BLASTX nr result
ID: Cimicifuga21_contig00018654
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018654
(1678 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321123.1| glutamate-gated kainate-type ion channel rec... 671 0.0
ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Viti... 668 0.0
emb|CBI28943.3| unnamed protein product [Vitis vinifera] 668 0.0
ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu... 658 0.0
ref|XP_002301627.1| glutamate-gated kainate-type ion channel rec... 657 0.0
>ref|XP_002321123.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222861896|gb|EEE99438.1|
glutamate-gated kainate-type ion channel receptor subunit
GluR5 [Populus trichocarpa]
Length = 927
Score = 671 bits (1732), Expect = 0.0
Identities = 338/487 (69%), Positives = 388/487 (79%)
Frame = -2
Query: 1677 NRNIGYWSNYSGLSVVSPEILYEKPPNTSTSNHKLYSVIWPGETIAQPRGWVFPNNGQNL 1498
+R IGYWSNYSGLS +SPE+LY KP N S+SN L SVIWPGET PRGWVFP NG+ L
Sbjct: 407 SRRIGYWSNYSGLSTISPEVLYTKPRNNSSSNQHLSSVIWPGETSLVPRGWVFPENGKPL 466
Query: 1497 RIGVPYRATYKQFVSKGSGPEEAQGFCIDVFEAAVALLPYGVPHSYILHGDGIRNPTYDT 1318
RI VP R +Y+QFV+K P +G+CIDVFEAA+ LLPY VP +Y+LHGDG RNP Y+
Sbjct: 467 RIAVPNRISYQQFVAKDKNPPGVRGYCIDVFEAAINLLPYPVPRTYMLHGDGKRNPEYNE 526
Query: 1317 LVEMVADNKYDAAVGDVTIVTNRTRIVDFTQPYIGSGLVVVAPVKQVKSNAWAFLKPFTI 1138
+V+ VA ++YDAAVGDVTIVTNRT+IVDFTQP++ SGLVVVAPVK+ KS+ WAFLKPFTI
Sbjct: 527 IVQAVAQDRYDAAVGDVTIVTNRTKIVDFTQPFMESGLVVVAPVKEQKSSPWAFLKPFTI 586
Query: 1137 EMWVVTGAFFLFVGAVVWILEHRMNKEFRGPPSQQLITVFWFSFSTMFFSHRENTVSTLG 958
+MW+VTGAFFLFVGAVVWILEHRMN+EFRGPPSQQ++T+FWFSFSTMFFSHRENTVSTLG
Sbjct: 587 QMWLVTGAFFLFVGAVVWILEHRMNREFRGPPSQQIMTIFWFSFSTMFFSHRENTVSTLG 646
Query: 957 RXXXXXXXXXXXXINSSYTASLTSILTVQQLSSRIEGIDSLISSNERIGIQDGSFAKNYL 778
R INSSYTASLTSILTVQQL+SRIEGIDSL+SSNE IGIQDGSFA+NYL
Sbjct: 647 RFVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDSLVSSNEPIGIQDGSFARNYL 706
Query: 777 IQELNVAESRIISLKSQDEYVNALKLGSAGGGVAAIVDELPYIEVFMSYTKCEFKTVGPE 598
+ ELN+A SR++ LKSQ EY AL+LG GGVAAIVDELPYIE+F+S T C+F+TVG E
