BLASTX nr result

ID: Cimicifuga21_contig00018610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018610
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   139   3e-31
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   135   3e-30
ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago tr...   134   6e-30
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   133   1e-29

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = +2

Query: 2   VVLPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNP 181
           VVLPLYSGLSR DQDL+FSPTPRGKRKV++STNIAETSLTLEGIVYVVDSGFSKQRFYNP
Sbjct: 309 VVLPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNP 368

Query: 182 ISDI*NLVVAPISRQS 229
           ISDI NLVVAPIS+ S
Sbjct: 369 ISDIENLVVAPISKAS 384


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = +2

Query: 2   VVLPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNP 181
           VVLPLYSGLSR DQDL+FSPTPRGKRKV++STNIAETSLTLEGIVYVVDSGFSKQRFYNP
Sbjct: 308 VVLPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNP 367

Query: 182 ISDI*NLVVAPISRQS 229
           ISDI NLVVAPIS+ S
Sbjct: 368 ISDIENLVVAPISKAS 383


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/76 (84%), Positives = 73/76 (96%)
 Frame = +2

Query: 2   VVLPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNP 181
           +VLPLYSGLSR +QDL+FSPTPRGKRK+++STNIAETSLT+EGIVYVVDSGFSKQRFYNP
Sbjct: 310 IVLPLYSGLSRAEQDLVFSPTPRGKRKIVISTNIAETSLTMEGIVYVVDSGFSKQRFYNP 369

Query: 182 ISDI*NLVVAPISRQS 229
           ISD+ NLVVAPIS+ S
Sbjct: 370 ISDVENLVVAPISKAS 385


>ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
           gi|355482757|gb|AES63960.1| ATP-dependent RNA helicase
           dhx8 [Medicago truncatula]
          Length = 701

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/76 (88%), Positives = 71/76 (93%)
 Frame = +2

Query: 2   VVLPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNP 181
           VVLPLYSGL R DQ+L+FSP PRGKRKV++STNIAETSLTLEGIVYVVDSGFSKQRFYNP
Sbjct: 315 VVLPLYSGLPRADQELVFSPAPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNP 374

Query: 182 ISDI*NLVVAPISRQS 229
           ISDI NLVVAPISR S
Sbjct: 375 ISDIENLVVAPISRAS 390


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/76 (84%), Positives = 73/76 (96%)
 Frame = +2

Query: 2   VVLPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNP 181
           +VLPLYSGLSR +QDLIFSPTPRGKRKV++STNIAETSLTLEGIVYV+DSGFSKQRFYNP
Sbjct: 309 IVLPLYSGLSRAEQDLIFSPTPRGKRKVVISTNIAETSLTLEGIVYVIDSGFSKQRFYNP 368

Query: 182 ISDI*NLVVAPISRQS 229
           I+DI +L+VAPIS+ S
Sbjct: 369 ITDIESLIVAPISKAS 384


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