BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018570
         (1854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   551   e-154
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   494   e-137
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   489   e-135
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi...   483   e-134
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi...   481   e-133

>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  551 bits (1419), Expect = e-154
 Identities = 272/402 (67%), Positives = 324/402 (80%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1651 IFHSPSLSNAKTTFDSIISTSHFPLGVRHHNALLKSFAQIATVQDSFSFLQHMITSHPSF 1472
            IF+SP+L +AK  F SI +TS  PL +R HNALL+S++ I+TV DS SFL+HMI S PSF
Sbjct: 68   IFNSPNLLDAKKLFASITTTSTTPLDLRFHNALLQSYSSISTVNDSISFLRHMIKSQPSF 127

Query: 1471 IPDRFTYNILLTQSCKSPSDEDLSSVLNAIDLMVTNGCPPDHVSTDFAIRSLCSVGREDH 1292
             P+R TY+ILL+QSCKSP+  DLS+V   ++LMVT+G PPD V+TD A+RSLCS GRE+H
Sbjct: 128  SPERSTYHILLSQSCKSPNS-DLSAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAGREEH 186

Query: 1291 AIELVKELSLKYSAPDSYTYNFLIRHLCKVRSLPTVYNFIKEM-TAVKVKPDVFTYTILI 1115
            AIELVKELSLK+S PDS+TYNF+IRHLCK R+L TVYNFI E+  + ++KPD+ TYTILI
Sbjct: 187  AIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTILI 246

Query: 1114 ENACKGKNLREATWLLGVLGETGFKPDCYLYNTIMKGYCMLDRGSEVLCVYKKMKEHGVE 935
            +N C GKNLREAT LL VLGE GFKPDCY+YNTIMKGYC+LD+GSE + VYKKMKE GVE
Sbjct: 247  DNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVE 306

Query: 934  PDLVTYNTLVYGLSKVGRVEEARKFLGVMAEMGHFPDTITYTSLMNGMCRKGDALGALAL 755
            PDLVTYNTL++GLSK GRV+EARKFL +MAEMGHFPD +TYTSLMNG+CR+G+ALGALAL
Sbjct: 307  PDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALAL 366

Query: 754  LSRMEENGCTPNPCTYNTLLHXXXXXXXXXXXXXXXXLMKSSDMKLEASSYATLVRALCR 575
            L  ME  GC+PN CTYNTLLH                +MKS  MKLE +SYAT VRALC+
Sbjct: 367  LEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCK 426

Query: 574  EDRIAEAYEVFDYAVESKSLTDVAAYSALESTLKWAKKVQEQ 449
            E R+AEAYE FDY VESKS  DV AYS LE++LKW +K +EQ
Sbjct: 427  EGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAREQ 468


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  494 bits (1273), Expect = e-137
 Identities = 253/465 (54%), Positives = 323/465 (69%), Gaps = 1/465 (0%)
 Frame = -3

Query: 1840 MGKLPPSLRSANPLNAFKHXXXXXXXXXXXPHRPHFXXXXXXXXXXXXXXXKTLXXXXXX 1661
            MGK+PPSLRSA    A                +PH+                        
Sbjct: 1    MGKVPPSLRSAVSTTALLRKPNPFPPP----EKPHYLSKKTKLQLSQKIPTPI------Q 50

Query: 1660 XXPIFHSPSLSNAKTTFDSIISTSHFPLGVRHHNALLKSFAQIATVQDSFSFLQHMITSH 1481
               +F SP L+ AK  F+S+IST+  PL +R H++ L+S++ I+T+ DS S L+HMI + 
Sbjct: 51   QKRLFKSPELNEAKEIFNSLISTTRVPLDLRFHHSFLQSYSSISTIDDSISLLRHMIKTL 110

Query: 1480 PSFIPDRFTYNILLTQSCKSPSDEDLSSVLNAIDLMVTNGCPPDHVSTDFAIRSLCSVGR 1301
            PSF P   TY+ILL+QSCK+P D  LS V   ++LMV NG  P  V+ D A+R+LCS G+
Sbjct: 111  PSFTPTISTYHILLSQSCKAP-DPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGK 169

Query: 1300 EDHAIELVKELSLKYSAPDSYTYNFLIRHLCKVRSLPTVYNFIKEM-TAVKVKPDVFTYT 1124
            ED A++LVKELSLK+S PDS+TYNFL++ LCK R+L  VY+FI EM ++  ++P++ TYT
Sbjct: 170  EDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYT 229

Query: 1123 ILIENACKGKNLREATWLLGVLGETGFKPDCYLYNTIMKGYCMLDRGSEVLCVYKKMKEH 944
            ILI+N C  KNLREA  LLG+L E GFKPDC++YNTIMKGYCML +GS+ + V+KKMKE 
Sbjct: 230  ILIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEE 289