Sbjct: 707 MDELNIAGSRLVILKSQQEYSTALQLGPKNGGVAAIVDELPYIELFLSSTSCKFRTVGQE 766
Query: 597 FTKSGWGFAFQRDSPLATDLSTAILQLSENGDLQKIHDKWLSLAGCSTQGNELIDANRLS 418
FTKSGWGFAFQRDSPLA DLSTAILQLSENGDLQKIH+KWL+ C Q NE ID +RLS
Sbjct: 767 FTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHNKWLTHGDCMEQINE-IDDSRLS 825
Query: 417 LKSFWGLFLICGVACFCALLXXXXXXXXXXXRYSTHVQEEVEVPEIGXXXXXXXXXRATS 238
L SFWGLFLICG++CF AL R++ EE EV EI +TS
Sbjct: 826 LTSFWGLFLICGISCFIALTTFCCKVIFQFRRFTPEGGEEAEVDEI-QPGRPRRSLHSTS 884
Query: 237 FKGLLDF 217
FK L+DF
Sbjct: 885 FKDLIDF 891
>ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Vitis vinifera]
Length = 911
Score = 668 bits (1724), Expect = 0.0
Identities = 325/459 (70%), Positives = 380/459 (82%)
Frame = -2
Query: 1674 RNIGYWSNYSGLSVVSPEILYEKPPNTSTSNHKLYSVIWPGETIAQPRGWVFPNNGQNLR 1495
R IGYWSNYSGLSV++PEILY +PPNTS+SNH LYSVIWPGE A+PRGWVFPNNG+ LR
Sbjct: 409 RRIGYWSNYSGLSVITPEILYTRPPNTSSSNHHLYSVIWPGEITAKPRGWVFPNNGKPLR 468
Query: 1494 IGVPYRATYKQFVSKGSGPEEAQGFCIDVFEAAVALLPYGVPHSYILHGDGIRNPTYDTL 1315
IGVP R ++K FV++ GP +G+CID+FEAAV LLPY VPH+Y+L+G+G+RNP+YD L
Sbjct: 469 IGVPDRVSFKDFVARDKGPLGVRGYCIDIFEAAVNLLPYAVPHTYMLYGNGLRNPSYDDL 528
Query: 1314 VEMVADNKYDAAVGDVTIVTNRTRIVDFTQPYIGSGLVVVAPVKQVKSNAWAFLKPFTIE 1135
V V NK+DAAVGD+TIVTNRTRIVDFTQP++ SGLV+VA VK+ KS+ WAFLKPFT++
Sbjct: 529 VSQVVGNKFDAAVGDITIVTNRTRIVDFTQPFMESGLVIVATVKETKSSPWAFLKPFTVQ 588
Query: 1134 MWVVTGAFFLFVGAVVWILEHRMNKEFRGPPSQQLITVFWFSFSTMFFSHRENTVSTLGR 955
MW VTGAFF+FVGAVVWILEHR+N+EFRGPPSQQLIT+FWFSFSTMFFSHRENTVSTLGR
Sbjct: 589 MWCVTGAFFIFVGAVVWILEHRINQEFRGPPSQQLITIFWFSFSTMFFSHRENTVSTLGR 648
Query: 954 XXXXXXXXXXXXINSSYTASLTSILTVQQLSSRIEGIDSLISSNERIGIQDGSFAKNYLI 775
INSSYTASLTSILTVQQL+SRIEGIDSLISSN++IG+QDGSFA NYLI
Sbjct: 649 LVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDSLISSNDKIGVQDGSFAWNYLI 708
Query: 774 QELNVAESRIISLKSQDEYVNALKLGSAGGGVAAIVDELPYIEVFMSYTKCEFKTVGPEF 595
+ELN+ SR++ LK Q+EY +AL+LG GGVAAIVDELPYI+VF++ C F+ VG EF
Sbjct: 709 EELNIPVSRLVHLKDQEEYADALRLGPKEGGVAAIVDELPYIQVFLAKLNCAFRIVGQEF 768
Query: 594 TKSGWGFAFQRDSPLATDLSTAILQLSENGDLQKIHDKWLSLAGCSTQGNELIDANRLSL 415
