BLASTX nr result

ID: Cimicifuga21_contig00018590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018590
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19072.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vin...   116   2e-24
ref|XP_002893926.1| holocarboxylase synthetase 2 [Arabidopsis ly...   110   2e-22
ref|XP_002878877.1| holocarboxylase synthetase 1 [Arabidopsis ly...   109   3e-22
gb|AAF19230.1|AC007505_6 Putative biotin holocarboxylase synthet...   108   3e-22

>emb|CBI19072.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/99 (62%), Positives = 76/99 (76%)
 Frame = +2

Query: 116 GKSSAETEFAQSLKTSNTLKLPEVDGEASIFLQSFKGKSSQDVIEETFEVELYMSSLSTH 295
           GKSSAE EFA+SLK  NTLKLP+ +GE SI L     K      EE F+++L+MSSLST+
Sbjct: 102 GKSSAEIEFAKSLKAKNTLKLPD-NGEVSILLHPEIEKPE----EEPFQMDLFMSSLSTN 156

Query: 296 CFGRFLIWSPRLSSTQDLVSKNFKEIPIGSVCIADVQFK 412
            FGRFLIWSP+L ST D+VS+NF E+PIG+VC+ADVQ K
Sbjct: 157 TFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLK 195


>ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vinifera]
          Length = 327

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/99 (62%), Positives = 76/99 (76%)
 Frame = +2

Query: 116 GKSSAETEFAQSLKTSNTLKLPEVDGEASIFLQSFKGKSSQDVIEETFEVELYMSSLSTH 295
           GKSSAE EFA+SLK  NTLKLP+ +GE SI L     K      EE F+++L+MSSLST+
Sbjct: 13  GKSSAEIEFAKSLKAKNTLKLPD-NGEVSILLHPEIEKPE----EEPFQMDLFMSSLSTN 67

Query: 296 CFGRFLIWSPRLSSTQDLVSKNFKEIPIGSVCIADVQFK 412
            FGRFLIWSP+L ST D+VS+NF E+PIG+VC+ADVQ K
Sbjct: 68  TFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLK 106


>ref|XP_002893926.1| holocarboxylase synthetase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297339768|gb|EFH70185.1| holocarboxylase synthetase 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/99 (57%), Positives = 74/99 (74%)
 Frame = +2

Query: 116 GKSSAETEFAQSLKTSNTLKLPEVDGEASIFLQSFKGKSSQDVIEETFEVELYMSSLSTH 295
           GKSS ET+ A  LK +N LKLP+ + + SIFLQS      +D  +++F + L+M+S+STH
Sbjct: 13  GKSSVETDAATRLKNNNVLKLPD-NTKVSIFLQSEIKNLVKD--DDSFNLSLFMNSISTH 69

Query: 296 CFGRFLIWSPRLSSTQDLVSKNFKEIPIGSVCIADVQFK 412
            FGRFLIWSP LSST D+VS NF EIP+GSVC+ D+QFK
Sbjct: 70  RFGRFLIWSPFLSSTHDVVSHNFSEIPVGSVCVTDIQFK 108


>ref|XP_002878877.1| holocarboxylase synthetase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297324716|gb|EFH55136.1| holocarboxylase synthetase 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/100 (54%), Positives = 75/100 (75%)
 Frame = +2

Query: 113 HGKSSAETEFAQSLKTSNTLKLPEVDGEASIFLQSFKGKSSQDVIEETFEVELYMSSLST 292
           +GKSS ETE A+ LK  N+L LP+ + + S+FL+S      +D  + +F + L+M+S+ T
Sbjct: 49  YGKSSVETEIAKCLKNKNSLTLPD-NTKVSLFLESEAKNLVKD--DGSFNLSLFMNSIIT 105

Query: 293 HCFGRFLIWSPRLSSTQDLVSKNFKEIPIGSVCIADVQFK 412
           H FGRFLIWSPRLSST D+VS+NF E+P+GSVC+ D+QFK
Sbjct: 106 HRFGRFLIWSPRLSSTHDVVSQNFSELPVGSVCVTDIQFK 145


>gb|AAF19230.1|AC007505_6 Putative biotin holocarboxylase synthetase [Arabidopsis thaliana]
          Length = 310

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/101 (56%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
 Frame = +2

Query: 113 HGKSSAETEFAQSLKTSNTLKLPEVDGEASIFLQS-FKGKSSQDVIEETFEVELYMSSLS 289
           +GKSS ET+ A  LK +N LKLP+ + + SIFLQS  K     D  + +F + L+M+S+S
Sbjct: 12  YGKSSVETDTATRLKNNNVLKLPD-NSKVSIFLQSEIKNLVRDD--DSSFNLSLFMNSIS 68

Query: 290 THCFGRFLIWSPRLSSTQDLVSKNFKEIPIGSVCIADVQFK 412
           TH FGRFLIWSP LSST D+VS NF EIP+GSVC++D+Q K
Sbjct: 69  THRFGRFLIWSPYLSSTHDVVSHNFSEIPVGSVCVSDIQLK 109


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