BLASTX nr result

ID: Cimicifuga21_contig00018662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018662
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002512527.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_003555797.1| PREDICTED: uncharacterized protein LOC100806...    74   9e-12
ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago ...    69   4e-10

>ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|222871454|gb|EEF08585.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 11/97 (11%)
 Frame = -3

Query: 429 MGRAWSSSAFR-WXXXXXXXXXS--------IFRWPEMDFSII--TSWWAGPQSFRWWPE 283
           M   WS+S FR W         S        + RWP    +    + WWA P+  RW PE
Sbjct: 1   MAGRWSTSTFRQWLGLDVAYTTSSIWASSISVLRWPSQLRTTTNPSRWWAPPRMMRW-PE 59

Query: 282 IDFSIVDSMIWSLITVFESLALVSMLCFYFVFCGCTL 172
           +DFSI+D ++WSL+T FES+ALVSML F+F+FCGCT+
Sbjct: 60  LDFSILDDVVWSLVTAFESVALVSMLAFFFLFCGCTV 96


>ref|XP_002512527.1| conserved hypothetical protein [Ricinus communis]
           gi|223548488|gb|EEF49979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
 Frame = -3

Query: 429 MGRAWSSSAFRWXXXXXXXXXSIFRWPEMDFSIITSWWAGPQSFRWWPEID--FSIVDSM 256
           M   WS+SA RW          + RWP+     ++S +  P+    WPE++  FSIVD +
Sbjct: 1   MAGRWSTSALRWLGVDTAYS--LLRWPQF----MSSSYLSPR----WPELNLNFSIVDDV 50

Query: 255 IWSLITVFESLALVSMLCFYFVFCGCTL 172
           +W LIT FES+ALVSMLCF+F+FCGCT+
Sbjct: 51  VWGLITAFESVALVSMLCFFFLFCGCTI 78


>ref|XP_003555797.1| PREDICTED: uncharacterized protein LOC100806666 [Glycine max]
           gi|255646885|gb|ACU23912.1| unknown [Glycine max]
          Length = 77

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 10/72 (13%)
 Frame = -3

Query: 360 FRW-PEMDFSIITSW---------WAGPQSFRWWPEIDFSIVDSMIWSLITVFESLALVS 211
           FRW P  D S ++SW         W+  +  RW   +  SIVD ++W ++T FES+ALVS
Sbjct: 5   FRWGPMWDLSTVSSWPLASYISPRWSPRRLLRWSGMMSVSIVDELVWRVVTAFESVALVS 64

Query: 210 MLCFYFVFCGCT 175
           MLCF+F+FCGCT
Sbjct: 65  MLCFFFLFCGCT 76


>ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -3

Query: 417 WSSSAFRWXXXXXXXXXS-IFRWPEMDFSIITSWWAGPQSFRWWPEIDFSIVDSMIWSLI 241
           W  S FRW         S I RWPE DFS  T+     +S RW   +DF+I D ++W+ +
Sbjct: 5   WYPSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLT-LESLRW---LDFAI-DDVLWTFV 59

Query: 240 TVFESLALVSMLCFYFVFCGCTL 172
           T  ES+AL +MLC++FVFCGCTL
Sbjct: 60  TALESVALTAMLCYFFVFCGCTL 82


>ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago truncatula]
           gi|124361120|gb|ABN09092.1| hypothetical protein
           MtrDRAFT_AC173289g24v1 [Medicago truncatula]
           gi|355483747|gb|AES64950.1| hypothetical protein
           MTR_2g033600 [Medicago truncatula]
          Length = 85

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
 Frame = -3

Query: 429 MGRAW--SSSAFRWXXXXXXXXXSIFRWPEMDFSIITSWWAGPQSF-----RWWPEIDFS 271
           MG  W    S FRW         S+FRWP ++ S    +W   +SF     RW    +F 
Sbjct: 1   MGTRWLRGMSIFRWPELDLSFPWSVFRWPALNLS----YWNVGRSFQETLLRW----NFW 52

Query: 270 IVDSMIWSLITVFESLALVSMLCFYFVFCGCTL 172
           +VD ++W L+   ESLAL+S++C+YF+ CGCTL
Sbjct: 53  LVDDVLWELVRCIESLALLSIICYYFLCCGCTL 85


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