TKSGWGFAFQRDSPLA DLSTAILQLSENG+LQ+IHDKWLS CS+Q ++ +D NRLSL
Sbjct: 769 TKSGWGFAFQRDSPLAVDLSTAILQLSENGELQRIHDKWLSNKECSSQLSQ-VDENRLSL 827
Query: 414 KSFWGLFLICGVACFCALLXXXXXXXXXXXRYSTHVQEE 298
SFWGLFLI G+ACF AL RY +EE
Sbjct: 828 SSFWGLFLISGIACFVALTVFFFRTFCQYRRYGPEEKEE 866
>emb|CBI28943.3| unnamed protein product [Vitis vinifera]
Length = 1255
Score = 668 bits (1724), Expect = 0.0
Identities = 325/459 (70%), Positives = 380/459 (82%)
Frame = -2
Query: 1674 RNIGYWSNYSGLSVVSPEILYEKPPNTSTSNHKLYSVIWPGETIAQPRGWVFPNNGQNLR 1495
R IGYWSNYSGLSV++PEILY +PPNTS+SNH LYSVIWPGE A+PRGWVFPNNG+ LR
Sbjct: 422 RRIGYWSNYSGLSVITPEILYTRPPNTSSSNHHLYSVIWPGEITAKPRGWVFPNNGKPLR 481
Query: 1494 IGVPYRATYKQFVSKGSGPEEAQGFCIDVFEAAVALLPYGVPHSYILHGDGIRNPTYDTL 1315
IGVP R ++K FV++ GP +G+CID+FEAAV LLPY VPH+Y+L+G+G+RNP+YD L
Sbjct: 482 IGVPDRVSFKDFVARDKGPLGVRGYCIDIFEAAVNLLPYAVPHTYMLYGNGLRNPSYDDL 541
Query: 1314 VEMVADNKYDAAVGDVTIVTNRTRIVDFTQPYIGSGLVVVAPVKQVKSNAWAFLKPFTIE 1135
V V NK+DAAVGD+TIVTNRTRIVDFTQP++ SGLV+VA VK+ KS+ WAFLKPFT++
Sbjct: 542 VSQVVGNKFDAAVGDITIVTNRTRIVDFTQPFMESGLVIVATVKETKSSPWAFLKPFTVQ 601
Query: 1134 MWVVTGAFFLFVGAVVWILEHRMNKEFRGPPSQQLITVFWFSFSTMFFSHRENTVSTLGR 955
MW VTGAFF+FVGAVVWILEHR+N+EFRGPPSQQLIT+FWFSFSTMFFSHRENTVSTLGR
Sbjct: 602 MWCVTGAFFIFVGAVVWILEHRINQEFRGPPSQQLITIFWFSFSTMFFSHRENTVSTLGR 661
Query: 954 XXXXXXXXXXXXINSSYTASLTSILTVQQLSSRIEGIDSLISSNERIGIQDGSFAKNYLI 775
INSSYTASLTSILTVQQL+SRIEGIDSLISSN++IG+QDGSFA NYLI
Sbjct: 662 LVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDSLISSNDKIGVQDGSFAWNYLI 721
Query: 774 QELNVAESRIISLKSQDEYVNALKLGSAGGGVAAIVDELPYIEVFMSYTKCEFKTVGPEF 595
+ELN+ SR++ LK Q+EY +AL+LG GGVAAIVDELPYI+VF++ C F+ VG EF
Sbjct: 722 EELNIPVSRLVHLKDQEEYADALRLGPKEGGVAAIVDELPYIQVFLAKLNCAFRIVGQEF 781
Query: 594 TKSGWGFAFQRDSPLATDLSTAILQLSENGDLQKIHDKWLSLAGCSTQGNELIDANRLSL 415
TKSGWGFAFQRDSPLA DLSTAILQLSENG+LQ+IHDKWLS CS+Q ++ +D NRLSL
Sbjct: 782 TKSGWGFAFQRDSPLAVDLSTAILQLSENGELQRIHDKWLSNKECSSQLSQ-VDENRLSL 840
Query: 414 KSFWGLFLICGVACFCALLXXXXXXXXXXXRYSTHVQEE 298
