BLASTX nr result

ID: Cimicifuga21_contig00018652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018652
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33170.3| unnamed protein product [Vitis vinifera]              112   6e-23
ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852...   111   1e-22
emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]   111   1e-22
ref|XP_002312064.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   104   2e-20

>emb|CBI33170.3| unnamed protein product [Vitis vinifera]
          Length = 997

 Score =  112 bits (281), Expect = 6e-23
 Identities = 85/236 (36%), Positives = 102/236 (43%), Gaps = 11/236 (4%)
 Frame = +2

Query: 47   SLQMASYKLIPSXXXXXXXXXXXXXXXXXVASARILDEELPLVPTSVPDPSDPTESDVAP 226
            S QMA  KL+                     SAR+L+E+ P +P S+   S+  +  VA 
Sbjct: 677  SSQMAVQKLVSFSAKAVAYLLLLTVTIAFSTSARVLEEQ-PELPISLSGASNSVQQPVAG 735

Query: 227  VAAXXXXXXXXXXXXXXXXXXXXXXXXXAPPTVTQPIPNPAASTSATVS----------N 376
            VA                          A P V QP P  AA+ +  V+          N
Sbjct: 736  VAPI------------------------ATPAVAQPNPGVAAAATPAVAQPNPGAAAQPN 771

Query: 377  TGPVGKPVTGVAPVATPSVT-QPIANPXXXXXXXXXXXDPHHTLSFFMHDILGGSNPSAK 553
             G   +P  G A    P V  QP  NP              H LSFFMHDILGGSNPSA+
Sbjct: 772  PGAAAQPNPGAAVQPNPGVAAQP--NPGAVAATSGGMAHDDHPLSFFMHDILGGSNPSAR 829

Query: 554  AVTGIVTNPAANGQLPFSKPNGAVLXXXXXXXXXXXXXXXXXXXXLPFLTGLGGNT 721
            AVTGIVTNPA NGQ+PF+KPNGA+L                    +PFLTGL G T
Sbjct: 830  AVTGIVTNPAVNGQVPFAKPNGALLPVNNGVPLNSGNSGLINNNNIPFLTGLSGIT 885


>ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852526 [Vitis vinifera]
          Length = 358

 Score =  111 bits (278), Expect = 1e-22
 Identities = 79/205 (38%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
 Frame = +2

Query: 140 SARILDEELPLVPTSVPDPSDPTESDVAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXAPP 319
           SAR+L+E+ P +P S+   S+  +  VA VA                          A P
Sbjct: 29  SARVLEEQ-PELPISLSGASNSVQQPVAGVAPI------------------------ATP 63

Query: 320 TVTQPIPNPAASTSATVS----------NTGPVGKPVTGVAPVATPSVT-QPIANPXXXX 466
            V QP P  AA+ +  V+          N G   +P  G A    P V  QP  NP    
Sbjct: 64  AVAQPNPGVAAAATPAVAQPNPGAAAQPNPGAAAQPNPGAAVQPNPGVAAQP--NPGAVA 121

Query: 467 XXXXXXXDPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAANGQLPFSKPNGAVLXXXXXX 646
                     H LSFFMHDILGGSNPSA+AVTGIVTNPA NGQ+PF+KPNGA+L      
Sbjct: 122 ATSGGMAHDDHPLSFFMHDILGGSNPSARAVTGIVTNPAVNGQVPFAKPNGALLPVNNGV 181

Query: 647 XXXXXXXXXXXXXXLPFLTGLGGNT 721
                         +PFLTGL G T
Sbjct: 182 PLNSGNSGLINNNNIPFLTGLSGIT 206


>emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]
          Length = 1393

 Score =  111 bits (278), Expect = 1e-22
 Identities = 79/205 (38%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
 Frame = +2

Query: 140  SARILDEELPLVPTSVPDPSDPTESDVAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXAPP 319
            SAR+L+E+ P +P S+   S+  +  VA VA                          A P
Sbjct: 1064 SARVLEEQ-PELPISLSGASNSVQQPVAGVAPI------------------------ATP 1098

Query: 320  TVTQPIPNPAASTSATVS----------NTGPVGKPVTGVAPVATPSVT-QPIANPXXXX 466
             V QP P  AA+ +  V+          N G   +P  G A    P V  QP  NP    
Sbjct: 1099 AVAQPNPGVAAAATPAVAQPNPGAAAQPNPGAAAQPNPGAAVQPNPGVAAQP--NPGAVA 1156

Query: 467  XXXXXXXDPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAANGQLPFSKPNGAVLXXXXXX 646
                      H LSFFMHDILGGSNPSA+AVTGIVTNPA NGQ+PF+KPNGA+L      
Sbjct: 1157 ATSGGMAHDDHPLSFFMHDILGGSNPSARAVTGIVTNPAVNGQVPFAKPNGALLPVNNGV 1216

Query: 647  XXXXXXXXXXXXXXLPFLTGLGGNT 721
                          +PFLTGL G T
Sbjct: 1217 PLNSGNSGLINNNNIPFLTGLSGIT 1241


>ref|XP_002312064.1| predicted protein [Populus trichocarpa] gi|222851884|gb|EEE89431.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  105 bits (261), Expect = 1e-20
 Identities = 59/113 (52%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
 Frame = +2

Query: 386 VGKPVTGVAPVATP-SVTQPIANPXXXXXXXXXXXDPHHTLSFFMHDILGGSNPSAKAVT 562
           V   VT V P+ TP + TQP  NP           +P HTLSFFMHDILGG+NPSA+AVT
Sbjct: 50  VDDTVTSVPPLPTPLAPTQP--NPTGAASTSATISNPGHTLSFFMHDILGGTNPSARAVT 107

Query: 563 GIVTNPAANGQLPFSKPNGAVLXXXXXXXXXXXXXXXXXXXXLPFLTGLGGNT 721
           GIV+NPA +GQ+PF+KPNGA L                    LPFLTGLGG T
Sbjct: 108 GIVSNPAVSGQVPFAKPNGANLPINNGVPQNSNNNGLINNNNLPFLTGLGGTT 160


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  104 bits (259), Expect = 2e-20
 Identities = 59/112 (52%), Positives = 63/112 (56%)
 Frame = +2

Query: 386  VGKPVTGVAPVATPSVTQPIANPXXXXXXXXXXXDPHHTLSFFMHDILGGSNPSAKAVTG 565
            V  PV+ V  VAT         P           D HHTLSFFMHDILGGSNPSA AVTG
Sbjct: 812  VEXPVSSVTSVATA--------PAAATSTTVTNTDLHHTLSFFMHDILGGSNPSAGAVTG 863

Query: 566  IVTNPAANGQLPFSKPNGAVLXXXXXXXXXXXXXXXXXXXXLPFLTGLGGNT 721
            IVTNPA NGQ+PF+KPNGAVL                    +PFLTGL GNT
Sbjct: 864  IVTNPAVNGQVPFAKPNGAVLPVKNGVPLNNGNSALINNNNIPFLTGLSGNT 915


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