BLASTX nr result
ID: Cimicifuga21_contig00018653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018653
(672 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu... 330 1e-88
ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Viti... 314 9e-84
emb|CBI28943.3| unnamed protein product [Vitis vinifera] 314 9e-84
emb|CAN66741.1| hypothetical protein VITISV_021644 [Vitis vinifera] 314 9e-84
ref|XP_002301627.1| glutamate-gated kainate-type ion channel rec... 311 1e-82
>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
putative [Ricinus communis]
Length = 938
Score = 330 bits (847), Expect = 1e-88
Identities = 160/224 (71%), Positives = 184/224 (82%), Gaps = 1/224 (0%)
Frame = +2
Query: 2 YKAAFSPGASKSAINDLLVGVNLMESRVYVVHVNPDSGLTVFSVAHDLQMMNSGYVWIAT 181
YKAAF+PGA KSAINDLLVGVNLMESRVYVVHVNPDSGL +FSVA L MM+ GYVWIAT
Sbjct: 203 YKAAFTPGAPKSAINDLLVGVNLMESRVYVVHVNPDSGLQIFSVAQSLGMMSKGYVWIAT 262
Query: 182 DWLATVLDSSEPMDLDTMNLLQGVVALRHHTADSTLKKDFISRWNNLQRKGNTS-VSLNS 358
DWL ++LDS EP+D+D MNLLQGVVALRH+T D+ KK F+SRWN+L+ K +T NS
Sbjct: 263 DWLPSLLDSVEPVDIDMMNLLQGVVALRHYTPDTDQKKRFMSRWNSLKNKESTGPAGFNS 322
Query: 359 YGFYAYDSIWLLARALEKFLDEGERISFTNDPRLRDKNGSTLHLSSLRSFLGGQRLLQIL 538
Y YAYDS+WL ARAL+ FL+EG +SF+NDP+L NGS LHL SLR F GGQ+ LQ +
Sbjct: 323 YALYAYDSVWLAARALDAFLNEGGNVSFSNDPKLHHTNGSKLHLESLRIFNGGQQYLQTI 382
Query: 539 TMSNFTGLSGQIQFDSEKNLIHPAYDVLNIGGTGSRNIGYWSNY 670
NFTGL+GQIQFD +KNL+HPAYDVLNIGGTGSR IGYWSNY
Sbjct: 383 LRMNFTGLTGQIQFDDDKNLVHPAYDVLNIGGTGSRRIGYWSNY 426
>ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Vitis vinifera]
Length = 911
Score = 314 bits (805), Expect = 9e-84
Identities = 158/223 (70%), Positives = 180/223 (80%)
Frame = +2
Query: 2 YKAAFSPGASKSAINDLLVGVNLMESRVYVVHVNPDSGLTVFSVAHDLQMMNSGYVWIAT 181
YKAAF+PGA+K+ I+DLL GVNLMESRV+VVHVNPDSGL +FSVA L M+N+GYVWIAT
Sbjct: 197 YKAAFTPGATKNEISDLLAGVNLMESRVFVVHVNPDSGLYIFSVAKVLGMLNNGYVWIAT 256
Query: 182 DWLATVLDSSEPMDLDTMNLLQGVVALRHHTADSTLKKDFISRWNNLQRKGNTSVSLNSY 361
DWL +VLDSSE +D D MN LQGVVALRHH DS KK F SRWN L+ KG + LNSY
Sbjct: 257 DWLPSVLDSSETVDPDQMNQLQGVVALRHHIPDSDRKKSFTSRWNKLKNKGIS--GLNSY 314
Query: 362 GFYAYDSIWLLARALEKFLDEGERISFTNDPRLRDKNGSTLHLSSLRSFLGGQRLLQILT 541
FYAYDS+ L+A AL+ F EG ISF++DP+L D NGS L LS+L +F GGQ+LLQ L
Sbjct: 315 AFYAYDSVSLVAHALDVFFKEGGNISFSSDPKLHDTNGSKLQLSTLHTFDGGQKLLQTLI 374
Query: 542 MSNFTGLSGQIQFDSEKNLIHPAYDVLNIGGTGSRNIGYWSNY 670
+NFTGLSGQIQFD EKNLIHPAYDVLNIGGTG R IGYWSNY
Sbjct: 375 TTNFTGLSGQIQFDLEKNLIHPAYDVLNIGGTGFRRIGYWSNY 417
>emb|CBI28943.3| unnamed protein product [Vitis vinifera]
Length = 1255
Score = 314 bits (805), Expect = 9e-84
Identities = 158/223 (70%), Positives = 180/223 (80%)
Frame = +2
Query: 2 YKAAFSPGASKSAINDLLVGVNLMESRVYVVHVNPDSGLTVFSVAHDLQMMNSGYVWIAT 181
YKAAF+PGA+K+ I+DLL GVNLMESRV+VVHVNPDSGL +FSVA L M+N+GYVWIAT
