BLASTX nr result
ID: Cimicifuga21_contig00018718
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00018718 (456 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38550.3| unnamed protein product [Vitis vinifera] 93 3e-17 ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17 emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera] 93 3e-17 ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2... 89 3e-16 ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containi... 88 8e-16 >emb|CBI38550.3| unnamed protein product [Vitis vinifera] Length = 795 Score = 92.8 bits (229), Expect = 3e-17 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%) Frame = +2 Query: 2 VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMS- 178 + PNSSTYDILI G KLS Q + N+ L+ SY+AEAKRL +EM+E GF+PCE+TL C+S Sbjct: 712 IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771 Query: 179 SLARQGKRKKAKSLLKTLYKR 241 +LA+ GK+ A+ +L LYK+ Sbjct: 772 TLAKPGKKADAQRILNKLYKK 792 >ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Vitis vinifera] Length = 835 Score = 92.8 bits (229), Expect = 3e-17 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%) Frame = +2 Query: 2 VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMS- 178 + PNSSTYDILI G KLS Q + N+ L+ SY+AEAKRL +EM+E GF+PCE+TL C+S Sbjct: 712 IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771 Query: 179 SLARQGKRKKAKSLLKTLYKR 241 +LA+ GK+ A+ +L LYK+ Sbjct: 772 TLAKPGKKADAQRILNKLYKK 792 >emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera] Length = 882 Score = 92.8 bits (229), Expect = 3e-17 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%) Frame = +2 Query: 2 VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMS- 178 + PNSSTYDILI G KLS Q + N+ L+ SY+AEAKRL +EM+E GF+PCE+TL C+S Sbjct: 712 IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771 Query: 179 SLARQGKRKKAKSLLKTLYKR 241 +LA+ GK+ A+ +L LYK+ Sbjct: 772 TLAKPGKKADAQRILNKLYKK 792 >ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa] Length = 864 Score = 89.4 bits (220), Expect = 3e-16 Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Frame = +2 Query: 2 VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMSS 181 V PNSSTYDILI G C LS Q + +R+ + +YR EA+ L EM+E GFVPCE+TL C+SS Sbjct: 781 VPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISS 840 Query: 182 -LARQGKRKKAKSLLKTLYKRNK 247 AR G AK +LK +YKR + Sbjct: 841 TFARPGMVVDAKHMLKDMYKRKQ 863 >ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Cucumis sativus] Length = 683 Score = 87.8 bits (216), Expect = 8e-16 Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 1/84 (1%) Frame = +2 Query: 2 VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMSS 181 V+P +TYDILI G C L D L++SYRAEAKRL EM++ GFVPCEST C+SS Sbjct: 600 VSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISS 659 Query: 182 -LARQGKRKKAKSLLKTLYKRNKQ 250 A GK+ A+ LLK+ YKR ++ Sbjct: 660 TFAAPGKKADARMLLKSTYKRKRE 683