BLASTX nr result

ID: Cimicifuga21_contig00018706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018706
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134650.1| PREDICTED: uncharacterized protein LOC101212...    79   5e-13
ref|XP_002331997.1| predicted protein [Populus trichocarpa] gi|1...    72   1e-10
ref|XP_002277427.1| PREDICTED: uncharacterized protein LOC100243...    72   1e-10
ref|XP_003593909.1| hypothetical protein MTR_2g019240 [Medicago ...    70   4e-10
ref|NP_565793.1| uncharacterized protein [Arabidopsis thaliana] ...    69   7e-10

>ref|XP_004134650.1| PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
           gi|449519468|ref|XP_004166757.1| PREDICTED:
           uncharacterized protein LOC101224807 [Cucumis sativus]
          Length = 86

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
 Frame = -3

Query: 471 MGAITASVIAIAALVLGWITMEIACKPCLDKGRDAIDRSLXXXXXXXXXXNSIQAPLNP- 295
           MGAIT +VIAI A+V GWIT+EIACKPCL+KGR+AIDRSL          + I+APLNP 
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDFDPDDEVSDIRAPLNPN 60

Query: 294 ----PDAD 283
               PD D
Sbjct: 61  PNFTPDLD 68


>ref|XP_002331997.1| predicted protein [Populus trichocarpa] gi|118481900|gb|ABK92885.1|
           unknown [Populus trichocarpa]
           gi|222874765|gb|EEF11896.1| predicted protein [Populus
           trichocarpa]
          Length = 59

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = -3

Query: 471 MGAITASVIAIAALVLGWITMEIACKPCLDKGRDAIDRSLXXXXXXXXXXNSIQAPLNPP 292
           M A+T+++IAIA +VLGWI +EIACKPCL+KGR+AIDRSL          + I+ P+NPP
Sbjct: 1   MAAVTSALIAIAGVVLGWIAIEIACKPCLEKGREAIDRSL--NPDYDPDDDEIRVPINPP 58

Query: 291 D 289
           +
Sbjct: 59  N 59


>ref|XP_002277427.1| PREDICTED: uncharacterized protein LOC100243015 [Vitis vinifera]
          Length = 85

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = -3

Query: 471 MGAITASVIAIAALVLGWITMEIACKPCLDKGRDAIDRSL-XXXXXXXXXXNSIQAPLNP 295
           MG +T++VIAIA +VLGWIT+EIACKPCL++GR AIDRSL             I+APLNP
Sbjct: 1   MGGLTSAVIAIAGVVLGWITIEIACKPCLEQGRQAIDRSLNPDYDPDDDQNVDIRAPLNP 60


>ref|XP_003593909.1| hypothetical protein MTR_2g019240 [Medicago truncatula]
           gi|355482957|gb|AES64160.1| hypothetical protein
           MTR_2g019240 [Medicago truncatula]
          Length = 70

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = -3

Query: 471 MGAITASVIAIAALVLGWITMEIACKPCLDKGRDAIDRSL--XXXXXXXXXXNSIQAPLN 298
           MGAIT +VIA+  ++LGWIT+EIACKPCL++GR AIDR+L             +++APLN
Sbjct: 1   MGAITGAVIAVVGVILGWITIEIACKPCLEQGRQAIDRNLNPDYDPDDEDSAAAVRAPLN 60

Query: 297 P 295
           P
Sbjct: 61  P 61


>ref|NP_565793.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197084|gb|AAM14909.1| Expressed protein
           [Arabidopsis thaliana] gi|21554021|gb|AAM63102.1|
           unknown [Arabidopsis thaliana]
           gi|51968766|dbj|BAD43075.1| hypothetical protein
           [Arabidopsis thaliana] gi|51970512|dbj|BAD43948.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51970622|dbj|BAD44003.1| hypothetical protein
           [Arabidopsis thaliana] gi|51971725|dbj|BAD44527.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51971883|dbj|BAD44606.1| hypothetical protein
           [Arabidopsis thaliana] gi|51971887|dbj|BAD44608.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|88010859|gb|ABD38864.1| At2g34585 [Arabidopsis
           thaliana] gi|330253901|gb|AEC08995.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 81

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
 Frame = -3

Query: 471 MGAITASVIAIAALVLGWITMEIACKPCLDKGRDAIDRSL----XXXXXXXXXXNSIQAP 304
           M AIT++VIAIA ++LGWIT+E+ACKPCL+ GR+AIDRSL              + ++AP
Sbjct: 1   MAAITSAVIAIAGIILGWITIELACKPCLESGREAIDRSLNPDYDPDDQDVDSSSDVRAP 60

Query: 303 L---NPPDADD 280
           L   +PPD  D
Sbjct: 61  LIPNHPPDNSD 71


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