Query: 943  GVEPDLVTYNTLVYGLSKVGRVEEARKFLGVMAEMGHFPDTITYTSLMNGMCRKGDALGA 764
            G+EPDL+TYNTL++GLSK GRV EA+++L +M E GHFPD +TYTSLMNG+CRKGDALGA
Sbjct: 290  GIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGA 349

Query: 763  LALLSRMEENGCTPNPCTYNTLLHXXXXXXXXXXXXXXXXLMKSSDMKLEASSYATLVRA 584
            LALL  ME  GC+PN CTYNTLL+                ++K   M L+ +SYAT VRA
Sbjct: 350  LALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRA 409

Query: 583  LCREDRIAEAYEVFDYAVESKSLTDVAAYSALESTLKWAKKVQEQ 449
            LCRE ++AEAYEVFDYAVESKSLT+ AAY+ LESTLKW KK +EQ
Sbjct: 410  LCREGKVAEAYEVFDYAVESKSLTNAAAYTTLESTLKWLKKAREQ 454


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355520709|gb|AET01163.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  489 bits (1258), Expect = e-135
 Identities = 255/469 (54%), Positives = 319/469 (68%), Gaps = 5/469 (1%)
 Frame = -3

Query: 1840 MGKLPPSLRSA--NPLNAFKHXXXXXXXXXXXPHRPHFXXXXXXXXXXXXXXXKTLXXXX 1667
            MGK+PPS RSA  NP N                H P+                ++     
Sbjct: 1    MGKIPPSFRSALSNP-NLIHRSSSLIPSSPKPHHFPNKTRKPHQKQQQSQSQSQS----- 54

Query: 1666 XXXXPIFHSPSLSNAKTTFDSIISTSHFPLGVRHHNALLKSFAQIATVQDSFSFLQHMIT 1487
                 +F SP+L  AK+ F+S +++S+ P+  R HN+LL+S+A I+T+ DS +FL+HM  
Sbjct: 55   PKPVSVFKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTK 114

Query: 1486 SHPSFIPDRFTYNILLTQSCKSPSDE--DLSSVLNAIDLMVTNGCPPDHVSTDFAIRSLC 1313
            +HPSF PD+ TY+ILLT  CKS   +   LS +   ++LMV++G  PD  + D A+RSLC
Sbjct: 115  THPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLC 174

Query: 1312 SVGREDHAIELVKELSLKYSAPDSYTYNFLIRHLCKVRSLPTVYNFIKEM-TAVKVKPDV 1136
            +  R D A+EL+KELS K+ +PD Y+YNFL+++LCK R+L  VY FI EM T   VKP++
Sbjct: 175  TADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNL 234

Query: 1135 FTYTILIENACKGKNLREATWLLGVLGETGFKPDCYLYNTIMKGYCMLDRGSEVLCVYKK 956
             TYTILI+N C  KNLREAT L+ +L E GFKPDC+LYNTIMKGYCML RGSE + VY +
Sbjct: 235  VTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNR 294

Query: 955  MKEHGVEPDLVTYNTLVYGLSKVGRVEEARKFLGVMAEMGHFPDTITYTSLMNGMCRKGD 776
            MKE GVEPDL+TYNTL++GLSK GRV EA+K L VMAE GHFPD +TYTSLMNGMCRKG+
Sbjct: 295  MKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGE 354

Query: 775  ALGALALLSRMEENGCTPNPCTYNTLLHXXXXXXXXXXXXXXXXLMKSSDMKLEASSYAT 596
             L ALALL  ME  GC+PN CTYNTLLH                 MKS  +KL+ +SYAT
Sbjct: 355  TLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYAT 414

Query: 595  LVRALCREDRIAEAYEVFDYAVESKSLTDVAAYSALESTLKWAKKVQEQ 449
             VRALC   R+A+AYEVFDYAVESKSL+DVAAYS LESTLKW KK +E+
Sbjct: 415  FVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFKKAKEE 463


>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
            [Cucumis sativus]
          Length = 464

 Score =  483 bits (1242), Expect = e-134
 Identities = 245/402 (60%), Positives = 300/402 (74%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1651 IFHSPSLSNAKTTFDSIISTSHFPLGVRHHNALLKSFAQIATVQDSFSFLQHMITSHPSF 1472
            +F S SL++AK  + S +S +  P  +R HN+LL+S+A IAT+ DS SFL+HM    PSF
Sbjct: 60   VFKSASLADAKKLYSSFVSATKAPFNLRVHNSLLQSYASIATLNDSISFLRHMSKVQPSF 119

