BLASTX nr result

ID: Cimicifuga21_contig00018718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018718
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38550.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]    93   3e-17
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16

>emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMS- 178
           + PNSSTYDILI G  KLS Q + N+ L+ SY+AEAKRL +EM+E GF+PCE+TL C+S 
Sbjct: 712 IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771

Query: 179 SLARQGKRKKAKSLLKTLYKR 241
           +LA+ GK+  A+ +L  LYK+
Sbjct: 772 TLAKPGKKADAQRILNKLYKK 792


>ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMS- 178
           + PNSSTYDILI G  KLS Q + N+ L+ SY+AEAKRL +EM+E GF+PCE+TL C+S 
Sbjct: 712 IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771

Query: 179 SLARQGKRKKAKSLLKTLYKR 241
           +LA+ GK+  A+ +L  LYK+
Sbjct: 772 TLAKPGKKADAQRILNKLYKK 792


>emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMS- 178
           + PNSSTYDILI G  KLS Q + N+ L+ SY+AEAKRL +EM+E GF+PCE+TL C+S 
Sbjct: 712 IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771

Query: 179 SLARQGKRKKAKSLLKTLYKR 241
           +LA+ GK+  A+ +L  LYK+
Sbjct: 772 TLAKPGKKADAQRILNKLYKK 792


>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
            predicted protein [Populus trichocarpa]
          Length = 864

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2    VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMSS 181
            V PNSSTYDILI G C LS Q + +R+ + +YR EA+ L  EM+E GFVPCE+TL C+SS
Sbjct: 781  VPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISS 840

Query: 182  -LARQGKRKKAKSLLKTLYKRNK 247
              AR G    AK +LK +YKR +
Sbjct: 841  TFARPGMVVDAKHMLKDMYKRKQ 863


>ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   VAPNSSTYDILIYGCCKLSNQVDTNRLLQLSYRAEAKRLLKEMDENGFVPCESTLDCMSS 181
           V+P  +TYDILI G C L    D    L++SYRAEAKRL  EM++ GFVPCEST  C+SS
Sbjct: 600 VSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISS 659

Query: 182 -LARQGKRKKAKSLLKTLYKRNKQ 250
             A  GK+  A+ LLK+ YKR ++
Sbjct: 660 TFAAPGKKADARMLLKSTYKRKRE 683