BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018582
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              182   3e-44
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   181   4e-44
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   160   1e-37
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  182 bits (462), Expect = 3e-44
 Identities = 78/114 (68%), Positives = 101/114 (88%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           DV++WTA++NGY K+GQ   A+ LFD+MPE+NAVSWSA+ITGYAQ+GLF+EALELFN+MQ
Sbjct: 178 DVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQ 237

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQGRWIHAYIDKDGTKIDQVLGCSIVDMYA 344
           +AGFRPNH  IVGAL+AC F GALDQGRWIHAY+D++   +D++LG +++DMYA
Sbjct: 238 IAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYA 291



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           D I  TA+++ Y K G  E A  +FD+M +R+  +++++I+G A  G    A+E+F  MQ
Sbjct: 279 DRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQ 338

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQG 263
             G  PN    +  LSAC   G +++G
Sbjct: 339 NEGVCPNEVTFICLLSACSRVGLVEEG 365


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  182 bits (462), Expect = 3e-44
 Identities = 78/114 (68%), Positives = 101/114 (88%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           DV++WTA++NGY K+GQ   A+ LFD+MPE+NAVSWSA+ITGYAQ+GLF+EALELFN+MQ
Sbjct: 153 DVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQ 212

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQGRWIHAYIDKDGTKIDQVLGCSIVDMYA 344
           +AGFRPNH  IVGAL+AC F GALDQGRWIHAY+D++   +D++LG +++DMYA
Sbjct: 213 IAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYA 266



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           D I  TA+++ Y K G  E A  +FD+M +R+  +++++I+G A  G    A+E+F  MQ
Sbjct: 254 DRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQ 313

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQG 263
             G  PN    +  LSAC   G +++G
Sbjct: 314 NEGVCPNEVTFICLLSACSRVGLVEEG 340


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  181 bits (460), Expect = 4e-44
 Identities = 78/114 (68%), Positives = 101/114 (88%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           DVI+WTA++NGYVK+G  E A+ LFDQMPERN VSWSA+ITGY  +G+F+EALELFN++Q
Sbjct: 173 DVITWTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQ 232

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQGRWIHAYIDKDGTKIDQVLGCSIVDMYA 344
           + G RPNHAGIVGAL+AC + G+LD GRWIHAY+D++GT++D+VLG ++VDMYA
Sbjct: 233 LTGLRPNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYA 286



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 52/87 (59%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           D +  TA+V+ Y K G  E A  +F++MP+++A +++++I+G A  G   +A++LF  MQ
Sbjct: 274 DRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQ 333

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQG 263
                PN    +  LSAC   G +D+G
Sbjct: 334 SEKVIPNEVTFICVLSACSRMGLVDEG 360


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  160 bits (404), Expect = 1e-37
 Identities = 71/114 (62%), Positives = 93/114 (81%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           DVI+WTA++NGYV+ GQ    + LFD+MPERN+VSWSA+ITGY +VG F+EALELFN M 
Sbjct: 176 DVITWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAML 235

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQGRWIHAYIDKDGTKIDQVLGCSIVDMYA 344
           ++GF PNHAGIV A++AC   GALDQGRWIH YI ++   +D+V+G +++DMYA
Sbjct: 236 ISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYA 289


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  154 bits (389), Expect = 7e-36
 Identities = 66/114 (57%), Positives = 91/114 (79%)
 Frame = +3

Query: 3   DVISWTAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQ 182
           DV++WT +++GY+ +GQ   A+ LFD+MPE+N VSW A+I GY ++G FKEALE+F +MQ
Sbjct: 177 DVVTWTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQ 236

Query: 183 VAGFRPNHAGIVGALSACGFFGALDQGRWIHAYIDKDGTKIDQVLGCSIVDMYA 344
           V+GFR N A IVGAL+AC F GALDQGRWIHAY+ +    +D++LG +++DMYA
Sbjct: 237 VSGFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYA 290



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/82 (36%), Positives = 48/82 (58%)
 Frame = +3

Query: 18  TAMVNGYVKNGQTEEAKHLFDQMPERNAVSWSAIITGYAQVGLFKEALELFNEMQVAGFR 197
           TA+++ Y K G  E A  +FD+M +R+  +++ +I+G A     + A++LFN MQ  G  
Sbjct: 283 TALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVV 342

Query: 198 PNHAGIVGALSACGFFGALDQG 263
           PN    V  L+AC   G +D+G
Sbjct: 343 PNEVTFVCVLNACSRMGMVDEG 364