Sbjct: 210 YKAAFTPGATKNEISDLLAGVNLMESRVFVVHVNPDSGLYIFSVAKVLGMLNNGYVWIAT 269
Query: 182 DWLATVLDSSEPMDLDTMNLLQGVVALRHHTADSTLKKDFISRWNNLQRKGNTSVSLNSY 361
DWL +VLDSSE +D D MN LQGVVALRHH DS KK F SRWN L+ KG + LNSY
Sbjct: 270 DWLPSVLDSSETVDPDQMNQLQGVVALRHHIPDSDRKKSFTSRWNKLKNKGIS--GLNSY 327
Query: 362 GFYAYDSIWLLARALEKFLDEGERISFTNDPRLRDKNGSTLHLSSLRSFLGGQRLLQILT 541
FYAYDS+ L+A AL+ F EG ISF++DP+L D NGS L LS+L +F GGQ+LLQ L
Sbjct: 328 AFYAYDSVSLVAHALDVFFKEGGNISFSSDPKLHDTNGSKLQLSTLHTFDGGQKLLQTLI 387
Query: 542 MSNFTGLSGQIQFDSEKNLIHPAYDVLNIGGTGSRNIGYWSNY 670
+NFTGLSGQIQFD EKNLIHPAYDVLNIGGTG R IGYWSNY
Sbjct: 388 TTNFTGLSGQIQFDLEKNLIHPAYDVLNIGGTGFRRIGYWSNY 430
>emb|CAN66741.1| hypothetical protein VITISV_021644 [Vitis vinifera]
Length = 949
Score = 314 bits (805), Expect = 9e-84
Identities = 158/223 (70%), Positives = 180/223 (80%)
Frame = +2
Query: 2 YKAAFSPGASKSAINDLLVGVNLMESRVYVVHVNPDSGLTVFSVAHDLQMMNSGYVWIAT 181
YKAAF+PGA+K+ I+DLL GVNLMESRV+VVHVNPDSGL +FSVA L M+N+GYVWIAT
Sbjct: 210 YKAAFTPGATKNEISDLLAGVNLMESRVFVVHVNPDSGLHIFSVAKVLGMLNNGYVWIAT 269
Query: 182 DWLATVLDSSEPMDLDTMNLLQGVVALRHHTADSTLKKDFISRWNNLQRKGNTSVSLNSY 361
DWL +VLDSSE +D D MN LQGVVALRHH DS KK F SRWN L+ KG + LNSY
Sbjct: 270 DWLPSVLDSSETVDPDQMNQLQGVVALRHHIPDSDRKKSFTSRWNKLKNKGIS--GLNSY 327
Query: 362 GFYAYDSIWLLARALEKFLDEGERISFTNDPRLRDKNGSTLHLSSLRSFLGGQRLLQILT 541
FYAYDS+ L+A AL+ F EG ISF++DP+L D NGS L LS+L +F GGQ+LLQ L
Sbjct: 328 AFYAYDSVSLVAHALDVFFKEGGNISFSSDPKLHDTNGSKLQLSTLHTFDGGQKLLQTLI 387
Query: 542 MSNFTGLSGQIQFDSEKNLIHPAYDVLNIGGTGSRNIGYWSNY 670
+NFTGLSGQIQFD EKNLIHPAYDVLNIGGTG R IGYWSNY
Sbjct: 388 TTNFTGLSGQIQFDLEKNLIHPAYDVLNIGGTGFRRIGYWSNY 430
>ref|XP_002301627.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222843353|gb|EEE80900.1|
glutamate-gated kainate-type ion channel receptor
subunit GluR5 [Populus trichocarpa]
Length = 956
Score = 311 bits (796), Expect = 1e-82
Identities = 150/224 (66%), Positives = 179/224 (79%), Gaps = 1/224 (0%)
Frame = +2
Query: 2 YKAAFSPGASKSAINDLLVGVNLMESRVYVVHVNPDSGLTVFSVAHDLQMMNSGYVWIAT 181
YKAA +P AS+S I+DLL+ VN MESRVYVVHVNPDSGL++FS A L MM GYVWIAT
Sbjct: 223 YKAALAPRASRSQISDLLLKVNQMESRVYVVHVNPDSGLSLFSTAKSLHMMTKGYVWIAT 282
Query: 182 DWLATVLDSSEPMDLDTMNLLQGVVALRHHTADSTLKKDFISRWNNLQRKGNTSVS-LNS 358
DWL +VLD+ EP D DTMNLLQGV+ALRHHT D+ LKK F+S+W++L K + S NS
Sbjct: 283 DWLPSVLDALEPDDTDTMNLLQGVIALRHHTQDTDLKKKFMSKWSSLNHKNSIGASGFNS 342
Query: 359 YGFYAYDSIWLLARALEKFLDEGERISFTNDPRLRDKNGSTLHLSSLRSFLGGQRLLQIL 538
Y YAYD++WL ARAL+ FL+EG +S+++DP+L D NGS L+LSS+R F GGQ LQ L
Sbjct: 343 YALYAYDTVWLAARALDVFLNEGRNLSYSSDPKLNDTNGSALNLSSMRIFDGGQEFLQTL 402
Query: 539 TMSNFTGLSGQIQFDSEKNLIHPAYDVLNIGGTGSRNIGYWSNY 670
NFTGLSGQIQFD +KNL+HPAYDVLNIGGTGSR IGYWS+Y
Sbjct: 403 LRMNFTGLSGQIQFDMDKNLVHPAYDVLNIGGTGSRRIGYWSDY 446