BLASTX nr result
ID: Cimicifuga21_contig00018572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018572
(678 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276047.1| PREDICTED: EIN3-binding F-box protein 1 [Vit... 87 1e-21
ref|XP_004147107.1| PREDICTED: F-box/LRR-repeat protein 20-like ... 74 2e-21
gb|ABI64127.1| putative F-box and leucine-rich repeat protein [J... 79 2e-21
ref|XP_003569947.1| PREDICTED: F-box/LRR-repeat protein 20-like ... 81 3e-21
ref|XP_002513122.1| glucose regulated repressor protein, putativ... 81 4e-21
>ref|XP_002276047.1| PREDICTED: EIN3-binding F-box protein 1 [Vitis vinifera]
Length = 413
Score = 73.9 bits (180), Expect(2) = 1e-21
Identities = 37/60 (61%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +1
Query: 25 VTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKG-CNLRSLYLAGCRLVTDELL 201
+TD+G++ A+G LS+LQSLDVS CRK+TDKG+ AIA+ C+LRSL+LAGCR V D++L
Sbjct: 117 ITDVGLM--AIGRNLSHLQSLDVSYCRKLTDKGLSAIAESCCDLRSLHLAGCRSVNDKVL 174
Score = 55.1 bits (131), Expect(2) = 1e-21
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Frame = +2
Query: 200 CHNLEELGLQGCNKITP------VDGCHHIKSLDTSTCGNVGDAGILSVT 331
CHNLEELGLQGC IT V GC +K LD + C N+ D G+ SV+
Sbjct: 181 CHNLEELGLQGCTYITDSGLTFLVKGCQRMKFLDINKCSNISDIGVCSVS 230
Score = 87.4 bits (215), Expect(2) = 5e-21
Identities = 50/127 (39%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Frame = +2
Query: 197 CCHNLEELGLQGCNKITPVD------GCHHIKSLDTSTCGNVGDAGILSVTK-------- 334
C H+L+ L + C I+ + C ++++LD C V DA + K
Sbjct: 287 CSHSLKNLRMDWCLNISDLSLNCIFCNCRNLEALDIGCCEEVTDAAFQGLNKGGSKLGLK 346
Query: 335 ----MNPXXXXXXXXXXXXXXXKSLEYLDVRSCPNVTKVSCYQAGLQFPDCCKVNFTGSL 502
N SLEYLDVRSCP+VT+ C QAGLQFP+CCKVNF GSL
Sbjct: 347 VLKVSNCPKITVAGIGLLLDSCNSLEYLDVRSCPHVTEAGCDQAGLQFPECCKVNFLGSL 406
Query: 503 SELDVVV 523
SE DV+V
Sbjct: 407 SEPDVLV 413
Score = 39.7 bits (91), Expect(2) = 5e-21
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 VTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVTDE 195
++DIG+ V++ S L++L + +C KV D+ + ++A+ C NL +L + GCR ++DE
Sbjct: 221 ISDIGVCSVSISCSCS-LKTLKLLDCYKVGDESVLSLAQFCKNLETLIIGGCRDISDE 277
>ref|XP_004147107.1| PREDICTED: F-box/LRR-repeat protein 20-like [Cucumis sativus]
gi|449503502|ref|XP_004162034.1| PREDICTED:
F-box/LRR-repeat protein 20-like [Cucumis sativus]
Length = 421
Score = 72.4 bits (176), Expect(2) = 2e-21
Identities = 37/61 (60%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 22 AVTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVTDEL 198
+++D G+ A+G+GLS LQSLDVS CRK+TDKG A+A+GC ++R+L LAGC+LVTD L
Sbjct: 125 SISDSGLA--AIGSGLSKLQSLDVSYCRKLTDKGFSAVAEGCRDIRNLNLAGCKLVTDGL 182
Query: 199 L 201
L
Sbjct: 183 L 183
Score = 56.2 bits (134), Expect(2) = 2e-21
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Frame = +2
Query: 200 CHNLEELGLQGCNKITP------VDGCHHIKSLDTSTCGNVGDAGILSVTK 334
CH+LEELGL GC IT V GC I+ LD + C NVGD G+ SV+K
Sbjct: 190 CHSLEELGLHGCTNITDSGLRELVKGCQKIEILDVNKCSNVGDVGVSSVSK 240
