BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018694
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   405   e-110
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   390   e-106
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   384   e-104
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   362   2e-97

>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  405 bits (1040), Expect = e-110
 Identities = 208/379 (54%), Positives = 263/379 (69%), Gaps = 5/379 (1%)
 Frame = -3

Query: 1400 LNFSIDGLDDPVLGKWLSANGSVISVDVASGKAHAVGEGATQVIFEGPSXXXXXXXXXXX 1221
            LN SI GL D + G+W + NGSVISVD  SG A A+GEG+ QV F               
Sbjct: 1603 LNLSIKGLSDTISGQWFTTNGSVISVDTLSGMAKAIGEGSAQVSFHYGRLRLQTTITVLK 1662

Query: 1220 XXXXXXDSPTETLTNVPYPTKGYYFSVIFSDS-SRKFESKGVLFDCRVDPPFVGYAKPWK 1044
                  ++P ETLTNVPYP+KGY FSV FS+S     E K +LF+CRVDP FVGY KPW 
Sbjct: 1663 GNYIFVNAPKETLTNVPYPSKGYNFSVKFSESLGAPGEKKRILFNCRVDPLFVGYVKPWL 1722

Query: 1043 DLDTGNSYCLFFPYSPEHLAHSIPKLKATRPDISVSITASRREEEHVTGSSTALFVGGFT 864
            D D+GNSYCLFFPYSPEHL HS+PKL+  RPD+S+SI+AS  E EHV+GS++ALF+GGF+
Sbjct: 1723 DQDSGNSYCLFFPYSPEHLVHSVPKLEGMRPDVSLSISASL-EHEHVSGSASALFIGGFS 1781

Query: 863  ILNTSKDLMQLNLTPESNKSIITVVGNTDVEVHWKNRDLILVSTIRRNDFGIGGDVEYEV 684
            I+  SK    LNLTP SNK+ ITV+GNTDVE+HW +RDLI++S I + DFGI G   YEV
Sbjct: 1782 IMEMSK----LNLTPGSNKTCITVLGNTDVEIHWHHRDLIMISLIHKEDFGIRGFARYEV 1837

Query: 683  KAIKAERFKDKILFVLPATGQRVEIDVNYEPAKSVLTSKAAGVA-WILICTIFSLLVAAF 507
            K +KA+RFKD+I+  LPA GQ VEID+N+EP ++  +S     A W  I     LL+ + 
Sbjct: 1838 KLLKAKRFKDRIIITLPANGQSVEIDINHEPEETASSSVTINKAFWASILGYLLLLILSI 1897

Query: 506  YLWKRLGDTEDTSR---ASIPATPSIAGPVTPNRNSSPGQNLQHSPRTPQPFIEYVRRTI 336
             +  R  D  + S+   +S+  TPSIA P TP+R++        SPRTPQPF++YVR+TI
Sbjct: 1898 AIITRFLDRPERSQQTSSSVTTTPSIAAPTTPDRSTPSSVVNDSSPRTPQPFVDYVRKTI 1957

Query: 335  DETPYYKRDGRQRVNPQNT 279
            DETPYYKR+GR+R+NPQNT
Sbjct: 1958 DETPYYKREGRRRINPQNT 1976


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  405 bits (1040), Expect = e-110
 Identities = 218/385 (56%), Positives = 264/385 (68%), Gaps = 10/385 (2%)
 Frame = -3

Query: 1400 LNFSIDGLDDPVLGKWLSANGSVISVDVASGKAHAVGEGATQVIFEGPSXXXXXXXXXXX 1221
            LNFSI+GL D V G+WLS N SVIS+DV SG+A AVGEG TQV FE  S           
Sbjct: 1584 LNFSIEGLKDKVSGQWLSGNESVISLDVLSGEAQAVGEGTTQVFFECSSLKLQTTVTVQK 1643

Query: 1220 XXXXXXDSPTETLTNVPYPTKGYYFSVIFSDSSRKFESKG------VLFDCRVDPPFVGY 1059
                  D+P ETLTN P P KGY FSV FS  +   + +G      VLFDCRVDPPFVGY
Sbjct: 1644 GKIVLVDAPMETLTNAPIPAKGYNFSVKFSSDTYGHDLEGFRNDMGVLFDCRVDPPFVGY 1703

Query: 1058 AKPWKDLDTGNSYCLFFPYSPEHLAHSIPKLKATRPDISVSITASRREEEHVTGSSTALF 879
            AKPW+D  TG SYCLFFPYSPEHLA S+PK K  RP IS+SI+AS +E  HV+GS++ALF
Sbjct: 1704 AKPWRDFGTGKSYCLFFPYSPEHLARSVPKSKDMRPYISLSISASVQETNHVSGSASALF 1763

Query: 878  VGGFTILNTSKDLMQLNLTPESNKSIITVVGNTDVEVHWKNRDLILVSTIRRNDFGIGGD 699
            VGGF+IL   K    LNLT  SNK+IIT++GNTDV++HW  RD I++S + + DFGIGG 
Sbjct: 1764 VGGFSILEMGK----LNLTAGSNKTIITILGNTDVDIHWHERDSIMISPVHKEDFGIGGL 1819

