BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018649
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    49   1e-06
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    43   6e-06

>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = -3

Query: 164 LQNGLPTRANL*MRNIITRPICPRCDNQVETVEHALFHCSEIRQIWYASKL 12
           L + LP R++L  R I   P+CPRC ++ ET+ H    C   +++W+ S L
Sbjct: 343 LNDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGSNL 393



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 223 WKHLWKLDTAQRVKLFLWR 167
           WK +W L T  R K+ LWR
Sbjct: 323 WKKIWSLHTIPRHKVLLWR 341


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 21/47 (44%), Positives = 24/47 (51%)
 Frame = -3

Query: 167 ALQNGLPTRANL*MRNIITRPICPRCDNQVETVEHALFHCSEIRQIW 27
           AL N LP R NL MR +     CP C +Q ET+ H L  C    Q W
Sbjct: 203 ALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCDVTTQSW 249



 Score = 32.0 bits (71), Expect(2) = 6e-06
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 223 WKHLWKLDTAQRVKLFLWR 167
           W+ LWKL+ A + K+F+WR
Sbjct: 184 WRRLWKLNIAAKCKVFMWR 202