Score = 74.3 bits (181), Expect(2) = 1e-15
Identities = 49/129 (37%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Frame = +2
Query: 185 LLMNCCHNLEELGLQGCNKITPVD------GCHHIKSLDTSTCGNVGDAGI--------- 319
L + C NL L + C IT C ++++LD C V DA
Sbjct: 291 LALACKSNLRTLRMDWCLNITDSSLSCIFTHCSNLEALDIGCCEEVTDAAFHSLGSDGIE 350
Query: 320 --LSVTKM-NPXXXXXXXXXXXXXXXKSLEYLDVRSCPNVTKVSCYQAGLQFPDCCKVNF 490
L V K+ N SLEYLDVRSCP++TK C +AGLQFP CKVNF
Sbjct: 351 VNLKVLKISNCPKITLATISILVDSCNSLEYLDVRSCPHITKAGCDEAGLQFPASCKVNF 410
Query: 491 TGSLSELDV 517
GSL E D+
Sbjct: 411 AGSLCEPDL 419
Score = 34.3 bits (77), Expect(2) = 1e-15
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 19 TAVTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKGC--NLRSLYLAGCRLVTD 192
T +TD G+ L G ++ LDV+ C V D G+ +++K C +L++ L C + D
Sbjct: 202 TNITDSGLR--ELVKGCQKIEILDVNKCSNVGDVGVSSVSKACSSSLKTFKLLDCYKIKD 259
Query: 193 E 195
+
Sbjct: 260 D 260
>gb|ABI64127.1| putative F-box and leucine-rich repeat protein [Jatropha curcas]
Length = 407
Score = 72.8 bits (177), Expect(2) = 2e-21
Identities = 39/60 (65%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +1
Query: 25 VTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVTDELL 201
+TD GM ++G GLS LQSLDVS CRK+TDKG+ A+A+GC +L+SL+LAGCRL+TD LL
Sbjct: 112 ITDSGMR--SIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLL 169
Score = 55.8 bits (133), Expect(2) = 2e-21
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Frame = +2
Query: 188 LMNCCHNLEELGLQGCNKITP------VDGCHHIKSLDTSTCGNVGDAGILSVTK 334
L N CH L++LGLQGC IT V GC I+ LD + C N+GD GI +++K
Sbjct: 172 LSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSK 226
Score = 79.3 bits (194), Expect(2) = 2e-17
Identities = 51/117 (43%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Frame = +2
Query: 200 CHNLEELGLQGCNKITPV--DGCHHIKS------LDTSTCGNVGDAGI-LSVTKMNPXXX 352
C NLE L + C +IT G IK+ L S C + GI + + K N
Sbjct: 308 CRNLEALDIGCCEEITDAAFQGLATIKTELGLKILKVSNCPKITVTGIGMLLEKCN---- 363
Query: 353 XXXXXXXXXXXXKSLEYLDVRSCPNVTKVSCYQAGLQFPDCCKVNFTGSLSELDVVV 523
LEYLDVRSCP+VTK C +AGLQFP CCKVN+TGSL+E DV+V
Sbjct: 364 -------------GLEYLDVRSCPHVTKSGCDEAGLQFPKCCKVNYTGSLNEPDVLV 407
Score = 35.8 bits (81), Expect(2) = 2e-17
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +1
Query: 70 SYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVTD 192
S L++L + +C KV D+ + ++AK C NL +L + GCR ++D
Sbjct: 230 SCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISD 271
>ref|XP_003569947.1| PREDICTED: F-box/LRR-repeat protein 20-like [Brachypodium
distachyon]
Length = 421
Score = 73.6 bits (179), Expect(2) = 3e-21
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +1
Query: 13 NSTAVTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVT 189
N +TD+G++ LG+GL LQSLDVS+CRK++D+G++ +A GC NLR L + GCRL+T
Sbjct: 118 NCKGITDVGIIK--LGDGLPCLQSLDVSHCRKLSDRGLKVVALGCRNLRQLQITGCRLIT 175
Query: 190 DELL 201
D LL
Sbjct: 176 DNLL 179
Score = 54.3 bits (129), Expect(2) = 3e-21
