BLASTX nr result

ID: Cimicifuga21_contig00018620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018620
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326396.1| predicted protein [Populus trichocarpa] gi|2...    65   5e-16
ref|XP_002519429.1| Uracil permease, putative [Ricinus communis]...    65   7e-15
emb|CAN65774.1| hypothetical protein VITISV_030411 [Vitis vinifera]    63   3e-14
ref|XP_002264940.1| PREDICTED: probable allantoin permease-like ...    63   3e-14
emb|CBI30184.3| unnamed protein product [Vitis vinifera]               63   3e-14

>ref|XP_002326396.1| predicted protein [Populus trichocarpa] gi|222833589|gb|EEE72066.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 65.5 bits (158), Expect(2) = 5e-16
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
 Frame = +1

Query: 214 TWLVCYTTLLGPIGGIVLVD------TNLNVYALYTTNPLGTYYYTRGYNLVAMTA 363
           TWLV Y+ LLGPIGGIVL D      T+L+V  LY+ +P G YYY+ GYNL AM A
Sbjct: 383 TWLVGYSALLGPIGGIVLADYYLIRKTDLSVNDLYSLSPYGAYYYSGGYNLAAMAA 438



 Score = 43.5 bits (101), Expect(2) = 5e-16
 Identities = 25/59 (42%), Positives = 28/59 (47%)
 Frame = +3

Query: 3   GLVTMTSTIFGXXXXXXXXXXXXXXXXXXXXXXXXSPSRFSFIRGALLTALLSIACKPW 179
           GL TM   IFG                        SPS+F+F RGALLTALL IA +PW
Sbjct: 313 GLTTMILAIFGISLATITTNIAANVVAPANALVNLSPSKFTFRRGALLTALLGIAFQPW 371


>ref|XP_002519429.1| Uracil permease, putative [Ricinus communis]
           gi|223541292|gb|EEF42843.1| Uracil permease, putative
           [Ricinus communis]
          Length = 566

 Score = 65.1 bits (157), Expect(2) = 7e-15
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
 Frame = +1

Query: 214 TWLVCYTTLLGPIGGIVLVD------TNLNVYALYTTNPLGTYYYTRGYNLVAMTA 363
           TWLV Y+ LLGPIGGI+L D      TNL+V  LYT +P G YYY+ GYN VA+ A
Sbjct: 442 TWLVGYSALLGPIGGILLADYYLIKRTNLSVKDLYTLSPYGAYYYSGGYNWVAVIA 497



 Score = 40.0 bits (92), Expect(2) = 7e-15
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +3

Query: 108 SPSRFSFIRGALLTALLSIACKPW 179
           SPS+F+F RGALLTALL IA +PW
Sbjct: 407 SPSKFTFRRGALLTALLGIAFQPW 430


>emb|CAN65774.1| hypothetical protein VITISV_030411 [Vitis vinifera]
          Length = 563

 Score = 63.2 bits (152), Expect(2) = 3e-14
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
 Frame = +1

Query: 214 TWLVCYTTLLGPIGGIVLVD------TNLNVYALYTTNPLGTYYYTRGYNLVAMTA 363
           TWLV Y+ LLGPIG I+L D       NL++  LY+ +P G YYY+ GYNL AMTA
Sbjct: 439 TWLVGYSALLGPIGSIILADYYLIHRMNLSINDLYSLSPHGAYYYSGGYNLAAMTA 494



 Score = 40.0 bits (92), Expect(2) = 3e-14
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +3

Query: 108 SPSRFSFIRGALLTALLSIACKPW 179
           SPS+F+F RGALLTALL IA +PW
Sbjct: 404 SPSKFTFRRGALLTALLGIAFQPW 427


>ref|XP_002264940.1| PREDICTED: probable allantoin permease-like [Vitis vinifera]
          Length = 509

 Score = 63.2 bits (152), Expect(2) = 3e-14
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
 Frame = +1

Query: 214 TWLVCYTTLLGPIGGIVLVD------TNLNVYALYTTNPLGTYYYTRGYNLVAMTA 363
           TWLV Y+ LLGPIG I+L D       NL++  LY+ +P G YYY+ GYNL AMTA
Sbjct: 385 TWLVGYSALLGPIGSIILADYYLIHRMNLSINDLYSLSPHGAYYYSGGYNLAAMTA 440



 Score = 40.0 bits (92), Expect(2) = 3e-14
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +3

Query: 108 SPSRFSFIRGALLTALLSIACKPW 179
           SPS+F+F RGALLTALL IA +PW
Sbjct: 350 SPSKFTFRRGALLTALLGIAFQPW 373


>emb|CBI30184.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 63.2 bits (152), Expect(2) = 3e-14
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
 Frame = +1

Query: 214 TWLVCYTTLLGPIGGIVLVD------TNLNVYALYTTNPLGTYYYTRGYNLVAMTA 363
           TWLV Y+ LLGPIG I+L D       NL++  LY+ +P G YYY+ GYNL AMTA
Sbjct: 365 TWLVGYSALLGPIGSIILADYYLIHRMNLSINDLYSLSPHGAYYYSGGYNLAAMTA 420



 Score = 40.0 bits (92), Expect(2) = 3e-14
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +3

Query: 108 SPSRFSFIRGALLTALLSIACKPW 179
           SPS+F+F RGALLTALL IA +PW
Sbjct: 330 SPSKFTFRRGALLTALLGIAFQPW 353