SFWGLFLI G+ACF AL RY +EE
Sbjct: 841 SSFWGLFLISGIACFVALTVFFFRTFCQYRRYGPEEKEE 879
>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
putative [Ricinus communis]
Length = 938
Score = 658 bits (1697), Expect = 0.0
Identities = 332/487 (68%), Positives = 381/487 (78%)
Frame = -2
Query: 1677 NRNIGYWSNYSGLSVVSPEILYEKPPNTSTSNHKLYSVIWPGETIAQPRGWVFPNNGQNL 1498
+R IGYWSNYSGLS+VSPE LYEKPPN S SN LY+VIWPGE+ PRGWVFPNNG+ L
Sbjct: 417 SRRIGYWSNYSGLSIVSPETLYEKPPNNSNSNQHLYTVIWPGESTKIPRGWVFPNNGKPL 476
Query: 1497 RIGVPYRATYKQFVSKGSGPEEAQGFCIDVFEAAVALLPYGVPHSYILHGDGIRNPTYDT 1318
RI VP R +YK+FV+K P +G+CIDVFEAA+ LLPY VP +Y+L+G+G NP Y+
Sbjct: 477 RIAVPNRVSYKEFVAKDKNPPGVRGYCIDVFEAAINLLPYPVPRAYMLYGNGKDNPVYNE 536
Query: 1317 LVEMVADNKYDAAVGDVTIVTNRTRIVDFTQPYIGSGLVVVAPVKQVKSNAWAFLKPFTI 1138
L+ VA +KYDA VGDVTI+TNRTRIVDFTQPY+ SGLVVVAPVK+ KS WAFLKPFT+
Sbjct: 537 LINAVAQDKYDAVVGDVTIITNRTRIVDFTQPYMESGLVVVAPVKEQKSRPWAFLKPFTV 596
Query: 1137 EMWVVTGAFFLFVGAVVWILEHRMNKEFRGPPSQQLITVFWFSFSTMFFSHRENTVSTLG 958
MW VT AFFLFVGAVVWILEHR+N EFRGPP QQLIT+FWFSFSTMFFSHRENTVS LG
Sbjct: 597 SMWGVTAAFFLFVGAVVWILEHRINHEFRGPPRQQLITIFWFSFSTMFFSHRENTVSALG 656
Query: 957 RXXXXXXXXXXXXINSSYTASLTSILTVQQLSSRIEGIDSLISSNERIGIQDGSFAKNYL 778
R INSSYTASLTSILTVQQL+SRIEGIDSLISS E IG+Q+GSFA NYL
Sbjct: 657 RFVLLIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDSLISSTEPIGVQEGSFALNYL 716
Query: 777 IQELNVAESRIISLKSQDEYVNALKLGSAGGGVAAIVDELPYIEVFMSYTKCEFKTVGPE 598
+ ELN+A+SR++ L++Q+ Y+ AL+ G GGGVAAIVDELPY+E+F+S T C F+TVG E
Sbjct: 717 VDELNIAQSRLVILRNQEHYLTALQRGPKGGGVAAIVDELPYVELFLSNTNCAFRTVGQE 776
Query: 597 FTKSGWGFAFQRDSPLATDLSTAILQLSENGDLQKIHDKWLSLAGCSTQGNELIDANRLS 418
FTKSGWGFAFQRDSPLA DLSTAILQLSENGDLQKIH+KWL+ CS Q + +DA+RLS
Sbjct: 777 FTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTRTECSMQIGQ-VDADRLS 835
Query: 417 LKSFWGLFLICGVACFCALLXXXXXXXXXXXRYSTHVQEEVEVPEIGXXXXXXXXXRATS 238
L SFWGLFLICG+AC AL R+S EE EV EI R+TS
Sbjct: 836 LSSFWGLFLICGLACCIALTLFFCRVFGQFRRFSPEEVEEREVEEI-EPARPRRSLRSTS 894
Query: 237 FKGLLDF 217
FK LLDF
Sbjct: 895 FKDLLDF 901