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +2
Query: 200 CHNLEELGLQGCNKITPV------DGCHHIKSLDTSTCGNVGDAGILSVTKMN 340
C NLEELG GC+ IT DGCH+++SLD S C VGD GI + +++
Sbjct: 186 CLNLEELGAVGCSSITDAGISALADGCHNLRSLDISKCNKVGDPGICKIAEVS 238
Score = 81.3 bits (199), Expect(2) = 9e-19
Identities = 51/128 (39%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Frame = +2
Query: 185 LLMNCCHNLEELGLQGCNKITPVD------GCHHIKSLDTSTCGNVGDA--------GIL 322
L + CC +L L + C KIT C + ++D C + DA G L
Sbjct: 287 LALACCSSLRNLRMDWCLKITDASLISLLCNCKLLAAIDVGCCDQITDAAFQGMESNGFL 346
Query: 323 SVTKM----NPXXXXXXXXXXXXXXXKSLEYLDVRSCPNVTKVSCYQAGLQFPDCCKVNF 490
S ++ N K+LEYLDVRSCP VTK +C QAGLQFP CKVNF
Sbjct: 347 SELRVLKTNNCVRLTVAGVSSVVESCKALEYLDVRSCPQVTKQNCEQAGLQFPAGCKVNF 406
Query: 491 TGSLSELD 514
GSLSE D
Sbjct: 407 EGSLSESD 414
Score = 38.1 bits (87), Expect(2) = 9e-19
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 28/87 (32%)
Frame = +1
Query: 19 TAVTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKG------------------ 144
+++TD G+ AL +G L+SLD+S C KV D G+ IA+
Sbjct: 198 SSITDAGIS--ALADGCHNLRSLDISKCNKVGDPGICKIAEVSSSSLVSLRLLDCIKVGD 255
Query: 145 ----------CNLRSLYLAGCRLVTDE 195
CNL +L + GCR V+D+
Sbjct: 256 KSIHSLAKFCCNLETLVIGGCRDVSDK 282
>ref|XP_002513122.1| glucose regulated repressor protein, putative [Ricinus communis]
gi|223548133|gb|EEF49625.1| glucose regulated repressor
protein, putative [Ricinus communis]
Length = 407
Score = 73.6 bits (179), Expect(2) = 4e-21
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +1
Query: 13 NSTAVTDIGMVMVALGNGLSYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVT 189
N +TD GM ++G GLS LQSLDVS CRK+TDKG+ A+A GC +LR L+LAGCR +T
Sbjct: 108 NCKGITDNGMR--SIGCGLSSLQSLDVSYCRKLTDKGLSAVAGGCRDLRILHLAGCRFIT 165
Query: 190 DELL 201
DE+L
Sbjct: 166 DEVL 169
Score = 53.9 bits (128), Expect(2) = 4e-21
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Frame = +2
Query: 188 LMNCCHNLEELGLQGCNKITP------VDGCHHIKSLDTSTCGNVGDAGILSVTK 334
L C NL+ELGLQGC IT V GC I+ LD + C N+GD GI +++K
Sbjct: 172 LSTSCSNLQELGLQGCTNITDSGVKDLVSGCKQIQFLDINKCSNIGDVGISNLSK 226
Score = 81.3 bits (199), Expect(2) = 2e-18
Identities = 50/136 (36%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Frame = +2
Query: 170 QDADWLLMNCCHNLEELGLQGCNKITP------VDGCHHIKSLDTSTCGNVGDAGI---- 319
Q L C ++L+ L + C I+ + C ++++LD C V DA
Sbjct: 272 QSVKLLASACTNSLKNLRMDWCLNISDSSLSCILTECRNLEALDIGCCEEVTDAAFQVLG 331
Query: 320 -------LSVTKM-NPXXXXXXXXXXXXXXXKSLEYLDVRSCPNVTKVSCYQAGLQFPDC 475
L V K+ N LEYLDVRSCP+VTK C +AGLQFP+C
Sbjct: 332 TVENKLKLKVLKISNCPKITVTGIGRLLEKCNVLEYLDVRSCPHVTKSGCEEAGLQFPEC 391
Query: 476 CKVNFTGSLSELDVVV 523
CKVN+TGSL+E DV++
Sbjct: 392 CKVNYTGSLNEPDVLI 407
Score = 37.0 bits (84), Expect(2) = 2e-18
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 70 SYLQSLDVSNCRKVTDKGMEAIAKGC-NLRSLYLAGCRLVTDE 195
S L++L + +C KV D+ + ++AK C NL +L + GCR ++D+
Sbjct: 230 SCLKTLKLLDCYKVGDESLSSLAKFCNNLETLIIGGCRDISDQ 272