Query: 698  VEYEVKAIKAERFKDKILFVLPATGQRVEIDVNYEP---AKSVLTSKAAGVAWILICTIF 528
             +YEVK ++A++FKDK++  LPA GQRVE+DV+Y+P   A SV T K    A ++ C   
Sbjct: 1820 AKYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAYSVSTVKVTLWAGVVGCIAL 1879

Query: 527  SLLVAAFYLWKRLGDTEDTSRAS-IPATPSIAGPVTPNRNSSPGQNLQHSPRTPQPFIEY 351
             LL  A +++    D  D +R S  PA  SI  P TP+R S   QN   SPRTPQPF+EY
Sbjct: 1880 LLLTLAIFIF--FLDRPDRARPSNPPANSSIVAPTTPDRRSPAVQN-DSSPRTPQPFVEY 1936

Query: 350  VRRTIDETPYYKRDGRQRVNPQNTY 276
            VRRTI ETPYY R+GR+RVNPQNTY
Sbjct: 1937 VRRTIHETPYYTREGRRRVNPQNTY 1961


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  390 bits (1003), Expect = e-106
 Identities = 213/377 (56%), Positives = 257/377 (68%), Gaps = 9/377 (2%)
 Frame = -3

Query: 1400 LNFSIDGLDDPVLGKWLSANGSVISVDVASGKAHAVGEGATQVIFEGPSXXXXXXXXXXX 1221
            LNFSI+GL D V G+WLS N SVIS+DV SG+A AVGEG TQV FE  S           
Sbjct: 1659 LNFSIEGLKDKVSGQWLSGNESVISLDVLSGEAQAVGEGTTQVFFECSSLKLQTTVTVQK 1718

Query: 1220 XXXXXXDSPTETLTNVPYPTKGYYFSVIFSDS-SRKFES----KGVLFDCRVDPPFVGYA 1056
                  D+P ETLTN P P KGY FSV FSD+     E      GVLFDCRVDPPFVGYA
Sbjct: 1719 GKIVLVDAPMETLTNAPIPAKGYNFSVKFSDTYGHDLEGFRNDMGVLFDCRVDPPFVGYA 1778

Query: 1055 KPWKDLDTGNSYCLFFPYSPEHLAHSIPKLKATRPDISVSITASRREEEHVTGSSTALFV 876
            KPW+D  TG SYCLFFPYSPEHLA S+PK K  RP IS+SI+AS +E  HV+GS++ALFV
Sbjct: 1779 KPWRDFGTGKSYCLFFPYSPEHLARSVPKSKDMRPYISLSISASVQETNHVSGSASALFV 1838

Query: 875  GGFTILNTSKDLMQLNLTPESNKSIITVVGNTDVEVHWKNRDLILVSTIRRNDFGIGGDV 696
            GGF+IL   K    LNLT  SNK+IIT++GNTDV++HW  RD I++S + + DFGIGG  
Sbjct: 1839 GGFSILEMGK----LNLTAGSNKTIITILGNTDVDIHWHERDSIMISPVHKEDFGIGGLA 1894

Query: 695  EYEVKAIKAERFKDKILFVLPATGQRVEIDVNYEP---AKSVLTSKAAGVAWILICTIFS 525
            +YEVK ++A++FKDK++  LPA GQRVE+DV+Y+P   A SV T K    A ++ C    
Sbjct: 1895 KYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAYSVSTVKVTLWAGVVGCIALL 1954

Query: 524  LLVAAFYLWKRLGDTEDTSRAS-IPATPSIAGPVTPNRNSSPGQNLQHSPRTPQPFIEYV 348
            LL  A +++    D  D +R S  PA  SI  P TP+R S   QN   SPRTPQPF+EYV
Sbjct: 1955 LLTLAIFIF--FLDRPDRARPSNPPANSSIVAPTTPDRRSPAVQN-DSSPRTPQPFVEYV 2011

Query: 347  RRTIDETPYYKRDGRQR 297
            RRTI ETPYY R+GR+R
Sbjct: 2012 RRTIHETPYYTREGRRR 2028


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  384 bits (987), Expect = e-104
 Identities = 206/374 (55%), Positives = 260/374 (69%), Gaps = 6/374 (1%)
 Frame = -3

Query: 1400 LNFSIDGLDDPVLGKWLSANGSVISVDVASGKAHAVGEGATQVIFEGPSXXXXXXXXXXX 1221
            L+FSI+G    V G WLSAN SVIS+D+ SGKA A G G+TQVIFE PS           
Sbjct: 1562 LHFSIEG--SQVSGHWLSANESVISIDMPSGKAKAAGIGSTQVIFESPSMKLQTTVTVVS 1619

Query: 1220 XXXXXXDSPTETLTNVPYPTKGYYFSVIFSDSSRKFE----SKGVLFDCRVDPPFVGYAK 1053
                  D+P ETLTNVPYPTKGY FSV FSD+  KF     SK + +DC+VDPPFVGYAK
Sbjct: 1620 GNIVSVDAPKETLTNVPYPTKGYSFSVKFSDTCNKFNAVGNSKEISYDCKVDPPFVGYAK 1679