>ref|XP_002301627.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222843353|gb|EEE80900.1|
glutamate-gated kainate-type ion channel receptor subunit
GluR5 [Populus trichocarpa]
Length = 956
Score = 657 bits (1695), Expect = 0.0
Identities = 331/487 (67%), Positives = 382/487 (78%)
Frame = -2
Query: 1677 NRNIGYWSNYSGLSVVSPEILYEKPPNTSTSNHKLYSVIWPGETIAQPRGWVFPNNGQNL 1498
+R IGYWS+YSGLS V+PE+LY KP NTS S+ LYS IWPGET PRGWVFP NG+ L
Sbjct: 437 SRRIGYWSDYSGLSTVTPEVLYTKPKNTSASSQHLYSAIWPGETSLVPRGWVFPENGKPL 496
Query: 1497 RIGVPYRATYKQFVSKGSGPEEAQGFCIDVFEAAVALLPYGVPHSYILHGDGIRNPTYDT 1318
RI VP R +Y QFVSK P +G+CIDVFEAA+ LLPY VPH Y+LHG+G RNP Y+
Sbjct: 497 RIAVPNRISYVQFVSKDRNPPGVRGYCIDVFEAAINLLPYPVPHMYVLHGNGKRNPVYNE 556
Query: 1317 LVEMVADNKYDAAVGDVTIVTNRTRIVDFTQPYIGSGLVVVAPVKQVKSNAWAFLKPFTI 1138
+V+ VA+++YDAAVGDVTIVTNRT+IVDFTQP++ SGLVVVAPVK+V+S+ WAFLKPFT
Sbjct: 557 IVQAVAEDRYDAAVGDVTIVTNRTKIVDFTQPFMESGLVVVAPVKEVQSSPWAFLKPFTF 616
Query: 1137 EMWVVTGAFFLFVGAVVWILEHRMNKEFRGPPSQQLITVFWFSFSTMFFSHRENTVSTLG 958
+MW+VTGAFFL VGAVVWILEHR+N EFRG P QQL+T+FWFSFSTMFFSHRENT+STLG
Sbjct: 617 QMWLVTGAFFLLVGAVVWILEHRINHEFRGSPRQQLMTIFWFSFSTMFFSHRENTLSTLG 676
Query: 957 RXXXXXXXXXXXXINSSYTASLTSILTVQQLSSRIEGIDSLISSNERIGIQDGSFAKNYL 778
R INSSYTASLTSILTVQQL+SRIEGIDSL + NE IG+QDGSFA+NYL
Sbjct: 677 RFVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDSLAAGNEPIGVQDGSFARNYL 736
Query: 777 IQELNVAESRIISLKSQDEYVNALKLGSAGGGVAAIVDELPYIEVFMSYTKCEFKTVGPE 598
I ELN+AESR++ LKSQ+EY L+LG GGVAAIVDELPYIE+F+S + C FK VG E
Sbjct: 737 IDELNIAESRLVILKSQEEYSTFLQLGPNRGGVAAIVDELPYIELFLSASNCAFKIVGQE 796
Query: 597 FTKSGWGFAFQRDSPLATDLSTAILQLSENGDLQKIHDKWLSLAGCSTQGNELIDANRLS 418
FTKSGWGFAFQRDSPLA DLSTAILQLSENGDLQKIH+KWL+ A CS QGNE ID N LS
Sbjct: 797 FTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHNKWLTHADCSAQGNE-IDENHLS 855
Query: 417 LKSFWGLFLICGVACFCALLXXXXXXXXXXXRYSTHVQEEVEVPEIGXXXXXXXXXRATS 238
LKSFWGLFLICG+AC +L+ R++ EE EV EI +TS
Sbjct: 856 LKSFWGLFLICGIACSISLVVFFCNIICQYRRFTPEDGEEAEVDEI-QPPRPQRSVCSTS 914
Query: 237 FKGLLDF 217
K L+ F
Sbjct: 915 LKKLIGF 921