BLASTX nr result

ID: Cimicifuga21_contig00018505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018505
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23759.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1...   165   4e-39
ref|XP_002513846.1| serine hydroxymethyltransferase, putative [R...   161   6e-38
gb|ABO61384.1| serine hydroxymethyltransferase [Populus tremuloi...   159   3e-37
ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1...   152   4e-35

>emb|CBI23759.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   LWDLRNLGLTGKNYEKVCELCHITLNKSAIFGDNGAISPGGVRIGTPAMTSRGCLEADFE 182
           LWDLR LGLTGKNYEKVCE+CHITLNK AIFGDNG I+PGGVRIGTPAMTSRGCLEADFE
Sbjct: 228 LWDLRTLGLTGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTSRGCLEADFE 287

Query: 183 TIADFLLKAAQIACLVQREHGKLQKDFL 266
           TIADFLL+AAQIA +VQREHGK+QK FL
Sbjct: 288 TIADFLLRAAQIASVVQREHGKMQKAFL 315


>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
          Length = 577

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   LWDLRNLGLTGKNYEKVCELCHITLNKSAIFGDNGAISPGGVRIGTPAMTSRGCLEADFE 182
           LWDLR LGLTGKNYEKVCE+CHITLNK AIFGDNG I+PGGVRIGTPAMTSRGCLEADFE
Sbjct: 460 LWDLRTLGLTGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTSRGCLEADFE 519

Query: 183 TIADFLLKAAQIACLVQREHGKLQKDFL 266
           TIADFLL+AAQIA +VQREHGK+QK FL
Sbjct: 520 TIADFLLRAAQIASVVQREHGKMQKAFL 547


>ref|XP_002513846.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223546932|gb|EEF48429.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 567

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = +3

Query: 3   LWDLRNLGLTGKNYEKVCELCHITLNKSAIFGDNGAISPGGVRIGTPAMTSRGCLEADFE 182
           LWDL  LGL GKNYEKVCE+CHITLNKSAIFG+NGAI  GGVRIGTPAMTSRGCLE DFE
Sbjct: 450 LWDLTTLGLAGKNYEKVCEMCHITLNKSAIFGENGAICLGGVRIGTPAMTSRGCLEGDFE 509

Query: 183 TIADFLLKAAQIACLVQREHGKLQKDFL 266
           TIADFLL+AAQIAC +QREHGK+QK+FL
Sbjct: 510 TIADFLLRAAQIACAIQREHGKIQKEFL 537


>gb|ABO61384.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 578

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = +3

Query: 3   LWDLRNLGLTGKNYEKVCELCHITLNKSAIFGDNGAISPGGVRIGTPAMTSRGCLEADFE 182
           LWDLR LGLTGK YEKVCELCHIT+NK AIFG+NG I+PGGVRIGTPAMTSRGCLE+DFE
Sbjct: 461 LWDLRPLGLTGKAYEKVCELCHITVNKIAIFGENGTITPGGVRIGTPAMTSRGCLESDFE 520

Query: 183 TIADFLLKAAQIACLVQREHGKLQKDFL 266
           TIADFLLKAA IAC+V REHGKLQK F+
Sbjct: 521 TIADFLLKAAHIACMVLREHGKLQKAFM 548


>ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 566

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/88 (81%), Positives = 79/88 (89%)
 Frame = +3

Query: 3   LWDLRNLGLTGKNYEKVCELCHITLNKSAIFGDNGAISPGGVRIGTPAMTSRGCLEADFE 182
           LWDLR LGLTGK YEKVCE CHITLNK AIFGDNG I PGGVR+GTPAMTSRGCLEADFE
Sbjct: 449 LWDLRPLGLTGKFYEKVCETCHITLNKIAIFGDNGTIIPGGVRVGTPAMTSRGCLEADFE 508

Query: 183 TIADFLLKAAQIACLVQREHGKLQKDFL 266
           T+A+FL++AAQIA ++QREHGKLQK  L
Sbjct: 509 TMAEFLIRAAQIASILQREHGKLQKTTL 536


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