Query: 1471 IPDRFTYNILLTQSCKSPSDEDLSSVLNAIDLMVTNGCPPDHVSTDFAIRSLCSVGREDH 1292
             PD+ T++ILL+ S   P D  L+SV   ++ MVTNG  PD V+ D A+RSLCSVG  D 
Sbjct: 120  SPDQSTFHILLSTSGNRP-DSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDE 178

Query: 1291 AIELVKELSLKYSAPDSYTYNFLIRHLCKVRSLPTVYNFIKEM-TAVKVKPDVFTYTILI 1115
            A+ELVKELS K++ PD YTYN L++ LCK R+L TVYNFI EM ++   KPD+ TYTILI
Sbjct: 179  AVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYTILI 238

Query: 1114 ENACKGKNLREATWLLGVLGETGFKPDCYLYNTIMKGYCMLDRGSEVLCVYKKMKEHGVE 935
            +N C   NLREA  L+ +L + GFKPDC++YNTIMKGYCM+ RG+E + VYKKMKE G+E
Sbjct: 239  DNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLE 298

Query: 934  PDLVTYNTLVYGLSKVGRVEEARKFLGVMAEMGHFPDTITYTSLMNGMCRKGDALGALAL 755
            PD+VT+NTL++GLSK GRV+EAR FL +MAEMGHFPD +TYTSLMNGMCR+G+ALGAL+L
Sbjct: 299  PDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSL 358

Query: 754  LSRMEENGCTPNPCTYNTLLHXXXXXXXXXXXXXXXXLMKSSDMKLEASSYATLVRALCR 575
            L  ME  GC PN CTYNTLLH                LMKS DMKLE +SY+T VRALCR
Sbjct: 359  LKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRALCR 418

Query: 574  EDRIAEAYEVFDYAVESKSLTDVAAYSALESTLKWAKKVQEQ 449
              RIAEAYEVFDYAVESKSLTDV+AY +LESTLK  K  +EQ
Sbjct: 419  SGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNAREQ 460


>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
            [Cucumis sativus]
          Length = 464

 Score =  481 bits (1239), Expect = e-133
 Identities = 245/402 (60%), Positives = 299/402 (74%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1651 IFHSPSLSNAKTTFDSIISTSHFPLGVRHHNALLKSFAQIATVQDSFSFLQHMITSHPSF 1472
            +F S SL++AK  + S IS +  P  +R HN+LL+S+A IAT+ DS SFL+HM    PSF
Sbjct: 60   VFKSASLADAKKLYSSFISATKAPFNLRVHNSLLQSYASIATLNDSISFLRHMSKVQPSF 119

Query: 1471 IPDRFTYNILLTQSCKSPSDEDLSSVLNAIDLMVTNGCPPDHVSTDFAIRSLCSVGREDH 1292
             PD+ T++ILL+ S   P D  L+SV   ++ MVTNG  PD V+ D A+RSLCSVG  D 
Sbjct: 120  SPDQSTFHILLSTSGNRP-DSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDE 178

Query: 1291 AIELVKELSLKYSAPDSYTYNFLIRHLCKVRSLPTVYNFIKEM-TAVKVKPDVFTYTILI 1115
            A+ELVKELS K++ PD YTYN L++ LCK R+L TVYNFI EM ++   KPD+ TYTILI
Sbjct: 179  AVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYTILI 238

Query: 1114 ENACKGKNLREATWLLGVLGETGFKPDCYLYNTIMKGYCMLDRGSEVLCVYKKMKEHGVE 935
            +N C   NLREA  L+ +L + GFKPDC++YNTIMKGYCM+ RG+E + VYKKMKE G+E
Sbjct: 239  DNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLE 298

Query: 934  PDLVTYNTLVYGLSKVGRVEEARKFLGVMAEMGHFPDTITYTSLMNGMCRKGDALGALAL 755
            PD+VT+NTL++GLSK GRV+EAR FL +MAEMGHFPD +TYTSLMNGMCR+G+ALGAL+L
Sbjct: 299  PDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSL 358

Query: 754  LSRMEENGCTPNPCTYNTLLHXXXXXXXXXXXXXXXXLMKSSDMKLEASSYATLVRALCR 575
            L  ME  GC PN CTYNTLLH                LMKS DMKLE +SY+T VRALCR
Sbjct: 359  LKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRALCR 418

Query: 574  EDRIAEAYEVFDYAVESKSLTDVAAYSALESTLKWAKKVQEQ 449
              RIAEAYE FDYAVESKSLTDV+AY +LESTLK  K  +EQ
Sbjct: 419  SGRIAEAYEAFDYAVESKSLTDVSAYLSLESTLKSLKNAREQ 460