Query: 1052 PWKDLDTGNSYCLFFPYSPEHLAHSIPKLKATRPDISVSITASRREEEHVTGSSTALFVG 873
            PW +L+TGNSYCLFFPYSPEHL  SIP+LK  RP ISVSI AS RE  H++GS++ALF+G
Sbjct: 1680 PWMNLETGNSYCLFFPYSPEHLVRSIPRLKDMRPYISVSINASLREASHISGSASALFIG 1739

Query: 872  GFTILNTSKDLMQLNLTPESNKSIITVVGNTDVEVHWKNRDLILVSTIRRNDFGIGGDVE 693
            GF+IL   K    LNLTPESNKS++T++GN+DV++ W +RD+I +  + R D GIG   +
Sbjct: 1740 GFSILEMDK----LNLTPESNKSVLTILGNSDVDIQWHSRDVINIIPVHREDLGIGSRTQ 1795

Query: 692  YEVKAIKAERFKDKILFVLPATGQRVEIDVNYEP-AKSVLTSKAAGVAWILICTIFSLLV 516
            YEVK ++ +RFKDKI+  LPA GQRVEIDVNYEP A++V  +   G     I   F  ++
Sbjct: 1796 YEVKVLRPKRFKDKIIITLPANGQRVEIDVNYEPDARAVPKTIFKGAFLPTIVACFGAVL 1855

Query: 515  AAFYLWKRLGDTEDTSRASIP-ATPSIAGPVTPNRNSSPGQNLQHSPRTPQPFIEYVRRT 339
               ++++ L    + +R+    AT +I  P TP R SSP  + Q SPRTPQPF++YVRRT
Sbjct: 1856 GIIFVFQNLFRMPNRTRSHTSLATQNITAPHTPER-SSPVLSDQ-SPRTPQPFVDYVRRT 1913

Query: 338  IDETPYYKRDGRQR 297
            IDETP+YKR+ R+R
Sbjct: 1914 IDETPFYKREARRR 1927


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  362 bits (928), Expect = 2e-97
 Identities = 196/381 (51%), Positives = 247/381 (64%), Gaps = 11/381 (2%)
 Frame = -3

Query: 1400 LNFSIDGLDDPVLGKWLSANGSVISVDVASGKAHAVGEGATQVIFEGPSXXXXXXXXXXX 1221
            LNFSI G      G+W+S N SV+SVD+ SG A AVG G+T+V+FEG +           
Sbjct: 1543 LNFSIKG--SQFSGRWISTNESVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTVIVQT 1600

Query: 1220 XXXXXXDSPTETLTNVPYPTKGYYFSVIFSDSSRKFES-KGVLFDCRVDPPFVGYAKPWK 1044
                   +P E LTNVP+P KGY FSV FS  S    + K VL DCRVDPPFVGYAKPW 
Sbjct: 1601 GHTLSVVAPVEFLTNVPFPAKGYNFSVNFSGQSGALPNDKRVLHDCRVDPPFVGYAKPWL 1660

Query: 1043 DLDTGNSYCLFFPYSPEHLAHSIPKLKATRPDISVSITASRREEEHVTGSSTALFVGGFT 864
            DLD  NSYCLFFPYSPEHLA S  K KA RPDISV+I AS RE   + GS++ALFVGGF+
Sbjct: 1661 DLDYDNSYCLFFPYSPEHLARSATKSKAMRPDISVTIYASSRESSQIFGSASALFVGGFS 1720

Query: 863  ILNTSK-DLMQLNLTPESNKSIITVVGNTDVEVHWKNRDLILVSTIRRNDFGIGGDVEYE 687
            ++   K    QL LTP+SNK+ IT++GNTDVE+HW  RDL++V  I + +  +GG  EYE
Sbjct: 1721 VMEMDKVSATQLILTPDSNKTAITILGNTDVELHWHERDLVIVGPISKEESRVGGRAEYE 1780

Query: 686  VKAIKAERFKDKILFVLPATGQRVEIDVNYEPAKSVLTSKA--AGVAWILICTIFSLLVA 513
            VKA+  +RF+DKIL  L A GQR EIDV Y+P +   +         W  +    SLL+ 
Sbjct: 1781 VKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEASETVFDTTTIWATVLGSLSLLIL 1840

Query: 512  AFYLWKRLGDTEDTSRASIPA-------TPSIAGPVTPNRNSSPGQNLQHSPRTPQPFIE 354
               L+    D  + ++ S P+       TP++A P TP+R SSP  + + SPRTPQPF++
Sbjct: 1841 TITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDR-SSPVISNEQSPRTPQPFVD 1899

Query: 353  YVRRTIDETPYYKRDGRQRVN 291
            YVR+TIDETPYYKR+GR+R N
Sbjct: 1900 YVRQTIDETPYYKREGRRRFN 1920