACDELLFEPK 274
           +H KDI T +DPFDPLT  IP K VTFV+GASYSVVI  G++ A +  Y    EL+FEPK
Sbjct: 84  RHNKDITTQEDPFDPLTDQIPVKPVTFVEGASYSVVIFVGLAIAGAAAYAVFKELIFEPK 143

Query: 275 E 277
           E
Sbjct: 144 E 144


>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
           gi|296088479|emb|CBI37470.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/59 (59%), Positives = 43/59 (72%)
 Frame = +2

Query: 101 KKDIPTIDDPFDPLTYNIP*KAVTFVKGASYSVVILAGISFAISTVYFACDELLFEPKE 277
           +KDI T++DPFD  TYNIP K VTF +GASYSV+IL G+  A +  Y    EL+FEPKE
Sbjct: 148 RKDISTVEDPFDAPTYNIPEKPVTFAEGASYSVIILVGLGIAAAAGYAVFKELIFEPKE 206


>dbj|BAK06193.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 282

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = +2

Query: 95  QHKKDIPTIDDPFDPLTYNIP*KAVTFVKGASYSVVILAGISFAISTVYFACDELLFEPK 274
           Q + D+ T++DPF+  TYNIP K VTFV+GASYSVVILAG+  A    Y    EL+FEPK
Sbjct: 114 QERTDLTTVEDPFNAPTYNIPEKPVTFVEGASYSVVILAGLGVAALAGYAVLKELIFEPK 173

Query: 275 E 277
           E
Sbjct: 174 E 174


Top