BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018522
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ...   107   8e-22

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/102 (67%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = -3

Query: 303 YPLSLLSRCTSLKELKQIQASIIKSNLQNELSILTKLIKFCALNPSAT-MDYAQHLFDQF 127
           +PLSLL +CTSL+ELKQ+QA  IK++L ++LS+LTK I FC+LNP+ T M +A HLFDQ 
Sbjct: 22  HPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI 81

Query: 126 PQPNIVLFNTMARGYAQTDTPTRSLTLFAKILDLGLYPDDYT 1
           PQP+IVLFNTMARGYA+TDTP R+ TLF +IL  GL+PDDYT
Sbjct: 82  PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYT 123


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = -3

Query: 303 YPLSLLSRCTSLKELKQIQASIIKSNLQNELSILTKLIKFCALNPSAT-MDYAQHLFDQF 127
           +PLSLLS+CTSL ELKQIQA  IK+NLQ+++S+LTKLI FC LNP+ + MD+A HLFDQ 
Sbjct: 31  HPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90

Query: 126 PQPNIVLFNTMARGYAQTDTPTRSLTLFAKILDLGLYPDDYT 1
              +I+LFN MARGYA++++P  + +LF ++L  GL PDDYT
Sbjct: 91  LDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYT 132


>ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|222865177|gb|EEF02308.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/105 (60%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
 Frame = -3

Query: 303 YPLSLLS---RCTSLKELKQIQASIIKSNLQNELSILTKLIKFCALNPS-ATMDYAQHLF 136
           YP SLLS   +CTSLKELKQIQA  IK++LQN+L ILTKLI  C  NP+ A+MDYA  LF
Sbjct: 25  YPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLF 84

Query: 135 DQFPQPNIVLFNTMARGYAQTDTPTRSLTLFAKILDLGLYPDDYT 1
           +  PQP+IVLFN+M RGY++++ P ++++LF K L+  L PDDYT
Sbjct: 85  EAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYT 129


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/100 (60%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -3

Query: 297 LSLLSRCTSLKELKQIQASIIKSNLQNELSILTKLIKFCALNPS-ATMDYAQHLFDQFPQ 121
           LSL+ +CTSL+ELKQIQA  IK++ QN  ++LTKLI FC  NP+ A+MD+A  +FD+ PQ
Sbjct: 39  LSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQ 97

Query: 120 PNIVLFNTMARGYAQTDTPTRSLTLFAKILDLGLYPDDYT 1
           P+IVLFNTMARGYA+ D P R++ L +++L  GL PDDYT
Sbjct: 98  PDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYT 137


>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515122|gb|AES96745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = -3

Query: 297 LSLLSRCTSLKELKQIQASIIKSNLQNELSILTKLIKFCALNPS-ATMDYAQHLFDQFPQ 121
           +SL+ +CT+LKELKQIQA  IK+N QN  +++TK I FC  NP+ A+M++A  LFDQ  Q
Sbjct: 30  ISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQ 89

Query: 120 PNIVLFNTMARGYAQTDTPTRSLTLFAKILDL 25
           PNIVLFNTMARGYA+ + P R +T F + L L
Sbjct: 90  PNIVLFNTMARGYARLNDPLRMITHFRRCLRL 121